RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 LARP1Q6PKG0 1096 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-220ENST00000532375 COG3Q96JB2 828 aa19.3■□□□□ 0.68
TSPAN4-220ENST00000532375 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
TSPAN4-220ENST00000532375 SPATA31A1Q5TZJ5 1347 aa19.29■□□□□ 0.68
TSPAN4-220ENST00000532375 WASHC2AQ641Q2 1341 aa19.29■□□□□ 0.68
TSPAN4-220ENST00000532375 BRWD3Q6RI45 1802 aa19.28■□□□□ 0.68
TSPAN4-220ENST00000532375 ZBTB7CA1YPR0 619 aa19.28■□□□□ 0.68
TSPAN4-220ENST00000532375 ABCC6O95255 1503 aa19.28■□□□□ 0.68
TSPAN4-220ENST00000532375 CCDC7Q96M83 1385 aa19.28■□□□□ 0.68
TSPAN4-220ENST00000532375 EVA1CP58658 441 aa19.27■□□□□ 0.68
TSPAN4-220ENST00000532375 CCDC9Q9Y3X0 531 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-220ENST00000532375 SEPT12Q8IYM1 358 aa19.26■□□□□ 0.67
TSPAN4-220ENST00000532375 PER1O15534 1290 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-220ENST00000532375 FAM98CQ17RN3 349 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-220ENST00000532375 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
TSPAN4-220ENST00000532375 MAP3K19Q56UN5 1328 aa19.25■□□□□ 0.67
TSPAN4-220ENST00000532375 THSD7AQ9UPZ6 1657 aa19.24■□□□□ 0.67
TSPAN4-220ENST00000532375 IP6K1Q92551 441 aa19.24■□□□□ 0.67
TSPAN4-220ENST00000532375 WDR17Q8IZU2 1322 aa19.24■□□□□ 0.67
TSPAN4-220ENST00000532375 BARGINQ6ZT62 677 aa19.23■□□□□ 0.67
TSPAN4-220ENST00000532375 CRB1P82279 1406 aa19.23■□□□□ 0.67
TSPAN4-220ENST00000532375 RRS1Q15050 365 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-220ENST00000532375 ANKRD26Q9UPS8 1709 aa19.21■□□□□ 0.67
TSPAN4-220ENST00000532375 ERBB3P21860 1342 aa19.21■□□□□ 0.67
TSPAN4-220ENST00000532375 HOXC9P31274 260 aa19.2■□□□□ 0.66
TSPAN4-220ENST00000532375 AMER1Q5JTC6 1135 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-220ENST00000532375 TCP11L2Q8N4U5 519 aa19.2■□□□□ 0.66
TSPAN4-220ENST00000532375 UPF1Q92900 1129 aaKnown RBP eCLIP19.2■□□□□ 0.66
TSPAN4-220ENST00000532375 USP35Q9P2H5 1018 aa19.2■□□□□ 0.66
TSPAN4-220ENST00000532375 PEAK1Q9H792 1746 aa19.2■□□□□ 0.66
TSPAN4-220ENST00000532375 BLMP54132 1417 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-220ENST00000532375 CARD10Q9BWT7 1032 aa19.19■□□□□ 0.66
TSPAN4-220ENST00000532375 THRAP3Q9Y2W1 955 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-220ENST00000532375 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-220ENST00000532375 TOM1L2Q6ZVM7 507 aa19.18■□□□□ 0.66
TSPAN4-220ENST00000532375 ANKRD24Q8TF21 1146 aa19.17■□□□□ 0.66
TSPAN4-220ENST00000532375 EP400Q96L91 3159 aa19.17■□□□□ 0.66
TSPAN4-220ENST00000532375 KRT27Q7Z3Y8 459 aa19.16■□□□□ 0.66
TSPAN4-220ENST00000532375 KNSTRNQ9Y448 316 aa19.16■□□□□ 0.66
TSPAN4-220ENST00000532375 RTL1A6NKG5 1358 aa19.16■□□□□ 0.66
TSPAN4-220ENST00000532375 NSD2O96028 1365 aa19.16■□□□□ 0.66
TSPAN4-220ENST00000532375 AMPHP49418 695 aa19.15■□□□□ 0.66
TSPAN4-220ENST00000532375 POLKQ9UBT6 870 aa19.15■□□□□ 0.66
TSPAN4-220ENST00000532375 EMILIN1Q9Y6C2 1016 aa19.15■□□□□ 0.66
TSPAN4-220ENST00000532375 KIF24Q5T7B8 1368 aa19.15■□□□□ 0.66
TSPAN4-220ENST00000532375 DISP2A7MBM2 1401 aa19.15■□□□□ 0.66
TSPAN4-220ENST00000532375 PARP4Q9UKK3 1724 aaKnown RBP19.14■□□□□ 0.66
TSPAN4-220ENST00000532375 RGPD2P0DJD1 1756 aa19.14■□□□□ 0.66
TSPAN4-220ENST00000532375 WNK3Q9BYP7 1800 aa19.14■□□□□ 0.65
TSPAN4-220ENST00000532375 HSP90AB2PQ58FF8 381 aa19.14■□□□□ 0.65
TSPAN4-220ENST00000532375 CSB-PGBD3P0DP91 1061 aa19.13■□□□□ 0.65
TSPAN4-220ENST00000532375 INSRP06213 1382 aa19.12■□□□□ 0.65
TSPAN4-220ENST00000532375 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-220ENST00000532375 FLT4P35916 1363 aa19.11■□□□□ 0.65
TSPAN4-220ENST00000532375 FAM182BQ5T319 152 aa19.11■□□□□ 0.65
TSPAN4-220ENST00000532375 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-220ENST00000532375 NLRP2Q9NX02 1062 aa19.11■□□□□ 0.65
TSPAN4-220ENST00000532375 FAM208AQ9UK61 1670 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-220ENST00000532375 NPC1L1Q9UHC9 1359 aa19.1■□□□□ 0.65
TSPAN4-220ENST00000532375 A0A0G2JS52 829 aa19.1■□□□□ 0.65
TSPAN4-220ENST00000532375 TNNT2P45379 298 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-220ENST00000532375 MYT1Q01538 1121 aa19.1■□□□□ 0.65
TSPAN4-220ENST00000532375 NBPF6Q5VWK0 638 aa19.09■□□□□ 0.65
TSPAN4-220ENST00000532375 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
TSPAN4-220ENST00000532375 NBPF4Q96M43 638 aa19.09■□□□□ 0.65
TSPAN4-220ENST00000532375 LRRC37A3O60309 1634 aa19.09■□□□□ 0.65
TSPAN4-220ENST00000532375 CDCA7Q9BWT1 371 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-220ENST00000532375 SMG6Q86US8 1419 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-220ENST00000532375 DDB1Q16531 1140 aa19.05■□□□□ 0.64
TSPAN4-220ENST00000532375 PPM1GO15355 546 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-220ENST00000532375 IL2RBP14784 551 aa19.04■□□□□ 0.64
TSPAN4-220ENST00000532375 PDE3BQ13370 1112 aa19.04■□□□□ 0.64
TSPAN4-220ENST00000532375 NCAPD2Q15021 1401 aa19.04■□□□□ 0.64
TSPAN4-220ENST00000532375 CC2D1BQ5T0F9 858 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-220ENST00000532375 CCDC125Q86Z20 511 aa19.04■□□□□ 0.64
TSPAN4-220ENST00000532375 MARCH10Q8NA82 808 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-220ENST00000532375 FAM196AQ6ZSG2 479 aa19.02■□□□□ 0.64
TSPAN4-220ENST00000532375 EXOC5O00471 708 aa19.01■□□□□ 0.63
TSPAN4-220ENST00000532375 EIF4A2Q14240 407 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-220ENST00000532375 USHBP1Q8N6Y0 703 aa19.01■□□□□ 0.63
TSPAN4-220ENST00000532375 SBF2Q86WG5 1849 aa19.01■□□□□ 0.63
TSPAN4-220ENST00000532375 TNS2Q63HR2 1409 aa19■□□□□ 0.63
TSPAN4-220ENST00000532375 MEGF6O75095 1541 aa19■□□□□ 0.63
TSPAN4-220ENST00000532375 EYA1Q99502 592 aa19■□□□□ 0.63
TSPAN4-220ENST00000532375 BCL9O00512 1426 aa19■□□□□ 0.63
TSPAN4-220ENST00000532375 SHANK3Q9BYB0 1731 aa18.98■□□□□ 0.63
TSPAN4-220ENST00000532375 MTHFSP49914 203 aa18.98■□□□□ 0.63
TSPAN4-220ENST00000532375 TNS1Q9HBL0 1735 aaKnown RBP18.97■□□□□ 0.63
TSPAN4-220ENST00000532375 OVOS2A0A0G2JMS6 1433 aa18.97■□□□□ 0.63
TSPAN4-220ENST00000532375 TRIM37O94972 964 aa18.96■□□□□ 0.63
TSPAN4-220ENST00000532375 RGPD1P0DJD0 1748 aa18.96■□□□□ 0.63
TSPAN4-220ENST00000532375 IL13P35225 146 aa18.95■□□□□ 0.62
TSPAN4-220ENST00000532375 PTF1AQ7RTS3 328 aa18.95■□□□□ 0.62
TSPAN4-220ENST00000532375 DEFB132Q7Z7B7 95 aa18.95■□□□□ 0.62
TSPAN4-220ENST00000532375 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
TSPAN4-220ENST00000532375 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-220ENST00000532375 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
TSPAN4-220ENST00000532375 ZCRB1Q8TBF4 217 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-220ENST00000532375 RAPGEF4Q8WZA2 1011 aa18.92■□□□□ 0.62
TSPAN4-220ENST00000532375 COL3A1P02461 1466 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms