RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 KIF24Q5T7B8 1368 aa21.87■■□□□ 1.09
BRK1-201ENST00000530758 FBLN1P23142 703 aa21.86■■□□□ 1.09
BRK1-201ENST00000530758 GLI3P10071 1580 aa21.86■■□□□ 1.09
BRK1-201ENST00000530758 MAP3K19Q56UN5 1328 aa21.85■■□□□ 1.09
BRK1-201ENST00000530758 RGPD5Q99666 1765 aa21.85■■□□□ 1.09
BRK1-201ENST00000530758 SOX12O15370 315 aa21.85■■□□□ 1.09
BRK1-201ENST00000530758 CC2D1BQ5T0F9 858 aaKnown RBP21.85■■□□□ 1.09
BRK1-201ENST00000530758 CAMTA1Q9Y6Y1 1673 aa21.85■■□□□ 1.09
BRK1-201ENST00000530758 NRAPQ86VF7 1730 aa21.84■■□□□ 1.09
BRK1-201ENST00000530758 CHRNA2Q15822 529 aa21.84■■□□□ 1.09
BRK1-201ENST00000530758 IP6K1Q92551 441 aa21.84■■□□□ 1.09
BRK1-201ENST00000530758 UPF1Q92900 1129 aaKnown RBP eCLIP21.83■■□□□ 1.09
BRK1-201ENST00000530758 BTG4Q9NY30 223 aa21.83■■□□□ 1.09
BRK1-201ENST00000530758 POLKQ9UBT6 870 aa21.83■■□□□ 1.09
BRK1-201ENST00000530758 AXIN2Q9Y2T1 843 aa21.83■■□□□ 1.09
BRK1-201ENST00000530758 UNC5CLQ8IV45 518 aa21.82■■□□□ 1.08
BRK1-201ENST00000530758 RTL1A6NKG5 1358 aa21.82■■□□□ 1.08
BRK1-201ENST00000530758 SMG6Q86US8 1419 aaKnown RBP21.81■■□□□ 1.08
BRK1-201ENST00000530758 PEAK1Q9H792 1746 aa21.81■■□□□ 1.08
BRK1-201ENST00000530758 RRS1Q15050 365 aaKnown RBP21.81■■□□□ 1.08
BRK1-201ENST00000530758 BLMP54132 1417 aaPredicted RBP21.8■■□□□ 1.08
BRK1-201ENST00000530758 PARD3Q8TEW0 1356 aa21.8■■□□□ 1.08
BRK1-201ENST00000530758 GJD4Q96KN9 370 aaPredicted RBP21.8■■□□□ 1.08
BRK1-201ENST00000530758 HOXC9P31274 260 aa21.79■■□□□ 1.08
BRK1-201ENST00000530758 COL5A2P05997 1499 aaPredicted RBP21.78■■□□□ 1.08
BRK1-201ENST00000530758 FLT4P35916 1363 aa21.78■■□□□ 1.08
BRK1-201ENST00000530758 AMPHP49418 695 aa21.78■■□□□ 1.08
BRK1-201ENST00000530758 EMILIN1Q9Y6C2 1016 aa21.78■■□□□ 1.08
BRK1-201ENST00000530758 TNNT2P45379 298 aaPredicted RBP21.77■■□□□ 1.08
BRK1-201ENST00000530758 RALBP1Q15311 655 aa21.77■■□□□ 1.08
BRK1-201ENST00000530758 VPS72Q15906 364 aa21.77■■□□□ 1.08
BRK1-201ENST00000530758 INSRP06213 1382 aa21.76■■□□□ 1.07
BRK1-201ENST00000530758 ZBTB7CA1YPR0 619 aa21.75■■□□□ 1.07
BRK1-201ENST00000530758 BRWD3Q6RI45 1802 aa21.75■■□□□ 1.07
BRK1-201ENST00000530758 HSP90AB2PQ58FF8 381 aa21.74■■□□□ 1.07
BRK1-201ENST00000530758 ERBB3P21860 1342 aa21.74■■□□□ 1.07
BRK1-201ENST00000530758 WDR17Q8IZU2 1322 aa21.74■■□□□ 1.07
BRK1-201ENST00000530758 MTHFSP49914 203 aa21.73■■□□□ 1.07
BRK1-201ENST00000530758 EVA1CP58658 441 aa21.73■■□□□ 1.07
BRK1-201ENST00000530758 FAM208AQ9UK61 1670 aaKnown RBP21.72■■□□□ 1.07
BRK1-201ENST00000530758 PPP2R1AP30153 589 aa21.72■■□□□ 1.07
BRK1-201ENST00000530758 PRKRIP1Q9H875 184 aaPredicted RBP21.72■■□□□ 1.07
BRK1-201ENST00000530758 EP400Q96L91 3159 aa21.72■■□□□ 1.07
BRK1-201ENST00000530758 ANKRD24Q8TF21 1146 aa21.71■■□□□ 1.07
BRK1-201ENST00000530758 SPATA31A5Q5VU36 1347 aa21.71■■□□□ 1.07
BRK1-201ENST00000530758 SPATA31A7Q8IWB4 1347 aa21.71■■□□□ 1.07
BRK1-201ENST00000530758 CRB1P82279 1406 aa21.71■■□□□ 1.07
BRK1-201ENST00000530758 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
BRK1-201ENST00000530758 LARP1Q6PKG0 1096 aaKnown RBP21.7■■□□□ 1.06
BRK1-201ENST00000530758 STRN4Q9NRL3 753 aa21.7■■□□□ 1.06
BRK1-201ENST00000530758 PPM1GO15355 546 aaPredicted RBP21.69■■□□□ 1.06
BRK1-201ENST00000530758 SPATA31A1Q5TZJ5 1347 aa21.69■■□□□ 1.06
BRK1-201ENST00000530758 ONECUT3O60422 494 aaPredicted RBP21.68■■□□□ 1.06
BRK1-201ENST00000530758 CARD10Q9BWT7 1032 aa21.68■■□□□ 1.06
BRK1-201ENST00000530758 RGPD2P0DJD1 1756 aa21.67■■□□□ 1.06
BRK1-201ENST00000530758 THRAP3Q9Y2W1 955 aaKnown RBP21.67■■□□□ 1.06
BRK1-201ENST00000530758 MYBBP1AQ9BQG0 1328 aaKnown RBP21.65■■□□□ 1.06
BRK1-201ENST00000530758 BARGINQ6ZT62 677 aa21.65■■□□□ 1.06
BRK1-201ENST00000530758 TOM1L2Q6ZVM7 507 aa21.65■■□□□ 1.06
BRK1-201ENST00000530758 CSB-PGBD3P0DP91 1061 aa21.64■■□□□ 1.05
BRK1-201ENST00000530758 EIF4A2Q14240 407 aaKnown RBP21.64■■□□□ 1.05
BRK1-201ENST00000530758 SEPT12Q8IYM1 358 aa21.64■■□□□ 1.05
BRK1-201ENST00000530758 COL3A1P02461 1466 aaPredicted RBP21.64■■□□□ 1.05
BRK1-201ENST00000530758 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
BRK1-201ENST00000530758 IL13P35225 146 aa21.63■■□□□ 1.05
BRK1-201ENST00000530758 TCP11L2Q8N4U5 519 aa21.63■■□□□ 1.05
BRK1-201ENST00000530758 LTV1Q96GA3 475 aaPredicted RBP21.63■■□□□ 1.05
BRK1-201ENST00000530758 THSD7AQ9UPZ6 1657 aa21.63■■□□□ 1.05
BRK1-201ENST00000530758 NBPF6Q5VWK0 638 aa21.62■■□□□ 1.05
BRK1-201ENST00000530758 NBPF4Q96M43 638 aa21.62■■□□□ 1.05
BRK1-201ENST00000530758 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
BRK1-201ENST00000530758 RGPD1P0DJD0 1748 aa21.61■■□□□ 1.05
BRK1-201ENST00000530758 ANP32CO43423 234 aa21.61■■□□□ 1.05
BRK1-201ENST00000530758 NLRP2Q9NX02 1062 aa21.61■■□□□ 1.05
BRK1-201ENST00000530758 WNK3Q9BYP7 1800 aa21.6■■□□□ 1.05
BRK1-201ENST00000530758 DIAPH1O60610 1272 aaKnown RBP21.6■■□□□ 1.05
BRK1-201ENST00000530758 CFAP53Q96M91 514 aa21.6■■□□□ 1.05
BRK1-201ENST00000530758 EYA1Q99502 592 aa21.6■■□□□ 1.05
BRK1-201ENST00000530758 FAM98CQ17RN3 349 aaKnown RBP21.59■■□□□ 1.05
BRK1-201ENST00000530758 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.05
BRK1-201ENST00000530758 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.05
BRK1-201ENST00000530758 DISP2A7MBM2 1401 aa21.57■■□□□ 1.04
BRK1-201ENST00000530758 USP35Q9P2H5 1018 aa21.57■■□□□ 1.04
BRK1-201ENST00000530758 PARP4Q9UKK3 1724 aaKnown RBP21.56■■□□□ 1.04
BRK1-201ENST00000530758 KDRP35968 1356 aa21.54■■□□□ 1.04
BRK1-201ENST00000530758 PLEKHG2Q9H7P9 1386 aa21.54■■□□□ 1.04
BRK1-201ENST00000530758 IL2RBP14784 551 aa21.53■■□□□ 1.04
BRK1-201ENST00000530758 DIEXFQ68CQ4 756 aaKnown RBP21.53■■□□□ 1.04
BRK1-201ENST00000530758 KRT27Q7Z3Y8 459 aa21.53■■□□□ 1.04
BRK1-201ENST00000530758 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
BRK1-201ENST00000530758 USHBP1Q8N6Y0 703 aa21.5■■□□□ 1.03
BRK1-201ENST00000530758 SULT6B1Q6IMI4 303 aa21.48■■□□□ 1.03
BRK1-201ENST00000530758 CCDC125Q86Z20 511 aa21.48■■□□□ 1.03
BRK1-201ENST00000530758 RAPGEF4Q8WZA2 1011 aa21.48■■□□□ 1.03
BRK1-201ENST00000530758 MEGF6O75095 1541 aa21.48■■□□□ 1.03
BRK1-201ENST00000530758 LRRC37A3O60309 1634 aa21.47■■□□□ 1.03
BRK1-201ENST00000530758 OVOS2A0A0G2JMS6 1433 aa21.47■■□□□ 1.03
BRK1-201ENST00000530758 A0A0G2JS52 829 aa21.47■■□□□ 1.03
BRK1-201ENST00000530758 MYT1Q01538 1121 aa21.47■■□□□ 1.03
BRK1-201ENST00000530758 FAM182BQ5T319 152 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms