RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
SRPRA-207ENST00000532268 HSP90AB2PQ58FF8 381 aa12.73□□□□□ -0.37
SRPRA-207ENST00000532268 ARHGEF25Q86VW2 580 aa12.73□□□□□ -0.37
SRPRA-207ENST00000532268 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
SRPRA-207ENST00000532268 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
SRPRA-207ENST00000532268 RTL1A6NKG5 1358 aa12.72□□□□□ -0.37
SRPRA-207ENST00000532268 KIAA0232Q92628 1395 aa12.72□□□□□ -0.37
SRPRA-207ENST00000532268 ADAMTS2O95450 1211 aa12.72□□□□□ -0.37
SRPRA-207ENST00000532268 YTHDC1Q96MU7 727 aaKnown RBP12.72□□□□□ -0.37
SRPRA-207ENST00000532268 LRP6O75581 1613 aa12.71□□□□□ -0.37
SRPRA-207ENST00000532268 U2AF1L5P0DN76 240 aaPredicted RBP12.71□□□□□ -0.37
SRPRA-207ENST00000532268 U2AF1Q01081 240 aaKnown RBP eCLIP12.71□□□□□ -0.37
SRPRA-207ENST00000532268 IP6K1Q92551 441 aa12.71□□□□□ -0.37
SRPRA-207ENST00000532268 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
SRPRA-207ENST00000532268 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-207ENST00000532268 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
SRPRA-207ENST00000532268 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
SRPRA-207ENST00000532268 LTN1O94822 1766 aa12.7□□□□□ -0.38
SRPRA-207ENST00000532268 PEAK1Q9H792 1746 aa12.69□□□□□ -0.38
SRPRA-207ENST00000532268 EVA1CP58658 441 aa12.69□□□□□ -0.38
SRPRA-207ENST00000532268 EIF4A2Q14240 407 aaKnown RBP12.69□□□□□ -0.38
SRPRA-207ENST00000532268 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
SRPRA-207ENST00000532268 CPDO75976 1380 aa12.69□□□□□ -0.38
SRPRA-207ENST00000532268 INSRP06213 1382 aa12.69□□□□□ -0.38
SRPRA-207ENST00000532268 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
SRPRA-207ENST00000532268 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
SRPRA-207ENST00000532268 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
SRPRA-207ENST00000532268 ANKRD24Q8TF21 1146 aa12.68□□□□□ -0.38
SRPRA-207ENST00000532268 NGLY1Q96IV0 654 aa12.68□□□□□ -0.38
SRPRA-207ENST00000532268 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
SRPRA-207ENST00000532268 COL3A1P02461 1466 aaPredicted RBP12.67□□□□□ -0.38
SRPRA-207ENST00000532268 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
SRPRA-207ENST00000532268 NEFMP07197 916 aa12.67□□□□□ -0.38
SRPRA-207ENST00000532268 IL13P35225 146 aa12.67□□□□□ -0.38
SRPRA-207ENST00000532268 STRN4Q9NRL3 753 aa12.67□□□□□ -0.38
SRPRA-207ENST00000532268 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
SRPRA-207ENST00000532268 AFF2P51816 1311 aa12.66□□□□□ -0.38
SRPRA-207ENST00000532268 BLMP54132 1417 aaPredicted RBP12.66□□□□□ -0.38
SRPRA-207ENST00000532268 HMOX1P09601 288 aa12.66□□□□□ -0.38
SRPRA-207ENST00000532268 CCDC146Q8IYE0 955 aa12.66□□□□□ -0.38
SRPRA-207ENST00000532268 C8orf37Q96NL8 207 aa12.66□□□□□ -0.38
SRPRA-207ENST00000532268 NLRP2Q9NX02 1062 aa12.66□□□□□ -0.38
SRPRA-207ENST00000532268 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
SRPRA-207ENST00000532268 FNBP4Q8N3X1 1017 aaPredicted RBP12.65□□□□□ -0.38
SRPRA-207ENST00000532268 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
SRPRA-207ENST00000532268 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
SRPRA-207ENST00000532268 HNRNPUQ00839 825 aaKnown RBP eCLIP12.64□□□□□ -0.39
SRPRA-207ENST00000532268 SULT6B1Q6IMI4 303 aa12.64□□□□□ -0.39
SRPRA-207ENST00000532268 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
SRPRA-207ENST00000532268 USHBP1Q8N6Y0 703 aa12.64□□□□□ -0.39
SRPRA-207ENST00000532268 PNNQ9H307 717 aaKnown RBP12.64□□□□□ -0.39
SRPRA-207ENST00000532268 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
SRPRA-207ENST00000532268 ERBB3P21860 1342 aa12.63□□□□□ -0.39
SRPRA-207ENST00000532268 EYA1Q99502 592 aa12.63□□□□□ -0.39
SRPRA-207ENST00000532268 COL14A1Q05707 1796 aaKnown RBP12.62□□□□□ -0.39
SRPRA-207ENST00000532268 PRKAR2BP31323 418 aa12.62□□□□□ -0.39
SRPRA-207ENST00000532268 NBPF6Q5VWK0 638 aa12.62□□□□□ -0.39
SRPRA-207ENST00000532268 AEBP1Q8IUX7 1158 aa12.62□□□□□ -0.39
SRPRA-207ENST00000532268 RUNDC1Q96C34 613 aa12.62□□□□□ -0.39
SRPRA-207ENST00000532268 NBPF4Q96M43 638 aa12.62□□□□□ -0.39
SRPRA-207ENST00000532268 CCDC9Q9Y3X0 531 aaKnown RBP12.62□□□□□ -0.39
SRPRA-207ENST00000532268 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
SRPRA-207ENST00000532268 ABCC6O95255 1503 aa12.62□□□□□ -0.39
SRPRA-207ENST00000532268 FCHSD2O94868 740 aa12.61□□□□□ -0.39
SRPRA-207ENST00000532268 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
SRPRA-207ENST00000532268 USP21Q9UK80 565 aa12.61□□□□□ -0.39
SRPRA-207ENST00000532268 RGPD5Q99666 1765 aa12.61□□□□□ -0.39
SRPRA-207ENST00000532268 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
SRPRA-207ENST00000532268 IGSF1Q8N6C5 1336 aa12.61□□□□□ -0.39
SRPRA-207ENST00000532268 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
SRPRA-207ENST00000532268 RXRBP28702 533 aa12.6□□□□□ -0.39
SRPRA-207ENST00000532268 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
SRPRA-207ENST00000532268 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
SRPRA-207ENST00000532268 RSPH6AQ9H0K4 717 aa12.6□□□□□ -0.39
SRPRA-207ENST00000532268 COL18A1P39060 1754 aa12.6□□□□□ -0.39
SRPRA-207ENST00000532268 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-207ENST00000532268 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
SRPRA-207ENST00000532268 LMO7Q8WWI1 1683 aa12.58□□□□□ -0.4
SRPRA-207ENST00000532268 APAF1O14727 1248 aa12.58□□□□□ -0.4
SRPRA-207ENST00000532268 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
SRPRA-207ENST00000532268 UNC5CLQ8IV45 518 aa12.58□□□□□ -0.4
SRPRA-207ENST00000532268 TRPC5Q9UL62 973 aaPredicted RBP12.58□□□□□ -0.4
SRPRA-207ENST00000532268 RRP7AQ9Y3A4 280 aaKnown RBP12.58□□□□□ -0.4
SRPRA-207ENST00000532268 BCL9LQ86UU0 1499 aa12.58□□□□□ -0.4
SRPRA-207ENST00000532268 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
SRPRA-207ENST00000532268 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-207ENST00000532268 SLIT2O94813 1529 aa12.57□□□□□ -0.4
SRPRA-207ENST00000532268 CRB1P82279 1406 aa12.56□□□□□ -0.4
SRPRA-207ENST00000532268 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
SRPRA-207ENST00000532268 CARD10Q9BWT7 1032 aa12.56□□□□□ -0.4
SRPRA-207ENST00000532268 NWD2Q9ULI1 1742 aa12.56□□□□□ -0.4
SRPRA-207ENST00000532268 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
SRPRA-207ENST00000532268 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
SRPRA-207ENST00000532268 RGPD1P0DJD0 1748 aa12.55□□□□□ -0.4
SRPRA-207ENST00000532268 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.55□□□□□ -0.4
SRPRA-207ENST00000532268 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
SRPRA-207ENST00000532268 PLEKHF1Q96S99 279 aa12.55□□□□□ -0.4
SRPRA-207ENST00000532268 KDRP35968 1356 aa12.55□□□□□ -0.4
SRPRA-207ENST00000532268 A0A0G2JS52 829 aa12.54□□□□□ -0.4
SRPRA-207ENST00000532268 RIPK4P57078 832 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms