RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 THSD7AQ9UPZ6 1657 aa23.71■■□□□ 1.39
CCS-205ENST00000530384 KRT27Q7Z3Y8 459 aa23.7■■□□□ 1.38
CCS-205ENST00000530384 COG3Q96JB2 828 aa23.7■■□□□ 1.38
CCS-205ENST00000530384 CRB1P82279 1406 aa23.69■■□□□ 1.38
CCS-205ENST00000530384 BARGINQ6ZT62 677 aa23.69■■□□□ 1.38
CCS-205ENST00000530384 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
CCS-205ENST00000530384 LTN1O94822 1766 aa23.69■■□□□ 1.38
CCS-205ENST00000530384 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
CCS-205ENST00000530384 TCP11L2Q8N4U5 519 aa23.68■■□□□ 1.38
CCS-205ENST00000530384 AXIN2Q9Y2T1 843 aa23.68■■□□□ 1.38
CCS-205ENST00000530384 THRAP3Q9Y2W1 955 aaKnown RBP23.68■■□□□ 1.38
CCS-205ENST00000530384 WDR17Q8IZU2 1322 aa23.66■■□□□ 1.38
CCS-205ENST00000530384 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
CCS-205ENST00000530384 KIF20BQ96Q89 1820 aa23.66■■□□□ 1.38
CCS-205ENST00000530384 TOM1L2Q6ZVM7 507 aa23.65■■□□□ 1.38
CCS-205ENST00000530384 CCDC125Q86Z20 511 aa23.65■■□□□ 1.38
CCS-205ENST00000530384 FYB1O15117 783 aa23.64■■□□□ 1.37
CCS-205ENST00000530384 NSD3Q9BZ95 1437 aa23.62■■□□□ 1.37
CCS-205ENST00000530384 CSB-PGBD3P0DP91 1061 aa23.62■■□□□ 1.37
CCS-205ENST00000530384 CARD14Q9BXL6 1004 aa23.62■■□□□ 1.37
CCS-205ENST00000530384 GGNBP2Q9H3C7 697 aa23.62■■□□□ 1.37
CCS-205ENST00000530384 BLMP54132 1417 aaPredicted RBP23.59■■□□□ 1.37
CCS-205ENST00000530384 CARD10Q9BWT7 1032 aa23.59■■□□□ 1.37
CCS-205ENST00000530384 PARP4Q9UKK3 1724 aaKnown RBP23.59■■□□□ 1.37
CCS-205ENST00000530384 ERBB3P21860 1342 aa23.58■■□□□ 1.36
CCS-205ENST00000530384 CGNL1Q0VF96 1302 aa23.58■■□□□ 1.36
CCS-205ENST00000530384 IP6K1Q92551 441 aa23.57■■□□□ 1.36
CCS-205ENST00000530384 WNK3Q9BYP7 1800 aa23.56■■□□□ 1.36
CCS-205ENST00000530384 CCDC7Q96M83 1385 aa23.56■■□□□ 1.36
CCS-205ENST00000530384 PDE3BQ13370 1112 aa23.56■■□□□ 1.36
CCS-205ENST00000530384 CDCA7Q9BWT1 371 aaPredicted RBP23.56■■□□□ 1.36
CCS-205ENST00000530384 MAP3K19Q56UN5 1328 aa23.56■■□□□ 1.36
CCS-205ENST00000530384 C11orf95C9JLR9 678 aaPredicted RBP23.55■■□□□ 1.36
CCS-205ENST00000530384 SF3B2Q13435 895 aaKnown RBP23.55■■□□□ 1.36
CCS-205ENST00000530384 AMPHP49418 695 aa23.54■■□□□ 1.36
CCS-205ENST00000530384 ANKRD24Q8TF21 1146 aa23.54■■□□□ 1.36
CCS-205ENST00000530384 RTL1A6NKG5 1358 aa23.53■■□□□ 1.36
CCS-205ENST00000530384 EP400Q96L91 3159 aa23.52■■□□□ 1.36
CCS-205ENST00000530384 FAM208AQ9UK61 1670 aaKnown RBP23.52■■□□□ 1.36
CCS-205ENST00000530384 FBLN1P23142 703 aa23.52■■□□□ 1.36
CCS-205ENST00000530384 HOXC9P31274 260 aa23.52■■□□□ 1.36
CCS-205ENST00000530384 FAM182BQ5T319 152 aa23.52■■□□□ 1.36
CCS-205ENST00000530384 FAM196AQ6ZSG2 479 aa23.52■■□□□ 1.36
CCS-205ENST00000530384 PANK3Q9H999 370 aa23.52■■□□□ 1.36
CCS-205ENST00000530384 NLRP2Q9NX02 1062 aa23.52■■□□□ 1.36
CCS-205ENST00000530384 LRRC37A3O60309 1634 aa23.51■■□□□ 1.35
CCS-205ENST00000530384 RRS1Q15050 365 aaKnown RBP23.5■■□□□ 1.35
CCS-205ENST00000530384 DDB1Q16531 1140 aa23.5■■□□□ 1.35
CCS-205ENST00000530384 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
CCS-205ENST00000530384 RGPD1P0DJD0 1748 aa23.5■■□□□ 1.35
CCS-205ENST00000530384 DISP2A7MBM2 1401 aa23.5■■□□□ 1.35
CCS-205ENST00000530384 ANKRD26Q9UPS8 1709 aa23.49■■□□□ 1.35
CCS-205ENST00000530384 KIF24Q5T7B8 1368 aa23.49■■□□□ 1.35
CCS-205ENST00000530384 LTV1Q96GA3 475 aaPredicted RBP23.47■■□□□ 1.35
CCS-205ENST00000530384 NSD2O96028 1365 aa23.45■■□□□ 1.34
CCS-205ENST00000530384 FLT4P35916 1363 aa23.45■■□□□ 1.34
CCS-205ENST00000530384 BAG6P46379 1132 aa23.45■■□□□ 1.34
CCS-205ENST00000530384 OVOS2A0A0G2JMS6 1433 aa23.44■■□□□ 1.34
CCS-205ENST00000530384 SMG6Q86US8 1419 aaKnown RBP23.44■■□□□ 1.34
CCS-205ENST00000530384 EXOC5O00471 708 aa23.44■■□□□ 1.34
CCS-205ENST00000530384 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
CCS-205ENST00000530384 PEAK1Q9H792 1746 aa23.43■■□□□ 1.34
CCS-205ENST00000530384 IL2RBP14784 551 aa23.43■■□□□ 1.34
CCS-205ENST00000530384 KNSTRNQ9Y448 316 aa23.43■■□□□ 1.34
CCS-205ENST00000530384 TNS1Q9HBL0 1735 aaKnown RBP23.42■■□□□ 1.34
CCS-205ENST00000530384 INSRP06213 1382 aa23.42■■□□□ 1.34
CCS-205ENST00000530384 DEFB132Q7Z7B7 95 aa23.42■■□□□ 1.34
CCS-205ENST00000530384 TNS2Q63HR2 1409 aa23.42■■□□□ 1.34
CCS-205ENST00000530384 TRIM37O94972 964 aa23.41■■□□□ 1.34
CCS-205ENST00000530384 RGPD2P0DJD1 1756 aa23.4■■□□□ 1.34
CCS-205ENST00000530384 EMILIN1Q9Y6C2 1016 aa23.4■■□□□ 1.34
CCS-205ENST00000530384 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
CCS-205ENST00000530384 MARCH10Q8NA82 808 aaPredicted RBP23.38■■□□□ 1.33
CCS-205ENST00000530384 BCL9O00512 1426 aa23.38■■□□□ 1.33
CCS-205ENST00000530384 SBF2Q86WG5 1849 aa23.37■■□□□ 1.33
CCS-205ENST00000530384 WASHC2AQ641Q2 1341 aa23.36■■□□□ 1.33
CCS-205ENST00000530384 PPM1GO15355 546 aaPredicted RBP23.36■■□□□ 1.33
CCS-205ENST00000530384 POLKQ9UBT6 870 aa23.36■■□□□ 1.33
CCS-205ENST00000530384 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
CCS-205ENST00000530384 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
CCS-205ENST00000530384 MORC1Q86VD1 984 aa23.35■■□□□ 1.33
CCS-205ENST00000530384 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
CCS-205ENST00000530384 APBA3O96018 575 aa23.34■■□□□ 1.33
CCS-205ENST00000530384 EN1Q05925 392 aaPredicted RBP23.34■■□□□ 1.33
CCS-205ENST00000530384 AMER1Q5JTC6 1135 aaPredicted RBP23.32■■□□□ 1.32
CCS-205ENST00000530384 PARD3Q8TEW0 1356 aa23.31■■□□□ 1.32
CCS-205ENST00000530384 PER1O15534 1290 aaPredicted RBP23.31■■□□□ 1.32
CCS-205ENST00000530384 BCL11BQ9C0K0 894 aaPredicted RBP23.3■■□□□ 1.32
CCS-205ENST00000530384 USHBP1Q8N6Y0 703 aa23.29■■□□□ 1.32
CCS-205ENST00000530384 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
CCS-205ENST00000530384 CAMKK2Q96RR4 588 aa23.29■■□□□ 1.32
CCS-205ENST00000530384 MEGF6O75095 1541 aa23.28■■□□□ 1.32
CCS-205ENST00000530384 EZH2Q15910 746 aaKnown RBP23.28■■□□□ 1.32
CCS-205ENST00000530384 ZCRB1Q8TBF4 217 aaKnown RBP23.27■■□□□ 1.32
CCS-205ENST00000530384 TATP17735 454 aaPredicted RBP23.26■■□□□ 1.31
CCS-205ENST00000530384 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
CCS-205ENST00000530384 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
CCS-205ENST00000530384 RGPD3A6NKT7 1758 aaPredicted RBP23.25■■□□□ 1.31
CCS-205ENST00000530384 RGPD4Q7Z3J3 1758 aa23.25■■□□□ 1.31
CCS-205ENST00000530384 DDX54Q8TDD1 881 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms