RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 TTC31Q49AM3 519 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 FAM184AQ8NB25 1140 aa8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 ERCC4Q92889 916 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 SUDS3Q9H7L9 328 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 SLC26A8Q96RN1 970 aa8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 NEXNQ0ZGT2 675 aa8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 CENPQQ7L2Z9 268 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 RASSF4Q9H2L5 321 aa8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 ANKRD30BQ9BXX2 1392 aa8.32□□□□□ -1.08
TGFBR3-210ENST00000533089 LIG1P18858 919 aa8.32□□□□□ -1.08
TGFBR3-210ENST00000533089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.32□□□□□ -1.088e-7■■■■■ 191.4
TGFBR3-210ENST00000533089 PROSER2Q86WR7 435 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-210ENST00000533089 C10orf67Q8IYJ2 551 aa8.32□□□□□ -1.08
TGFBR3-210ENST00000533089 GOLGA6L10A6NI86 522 aa8.32□□□□□ -1.08
TGFBR3-210ENST00000533089 SECISBP2LQ93073 1101 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-210ENST00000533089 C9orf78Q9NZ63 289 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-210ENST00000533089 CTTNBP2Q8WZ74 1663 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 ST20-MTHFSA0A0A6YYL1 179 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 ST18O60284 1047 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 ANKRD20A12PQ8NF67 263 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 RBM33Q96EV2 1170 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 ABCC10Q5T3U5 1492 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 USP47Q96K76 1375 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 CCP110O43303 1012 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 TSR1Q2NL82 804 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 TEX2Q8IWB9 1127 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 SPC24Q8NBT2 197 aa8.31□□□□□ -1.08
TGFBR3-210ENST00000533089 CT47B1P0C2W7 299 aaPredicted RBP8.3□□□□□ -1.08
TGFBR3-210ENST00000533089 CCDC43Q96MW1 224 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-210ENST00000533089 NCOA1Q15788 1441 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 ANKRD45Q5TZF3 282 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 DMRT2Q9Y5R5 561 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 PTPN23Q9H3S7 1636 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 UHRF1BP1LA0JNW5 1464 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 TPM1P09493 284 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 PCMTD1Q96MG8 357 aaPredicted RBP8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 TSPY26PQ9H489 355 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 NAIPQ13075 1403 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 GBP2P32456 591 aaPredicted RBP8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 TXLNBQ8N3L3 684 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 EIF3JO75822 258 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 TRIM29Q14134 588 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 LRRFIP1Q32MZ4 808 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 RRAGDQ9NQL2 400 aaPredicted RBP8.29□□□□□ -1.08
TGFBR3-210ENST00000533089 FYB1O15117 783 aa8.28□□□□□ -1.08
TGFBR3-210ENST00000533089 GOLGA6L7A0A1B0GV03 622 aa8.28□□□□□ -1.08
TGFBR3-210ENST00000533089 DZIP1Q86YF9 867 aaKnown RBP8.28□□□□□ -1.08
TGFBR3-210ENST00000533089 KDM4AO75164 1064 aa8.28□□□□□ -1.08
TGFBR3-210ENST00000533089 ZRSR2Q15696 482 aaKnown RBP8.28□□□□□ -1.08
TGFBR3-210ENST00000533089 MYO6Q9UM54 1294 aa8.28□□□□□ -1.08
TGFBR3-210ENST00000533089 KIAA1328Q86T90 577 aa8.27□□□□□ -1.08
TGFBR3-210ENST00000533089 CCDC102AQ96A19 550 aa8.27□□□□□ -1.08
TGFBR3-210ENST00000533089 PANK3Q9H999 370 aa8.27□□□□□ -1.08
TGFBR3-210ENST00000533089 ERBINQ96RT1 1412 aa8.27□□□□□ -1.08
TGFBR3-210ENST00000533089 RRP1P56182 461 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 TMCO3Q6UWJ1 677 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 NFXL1Q6ZNB6 911 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 FAM107BQ9H098 131 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 IFIT2P09913 472 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 TMEM132EQ6IEE7 984 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 KRT222Q8N1A0 295 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 NEBLO76041 1014 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 RPAINQ86UA6 219 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 ZBTB9Q96C00 473 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 PLIN1O60240 522 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 LMAN1P49257 510 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 NUTM2GQ5VZR2 741 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 CRBNQ96SW2 442 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 A2MP01023 1474 aa8.27□□□□□ -1.09
TGFBR3-210ENST00000533089 CPLX2Q6PUV4 134 aaKnown RBP8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 NEO1Q92859 1461 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 A0A1B0GUL7 405 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 DDX58O95786 925 aaKnown RBP8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 GPRASP1Q5JY77 1395 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 RTEL1-TNFRSF6BF6WH68 1400 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 CCDC27Q2M243 656 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 CFAP70Q5T0N1 1121 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 MTMR7Q9Y216 660 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 SHTN1A0MZ66 631 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 ERICH2A1L162 156 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 GBP6Q6ZN66 633 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 RAPGEF4Q8WZA2 1011 aa8.26□□□□□ -1.09
TGFBR3-210ENST00000533089 TNRQ92752 1358 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 CPLX1O14810 134 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 CCDC47Q96A33 483 aaKnown RBP8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 GOLGA6L10A0A0M3HER8 536 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 TRDNQ13061 729 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 PAF1Q8N7H5 531 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 CEBPAP49715 358 aaPredicted RBP8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 SRRTQ9BXP5 876 aaKnown RBP8.25□□□□□ -1.09
TGFBR3-210ENST00000533089 NLRP2Q9NX02 1062 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms