RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
CHEK1-213ENST00000532449 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
CHEK1-213ENST00000532449 DIAPH3Q9NSV4 1193 aa13.09□□□□□ -0.31
CHEK1-213ENST00000532449 CWC27Q6UX04 472 aaKnown RBP13.09□□□□□ -0.31
CHEK1-213ENST00000532449 MEIS3Q99687 375 aa13.09□□□□□ -0.31
CHEK1-213ENST00000532449 CPA1P15085 419 aa13.09□□□□□ -0.31
CHEK1-213ENST00000532449 GORABQ5T7V8 394 aa13.08□□□□□ -0.31
CHEK1-213ENST00000532449 GCC1Q96CN9 775 aa13.08□□□□□ -0.31
CHEK1-213ENST00000532449 CCDC39Q9UFE4 941 aa13.08□□□□□ -0.31
CHEK1-213ENST00000532449 ANXA1P04083 346 aa13.08□□□□□ -0.32
CHEK1-213ENST00000532449 SDSP20132 328 aa13.08□□□□□ -0.32
CHEK1-213ENST00000532449 CKAP2LQ8IYA6 745 aa13.08□□□□□ -0.32
CHEK1-213ENST00000532449 NUCB1Q02818 461 aa13.08□□□□□ -0.32
CHEK1-213ENST00000532449 ERC2O15083 957 aa13.07□□□□□ -0.32
CHEK1-213ENST00000532449 SIL1Q9H173 461 aa13.07□□□□□ -0.32
CHEK1-213ENST00000532449 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
CHEK1-213ENST00000532449 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
CHEK1-213ENST00000532449 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
CHEK1-213ENST00000532449 GIMAP6Q6P9H5 292 aa13.07□□□□□ -0.32
CHEK1-213ENST00000532449 AEBP1Q8IUX7 1158 aa13.07□□□□□ -0.32
CHEK1-213ENST00000532449 MBIPQ9NS73 344 aa13.07□□□□□ -0.32
CHEK1-213ENST00000532449 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHEK1-213ENST00000532449 V9GYY5 206 aaPredicted RBP13.07□□□□□ -0.32
CHEK1-213ENST00000532449 ERICH4A6NGS2 130 aa13.06□□□□□ -0.32
CHEK1-213ENST00000532449 PHF14O94880 888 aa13.06□□□□□ -0.32
CHEK1-213ENST00000532449 SKIDA1Q1XH10 827 aa13.06□□□□□ -0.32
CHEK1-213ENST00000532449 ZBTB40Q9NUA8 1239 aa13.06□□□□□ -0.32
CHEK1-213ENST00000532449 RAB3GAP1Q15042 981 aa13.05□□□□□ -0.32
CHEK1-213ENST00000532449 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
CHEK1-213ENST00000532449 TFIP11Q9UBB9 837 aaKnown RBP13.05□□□□□ -0.32
CHEK1-213ENST00000532449 BMP2KLQ5H9B9 411 aa13.05□□□□□ -0.32
CHEK1-213ENST00000532449 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
CHEK1-213ENST00000532449 A2MP01023 1474 aa13.05□□□□□ -0.32
CHEK1-213ENST00000532449 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
CHEK1-213ENST00000532449 BECN2A8MW95 431 aa13.04□□□□□ -0.32
CHEK1-213ENST00000532449 H3BQV1 296 aa13.04□□□□□ -0.32
CHEK1-213ENST00000532449 KLHL40Q2TBA0 621 aa13.04□□□□□ -0.32
CHEK1-213ENST00000532449 IFFO2Q5TF58 517 aa13.04□□□□□ -0.32
CHEK1-213ENST00000532449 FILIP1Q7Z7B0 1213 aa13.04□□□□□ -0.32
CHEK1-213ENST00000532449 PDCL3Q9H2J4 239 aa13.04□□□□□ -0.32
CHEK1-213ENST00000532449 CIZ1Q9ULV3 898 aaPredicted RBP13.04□□□□□ -0.32
CHEK1-213ENST00000532449 CSPP1Q1MSJ5 1256 aa13.04□□□□□ -0.32
CHEK1-213ENST00000532449 C16orf45Q96MC5 204 aaPredicted RBP13.04□□□□□ -0.32
CHEK1-213ENST00000532449 LMOD3Q0VAK6 560 aa13.03□□□□□ -0.32
CHEK1-213ENST00000532449 FAM173BQ6P4H8 233 aa13.03□□□□□ -0.32
CHEK1-213ENST00000532449 FAM177A1Q8N128 213 aaPredicted RBP13.03□□□□□ -0.32
CHEK1-213ENST00000532449 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
CHEK1-213ENST00000532449 TMX3Q96JJ7 454 aa13.03□□□□□ -0.32
CHEK1-213ENST00000532449 C9orf78Q9NZ63 289 aaPredicted RBP13.03□□□□□ -0.32
CHEK1-213ENST00000532449 FBXO31Q5XUX0 539 aaPredicted RBP13.03□□□□□ -0.32
CHEK1-213ENST00000532449 ZMYM4Q5VZL5 1548 aa13.02□□□□□ -0.32
CHEK1-213ENST00000532449 NOS1P29475 1434 aa13.02□□□□□ -0.32
CHEK1-213ENST00000532449 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.32
CHEK1-213ENST00000532449 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.32
CHEK1-213ENST00000532449 FYB1O15117 783 aa13.02□□□□□ -0.32
CHEK1-213ENST00000532449 SMC5Q8IY18 1101 aa13.02□□□□□ -0.32
CHEK1-213ENST00000532449 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.32
CHEK1-213ENST00000532449 ATP10BO94823 1461 aa13.02□□□□□ -0.33
CHEK1-213ENST00000532449 UBTFL1P0CB47 393 aaPredicted RBP13.02□□□□□ -0.33
CHEK1-213ENST00000532449 NFE2L2Q16236 605 aa13.02□□□□□ -0.33
CHEK1-213ENST00000532449 NECAB1Q8N987 351 aa13.02□□□□□ -0.33
CHEK1-213ENST00000532449 CNPY2Q9Y2B0 182 aa13.02□□□□□ -0.33
CHEK1-213ENST00000532449 ZNF521Q96K83 1311 aa13.02□□□□□ -0.33
CHEK1-213ENST00000532449 COL17A1Q9UMD9 1497 aaPredicted RBP13.02□□□□□ -0.33
CHEK1-213ENST00000532449 ADCY5O95622 1261 aa13.02□□□□□ -0.33
CHEK1-213ENST00000532449 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
CHEK1-213ENST00000532449 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.33
CHEK1-213ENST00000532449 BLMP54132 1417 aaPredicted RBP13.01□□□□□ -0.33
CHEK1-213ENST00000532449 HDAC1Q13547 482 aaPredicted RBP13.01□□□□□ -0.33
CHEK1-213ENST00000532449 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
CHEK1-213ENST00000532449 RAPGEF6Q8TEU7 1601 aa13.01□□□□□ -0.33
CHEK1-213ENST00000532449 TPD52L1Q16890 204 aaPredicted RBP13.01□□□□□ -0.33
CHEK1-213ENST00000532449 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
CHEK1-213ENST00000532449 TRMT1Q9NXH9 659 aaKnown RBP13.01□□□□□ -0.33
CHEK1-213ENST00000532449 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
CHEK1-213ENST00000532449 FOXO3O43524 673 aa13.01□□□□□ -0.33
CHEK1-213ENST00000532449 GADD45BO75293 160 aaPredicted RBP13.01□□□□□ -0.33
CHEK1-213ENST00000532449 MBD3O95983 291 aa13.01□□□□□ -0.33
CHEK1-213ENST00000532449 TMEM63CQ9P1W3 806 aa13.01□□□□□ -0.33
CHEK1-213ENST00000532449 GOLGA6L6A8MZA4 724 aa13□□□□□ -0.33
CHEK1-213ENST00000532449 SF3A1Q15459 793 aaKnown RBP13□□□□□ -0.33
CHEK1-213ENST00000532449 FAM184AQ8NB25 1140 aa13□□□□□ -0.33
CHEK1-213ENST00000532449 JAKMIP1Q96N16 626 aaKnown RBP13□□□□□ -0.33
CHEK1-213ENST00000532449 ASXL1Q8IXJ9 1541 aa13□□□□□ -0.33
CHEK1-213ENST00000532449 CFAP65Q6ZU64 1925 aaKnown RBP13□□□□□ -0.33
CHEK1-213ENST00000532449 IFIT2P09913 472 aaKnown RBP13□□□□□ -0.33
CHEK1-213ENST00000532449 CASTP20810 708 aaKnown RBP13□□□□□ -0.33
CHEK1-213ENST00000532449 AAMPQ13685 434 aa13□□□□□ -0.33
CHEK1-213ENST00000532449 FAM135AQ9P2D6 1515 aa13□□□□□ -0.33
CHEK1-213ENST00000532449 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
CHEK1-213ENST00000532449 GUCY1B3Q02153 619 aa12.99□□□□□ -0.33
CHEK1-213ENST00000532449 TTC22Q5TAA0 569 aa12.99□□□□□ -0.33
CHEK1-213ENST00000532449 PLEKHM2Q8IWE5 1019 aa12.99□□□□□ -0.33
CHEK1-213ENST00000532449 LRRCC1Q9C099 1032 aa12.99□□□□□ -0.33
CHEK1-213ENST00000532449 SCAF11Q99590 1463 aaKnown RBP12.99□□□□□ -0.33
CHEK1-213ENST00000532449 FSD2A1L4K1 749 aa12.99□□□□□ -0.33
CHEK1-213ENST00000532449 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
CHEK1-213ENST00000532449 CGNQ9P2M7 1197 aaKnown RBP12.99□□□□□ -0.33
CHEK1-213ENST00000532449 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
CHEK1-213ENST00000532449 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms