RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 NINLQ9Y2I6 1382 aa9.07□□□□□ -0.96
CTNND1-223ENST00000529986 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
CTNND1-223ENST00000529986 TTC5Q8N0Z6 440 aa9.07□□□□□ -0.96
CTNND1-223ENST00000529986 WDR33Q9C0J8 1336 aaKnown RBP9.07□□□□□ -0.96
CTNND1-223ENST00000529986 PDCP20941 246 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 TAF3Q5VWG9 929 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 MAP3K1Q13233 1512 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 ERLIN1O75477 346 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 MTHFSP49914 203 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 TAX1BP1Q86VP1 789 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 GPATCH11Q8N954 259 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 GOLGA6L10A6NI86 522 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 PPFIBP1Q86W92 1011 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 UBXN4Q92575 508 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 SNAPC4Q5SXM2 1469 aa9.06□□□□□ -0.96
CTNND1-223ENST00000529986 ZFP91Q96JP5 570 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-223ENST00000529986 PLEKHH2Q8IVE3 1493 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 PPP2R1AP30153 589 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 PDE3AQ14432 1141 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 LARP1BQ659C4 914 aaKnown RBP9.05□□□□□ -0.96
CTNND1-223ENST00000529986 VPS37DQ86XT2 251 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 AMOTL1Q8IY63 956 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 ZNF396Q96N95 335 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-223ENST00000529986 DDX58O95786 925 aaKnown RBP9.05□□□□□ -0.96
CTNND1-223ENST00000529986 CCDC181Q5TID7 509 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 IPO4Q8TEX9 1081 aaKnown RBP9.05□□□□□ -0.96
CTNND1-223ENST00000529986 NEFHP12036 1026 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 KRT85P78386 507 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 LRRFIP2Q9Y608 721 aaKnown RBP9.05□□□□□ -0.96
CTNND1-223ENST00000529986 IQGAP2Q13576 1575 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 TMCO3Q6UWJ1 677 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 CLASRPQ8N2M8 674 aaKnown RBP9.05□□□□□ -0.96
CTNND1-223ENST00000529986 NUP62CLQ9H1M0 184 aa9.05□□□□□ -0.96
CTNND1-223ENST00000529986 MAGEC2Q9UBF1 373 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-223ENST00000529986 TROQ12816 1431 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-223ENST00000529986 GTF2F1P35269 517 aaKnown RBP eCLIP9.04□□□□□ -0.965e-6■■■□□ 17.8
CTNND1-223ENST00000529986 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 LRRCC1Q9C099 1032 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 GCC1Q96CN9 775 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 NOL10Q9BSC4 688 aaKnown RBP9.04□□□□□ -0.96
CTNND1-223ENST00000529986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.04□□□□□ -0.961e-6■■■■■ 38.5
CTNND1-223ENST00000529986 PRG4Q92954 1404 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-223ENST00000529986 SPATA32Q96LK8 384 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 CYP46A1Q9Y6A2 500 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 USP8P40818 1118 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 GIMAP7Q8NHV1 300 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 CCDC43Q96MW1 224 aaKnown RBP9.04□□□□□ -0.96
CTNND1-223ENST00000529986 BRMS1Q9HCU9 246 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 MYO6Q9UM54 1294 aa9.04□□□□□ -0.96
CTNND1-223ENST00000529986 ENOX2Q16206 610 aaKnown RBP9.04□□□□□ -0.96
CTNND1-223ENST00000529986 ANKRD62A6NC57 917 aa9.03□□□□□ -0.96
CTNND1-223ENST00000529986 CHD1LQ86WJ1 897 aa9.03□□□□□ -0.96
CTNND1-223ENST00000529986 TMX1Q9H3N1 280 aa9.03□□□□□ -0.96
CTNND1-223ENST00000529986 DAPK1P53355 1430 aa9.03□□□□□ -0.96
CTNND1-223ENST00000529986 C9orf84Q5VXU9 1444 aa9.03□□□□□ -0.96
CTNND1-223ENST00000529986 KIAA1107Q9UPP5 1409 aa9.03□□□□□ -0.96
CTNND1-223ENST00000529986 PNISRQ8TF01 805 aaKnown RBP9.03□□□□□ -0.96
CTNND1-223ENST00000529986 ZNHIT6Q9NWK9 470 aaKnown RBP9.03□□□□□ -0.96
CTNND1-223ENST00000529986 CIZ1Q9ULV3 898 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-223ENST00000529986 PTPN14Q15678 1187 aa9.03□□□□□ -0.96
CTNND1-223ENST00000529986 CABP2Q9NPB3 220 aa9.03□□□□□ -0.96
CTNND1-223ENST00000529986 SMG6Q86US8 1419 aaKnown RBP9.02□□□□□ -0.96
CTNND1-223ENST00000529986 SSFA2P28290 1259 aa9.02□□□□□ -0.96
CTNND1-223ENST00000529986 FERMT3Q86UX7 667 aa9.02□□□□□ -0.96
CTNND1-223ENST00000529986 C16orf45Q96MC5 204 aaPredicted RBP9.02□□□□□ -0.96
CTNND1-223ENST00000529986 UPF3BQ9BZI7 483 aaKnown RBP9.02□□□□□ -0.96
CTNND1-223ENST00000529986 TRMT1Q9NXH9 659 aaKnown RBP9.02□□□□□ -0.96
CTNND1-223ENST00000529986 USP25Q9UHP3 1055 aa9.02□□□□□ -0.96
CTNND1-223ENST00000529986 GOLGA6L7A0A1B0GV03 622 aa9.02□□□□□ -0.97
CTNND1-223ENST00000529986 XBP1P17861 261 aa9.02□□□□□ -0.97
CTNND1-223ENST00000529986 TICAM2Q86XR7 235 aa9.02□□□□□ -0.97
CTNND1-223ENST00000529986 TWISTNBQ3B726 338 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-223ENST00000529986 EPRSP07814 1512 aaKnown RBP9.02□□□□□ -0.97
CTNND1-223ENST00000529986 C20orf194Q5TEA3 1177 aa9.02□□□□□ -0.97
CTNND1-223ENST00000529986 URI1O94763 535 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-223ENST00000529986 CEP57L1Q8IYX8 460 aa9.01□□□□□ -0.97
CTNND1-223ENST00000529986 KIAA0586Q9BVV6 1533 aa9.01□□□□□ -0.97
CTNND1-223ENST00000529986 MVPQ14764 893 aaKnown RBP9.01□□□□□ -0.97
CTNND1-223ENST00000529986 CALCOCO1Q9P1Z2 691 aa9.01□□□□□ -0.97
CTNND1-223ENST00000529986 PTPN23Q9H3S7 1636 aa9.01□□□□□ -0.97
CTNND1-223ENST00000529986 ERLIN2O94905 339 aa9.01□□□□□ -0.97
CTNND1-223ENST00000529986 GNAI3P08754 354 aa9.01□□□□□ -0.97
CTNND1-223ENST00000529986 PRKAR2BP31323 418 aa9.01□□□□□ -0.97
CTNND1-223ENST00000529986 MAP3K11Q16584 847 aa9.01□□□□□ -0.97
CTNND1-223ENST00000529986 TNNT1P13805 278 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 MEX3CQ5U5Q3 659 aaKnown RBP9□□□□□ -0.97
CTNND1-223ENST00000529986 TNPO1Q92973 898 aaKnown RBP9□□□□□ -0.97
CTNND1-223ENST00000529986 CFAP100Q494V2 611 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 JAKMIP1Q96N16 626 aaKnown RBP9□□□□□ -0.97
CTNND1-223ENST00000529986 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 TANGO6Q9C0B7 1094 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 DYDC1Q8WWB3 177 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 DDX11Q96FC9 970 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 CTDP1Q9Y5B0 961 aaPredicted RBP9□□□□□ -0.97
CTNND1-223ENST00000529986 CBFA2T2O43439 604 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 GNAI2P04899 355 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 NUTM2GQ5VZR2 741 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 SYTL4Q96C24 671 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms