RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
CAPRIN1-212ENST00000532820 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
CAPRIN1-212ENST00000532820 NOB1Q9ULX3 412 aaKnown RBP17.22■□□□□ 0.35
CAPRIN1-212ENST00000532820 PTCH1Q13635 1447 aa17.21■□□□□ 0.35
CAPRIN1-212ENST00000532820 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
CAPRIN1-212ENST00000532820 MAP3K19Q56UN5 1328 aa17.21■□□□□ 0.35
CAPRIN1-212ENST00000532820 DIP2AQ14689 1571 aa17.21■□□□□ 0.35
CAPRIN1-212ENST00000532820 TSPYL6Q8N831 410 aa17.21■□□□□ 0.35
CAPRIN1-212ENST00000532820 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.34
CAPRIN1-212ENST00000532820 PCDHB15Q9Y5E8 787 aa17.21■□□□□ 0.34
CAPRIN1-212ENST00000532820 TRIM27P14373 513 aa17.2■□□□□ 0.34
CAPRIN1-212ENST00000532820 AMPHP49418 695 aa17.19■□□□□ 0.34
CAPRIN1-212ENST00000532820 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
CAPRIN1-212ENST00000532820 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
CAPRIN1-212ENST00000532820 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
CAPRIN1-212ENST00000532820 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
CAPRIN1-212ENST00000532820 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
CAPRIN1-212ENST00000532820 BACH2Q9BYV9 841 aa17.19■□□□□ 0.34
CAPRIN1-212ENST00000532820 IL16Q14005 1332 aa17.19■□□□□ 0.34
CAPRIN1-212ENST00000532820 ZBTB7CA1YPR0 619 aa17.18■□□□□ 0.34
CAPRIN1-212ENST00000532820 MCM10Q7L590 875 aa17.18■□□□□ 0.34
CAPRIN1-212ENST00000532820 ITPRIPQ8IWB1 547 aa17.18■□□□□ 0.34
CAPRIN1-212ENST00000532820 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
CAPRIN1-212ENST00000532820 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
CAPRIN1-212ENST00000532820 ERICH6Q7L0X2 663 aa17.17■□□□□ 0.34
CAPRIN1-212ENST00000532820 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
CAPRIN1-212ENST00000532820 ANP32AP39687 249 aaKnown RBP17.17■□□□□ 0.34
CAPRIN1-212ENST00000532820 ESCO1Q5FWF5 840 aa17.17■□□□□ 0.34
CAPRIN1-212ENST00000532820 FOXO3O43524 673 aa17.16■□□□□ 0.34
CAPRIN1-212ENST00000532820 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
CAPRIN1-212ENST00000532820 SSH2Q76I76 1423 aa17.16■□□□□ 0.34
CAPRIN1-212ENST00000532820 MS4A1P11836 297 aa17.16■□□□□ 0.34
CAPRIN1-212ENST00000532820 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
CAPRIN1-212ENST00000532820 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
CAPRIN1-212ENST00000532820 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
CAPRIN1-212ENST00000532820 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
CAPRIN1-212ENST00000532820 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
CAPRIN1-212ENST00000532820 ANP32EQ9BTT0 268 aa17.14■□□□□ 0.33
CAPRIN1-212ENST00000532820 PHF8Q9UPP1 1060 aa17.14■□□□□ 0.33
CAPRIN1-212ENST00000532820 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
CAPRIN1-212ENST00000532820 MIS18AQ9NYP9 233 aa17.14■□□□□ 0.33
CAPRIN1-212ENST00000532820 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
CAPRIN1-212ENST00000532820 GNAI1P63096 354 aa17.14■□□□□ 0.33
CAPRIN1-212ENST00000532820 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
CAPRIN1-212ENST00000532820 XRN1Q8IZH2 1706 aaKnown RBP17.13■□□□□ 0.33
CAPRIN1-212ENST00000532820 VAMP4O75379 141 aa17.13■□□□□ 0.33
CAPRIN1-212ENST00000532820 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
CAPRIN1-212ENST00000532820 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
CAPRIN1-212ENST00000532820 PEAK1Q9H792 1746 aa17.12■□□□□ 0.33
CAPRIN1-212ENST00000532820 IFT57Q9NWB7 429 aa17.12■□□□□ 0.33
CAPRIN1-212ENST00000532820 PSME1Q06323 249 aa17.12■□□□□ 0.33
CAPRIN1-212ENST00000532820 EYA1Q99502 592 aa17.12■□□□□ 0.33
CAPRIN1-212ENST00000532820 TWISTNBQ3B726 338 aaPredicted RBP17.11■□□□□ 0.33
CAPRIN1-212ENST00000532820 ORAI2Q96SN7 254 aa17.11■□□□□ 0.33
CAPRIN1-212ENST00000532820 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
CAPRIN1-212ENST00000532820 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
CAPRIN1-212ENST00000532820 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
CAPRIN1-212ENST00000532820 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
CAPRIN1-212ENST00000532820 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
CAPRIN1-212ENST00000532820 ZNF853P0CG23 659 aa17.1■□□□□ 0.33
CAPRIN1-212ENST00000532820 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
CAPRIN1-212ENST00000532820 FLT4P35916 1363 aa17.09■□□□□ 0.33
CAPRIN1-212ENST00000532820 IPO9Q96P70 1041 aaKnown RBP17.08■□□□□ 0.33
CAPRIN1-212ENST00000532820 ADAMTSL3P82987 1691 aa17.08■□□□□ 0.32
CAPRIN1-212ENST00000532820 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.32
CAPRIN1-212ENST00000532820 SBNO1A3KN83 1393 aa17.08■□□□□ 0.32
CAPRIN1-212ENST00000532820 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.32
CAPRIN1-212ENST00000532820 KIF16BQ96L93 1317 aa17.07■□□□□ 0.32
CAPRIN1-212ENST00000532820 HOXC9P31274 260 aa17.07■□□□□ 0.32
CAPRIN1-212ENST00000532820 NPHP4O75161 1426 aaPredicted RBP17.07■□□□□ 0.32
CAPRIN1-212ENST00000532820 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
CAPRIN1-212ENST00000532820 C8orf34Q49A92 452 aa17.07■□□□□ 0.32
CAPRIN1-212ENST00000532820 PROSER2Q86WR7 435 aaPredicted RBP17.07■□□□□ 0.32
CAPRIN1-212ENST00000532820 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 MRPL50Q8N5N7 158 aaKnown RBP17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 PDZRN3Q9UPQ7 1066 aa17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 ANKARQ7Z5J8 1434 aa17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 FAM161AQ3B820 660 aa17.06■□□□□ 0.32
CAPRIN1-212ENST00000532820 NALCNQ8IZF0 1738 aa17.05■□□□□ 0.32
CAPRIN1-212ENST00000532820 RTF1Q92541 710 aaKnown RBP17.04■□□□□ 0.32
CAPRIN1-212ENST00000532820 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
CAPRIN1-212ENST00000532820 CHD2O14647 1828 aaKnown RBP17.04■□□□□ 0.32
CAPRIN1-212ENST00000532820 HSPA2P54652 639 aa17.03■□□□□ 0.32
CAPRIN1-212ENST00000532820 FMN2Q9NZ56 1722 aa17.03■□□□□ 0.32
CAPRIN1-212ENST00000532820 DDX17Q92841 729 aaKnown RBP17.02■□□□□ 0.31
CAPRIN1-212ENST00000532820 ZBTB40Q9NUA8 1239 aa17.02■□□□□ 0.31
CAPRIN1-212ENST00000532820 IGSF1Q8N6C5 1336 aa17.01■□□□□ 0.31
CAPRIN1-212ENST00000532820 CHL1O00533 1208 aa17.01■□□□□ 0.31
CAPRIN1-212ENST00000532820 ARHGEF10O15013 1369 aa17.01■□□□□ 0.31
CAPRIN1-212ENST00000532820 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
CAPRIN1-212ENST00000532820 TSPYL4Q9UJ04 414 aa17■□□□□ 0.31
CAPRIN1-212ENST00000532820 NECTIN2Q92692 538 aa17■□□□□ 0.31
CAPRIN1-212ENST00000532820 ZNF142P52746 1687 aaPredicted RBP17■□□□□ 0.31
CAPRIN1-212ENST00000532820 SLC4A3P48751 1232 aa16.99■□□□□ 0.31
CAPRIN1-212ENST00000532820 AAMPQ13685 434 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms