RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.56
FDFT1-219ENST00000531249 LTN1O94822 1766 aa18.52■□□□□ 0.55
FDFT1-219ENST00000531249 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
FDFT1-219ENST00000531249 POTEAQ6S8J7 498 aa18.51■□□□□ 0.55
FDFT1-219ENST00000531249 CCDC9Q9Y3X0 531 aaKnown RBP18.51■□□□□ 0.55
FDFT1-219ENST00000531249 HOXC9P31274 260 aa18.5■□□□□ 0.55
FDFT1-219ENST00000531249 IP6K1Q92551 441 aa18.5■□□□□ 0.55
FDFT1-219ENST00000531249 POLKQ9UBT6 870 aa18.5■□□□□ 0.55
FDFT1-219ENST00000531249 TRPC5Q9UL62 973 aaPredicted RBP18.5■□□□□ 0.55
FDFT1-219ENST00000531249 LMO7Q8WWI1 1683 aa18.5■□□□□ 0.55
FDFT1-219ENST00000531249 COL18A1P39060 1754 aa18.5■□□□□ 0.55
FDFT1-219ENST00000531249 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
FDFT1-219ENST00000531249 LTV1Q96GA3 475 aaPredicted RBP18.49■□□□□ 0.55
FDFT1-219ENST00000531249 COL5A2P05997 1499 aaPredicted RBP18.48■□□□□ 0.55
FDFT1-219ENST00000531249 CSB-PGBD3P0DP91 1061 aa18.48■□□□□ 0.55
FDFT1-219ENST00000531249 LARP1Q6PKG0 1096 aaKnown RBP18.48■□□□□ 0.55
FDFT1-219ENST00000531249 NRAPQ86VF7 1730 aa18.48■□□□□ 0.55
FDFT1-219ENST00000531249 VPS72Q15906 364 aa18.47■□□□□ 0.55
FDFT1-219ENST00000531249 HSP90AB2PQ58FF8 381 aa18.47■□□□□ 0.55
FDFT1-219ENST00000531249 RGPD5Q99666 1765 aa18.47■□□□□ 0.55
FDFT1-219ENST00000531249 ATRNO75882 1429 aa18.47■□□□□ 0.55
FDFT1-219ENST00000531249 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
FDFT1-219ENST00000531249 FLT4P35916 1363 aa18.46■□□□□ 0.55
FDFT1-219ENST00000531249 ANKRD24Q8TF21 1146 aa18.46■□□□□ 0.55
FDFT1-219ENST00000531249 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
FDFT1-219ENST00000531249 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
FDFT1-219ENST00000531249 PEAK1Q9H792 1746 aa18.46■□□□□ 0.55
FDFT1-219ENST00000531249 ABCC6O95255 1503 aa18.45■□□□□ 0.54
FDFT1-219ENST00000531249 TOM1L2Q6ZVM7 507 aa18.45■□□□□ 0.54
FDFT1-219ENST00000531249 GJD4Q96KN9 370 aaPredicted RBP18.45■□□□□ 0.54
FDFT1-219ENST00000531249 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.45■□□□□ 0.54
FDFT1-219ENST00000531249 BLMP54132 1417 aaPredicted RBP18.44■□□□□ 0.54
FDFT1-219ENST00000531249 RXRBP28702 533 aa18.44■□□□□ 0.54
FDFT1-219ENST00000531249 ERBB3P21860 1342 aa18.44■□□□□ 0.54
FDFT1-219ENST00000531249 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
FDFT1-219ENST00000531249 MTHFSP49914 203 aa18.43■□□□□ 0.54
FDFT1-219ENST00000531249 RBM6P78332 1123 aaKnown RBP18.43■□□□□ 0.54
FDFT1-219ENST00000531249 SPATA31A5Q5VU36 1347 aa18.43■□□□□ 0.54
FDFT1-219ENST00000531249 SPATA31A7Q8IWB4 1347 aa18.43■□□□□ 0.54
FDFT1-219ENST00000531249 KIF24Q5T7B8 1368 aa18.42■□□□□ 0.54
FDFT1-219ENST00000531249 NLRP2Q9NX02 1062 aa18.42■□□□□ 0.54
FDFT1-219ENST00000531249 INSRP06213 1382 aa18.42■□□□□ 0.54
FDFT1-219ENST00000531249 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
FDFT1-219ENST00000531249 SPATA31A1Q5TZJ5 1347 aa18.41■□□□□ 0.54
FDFT1-219ENST00000531249 PARD3Q8TEW0 1356 aa18.41■□□□□ 0.54
FDFT1-219ENST00000531249 CRB1P82279 1406 aa18.4■□□□□ 0.54
FDFT1-219ENST00000531249 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
FDFT1-219ENST00000531249 GLI3P10071 1580 aa18.39■□□□□ 0.53
FDFT1-219ENST00000531249 RALBP1Q15311 655 aa18.39■□□□□ 0.53
FDFT1-219ENST00000531249 FAM98CQ17RN3 349 aaKnown RBP18.39■□□□□ 0.53
FDFT1-219ENST00000531249 A0A0G2JS52 829 aa18.38■□□□□ 0.53
FDFT1-219ENST00000531249 MYT1Q01538 1121 aa18.38■□□□□ 0.53
FDFT1-219ENST00000531249 TCP11L2Q8N4U5 519 aa18.38■□□□□ 0.53
FDFT1-219ENST00000531249 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
FDFT1-219ENST00000531249 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
FDFT1-219ENST00000531249 EIF4A2Q14240 407 aaKnown RBP18.37■□□□□ 0.53
FDFT1-219ENST00000531249 USHBP1Q8N6Y0 703 aa18.37■□□□□ 0.53
FDFT1-219ENST00000531249 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
FDFT1-219ENST00000531249 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
FDFT1-219ENST00000531249 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
FDFT1-219ENST00000531249 RGPD2P0DJD1 1756 aa18.33■□□□□ 0.53
FDFT1-219ENST00000531249 ANP32CO43423 234 aa18.33■□□□□ 0.52
FDFT1-219ENST00000531249 BARGINQ6ZT62 677 aa18.33■□□□□ 0.52
FDFT1-219ENST00000531249 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.52
FDFT1-219ENST00000531249 CFAP53Q96M91 514 aa18.33■□□□□ 0.52
FDFT1-219ENST00000531249 EYA1Q99502 592 aa18.33■□□□□ 0.52
FDFT1-219ENST00000531249 THRAP3Q9Y2W1 955 aaKnown RBP18.33■□□□□ 0.52
FDFT1-219ENST00000531249 RGS12O14924 1447 aa18.32■□□□□ 0.52
FDFT1-219ENST00000531249 MYBBP1AQ9BQG0 1328 aaKnown RBP18.32■□□□□ 0.52
FDFT1-219ENST00000531249 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
FDFT1-219ENST00000531249 IL13P35225 146 aa18.32■□□□□ 0.52
FDFT1-219ENST00000531249 ILDR2Q71H61 639 aa18.32■□□□□ 0.52
FDFT1-219ENST00000531249 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
FDFT1-219ENST00000531249 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
FDFT1-219ENST00000531249 COL3A1P02461 1466 aaPredicted RBP18.29■□□□□ 0.52
FDFT1-219ENST00000531249 IL2RBP14784 551 aa18.29■□□□□ 0.52
FDFT1-219ENST00000531249 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
FDFT1-219ENST00000531249 IGSF1Q8N6C5 1336 aa18.27■□□□□ 0.52
FDFT1-219ENST00000531249 RAPGEF4Q8WZA2 1011 aa18.27■□□□□ 0.52
FDFT1-219ENST00000531249 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
FDFT1-219ENST00000531249 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
FDFT1-219ENST00000531249 THSD7AQ9UPZ6 1657 aa18.26■□□□□ 0.51
FDFT1-219ENST00000531249 DDB1Q16531 1140 aa18.26■□□□□ 0.51
FDFT1-219ENST00000531249 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
FDFT1-219ENST00000531249 SULT6B1Q6IMI4 303 aa18.26■□□□□ 0.51
FDFT1-219ENST00000531249 AEBP1Q8IUX7 1158 aa18.26■□□□□ 0.51
FDFT1-219ENST00000531249 MEGF6O75095 1541 aa18.25■□□□□ 0.51
FDFT1-219ENST00000531249 HMOX1P09601 288 aa18.25■□□□□ 0.51
FDFT1-219ENST00000531249 TATP17735 454 aaPredicted RBP18.25■□□□□ 0.51
FDFT1-219ENST00000531249 WNK3Q9BYP7 1800 aa18.24■□□□□ 0.51
FDFT1-219ENST00000531249 EXOC5O00471 708 aa18.24■□□□□ 0.51
FDFT1-219ENST00000531249 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
FDFT1-219ENST00000531249 KRT27Q7Z3Y8 459 aa18.24■□□□□ 0.51
FDFT1-219ENST00000531249 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
FDFT1-219ENST00000531249 FAM182BQ5T319 152 aa18.23■□□□□ 0.51
FDFT1-219ENST00000531249 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
FDFT1-219ENST00000531249 BRWD3Q6RI45 1802 aa18.22■□□□□ 0.51
FDFT1-219ENST00000531249 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
FDFT1-219ENST00000531249 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
FDFT1-219ENST00000531249 RGPD1P0DJD0 1748 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms