RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 APBB1O00213 710 aa9.75□□□□□ -0.85
CSDE1-212ENST00000529046 ZIC2O95409 532 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-212ENST00000529046 ERICH6Q7L0X2 663 aa9.75□□□□□ -0.85
CSDE1-212ENST00000529046 TRIM46Q7Z4K8 759 aa9.75□□□□□ -0.85
CSDE1-212ENST00000529046 MTMR14Q8NCE2 650 aa9.75□□□□□ -0.85
CSDE1-212ENST00000529046 KIFC2Q96AC6 838 aa9.75□□□□□ -0.85
CSDE1-212ENST00000529046 ITPKCQ96DU7 683 aa9.75□□□□□ -0.85
CSDE1-212ENST00000529046 TRIM47Q96LD4 638 aa9.75□□□□□ -0.85
CSDE1-212ENST00000529046 CCDC116Q8IYX3 515 aa9.74□□□□□ -0.85
CSDE1-212ENST00000529046 KCTD15Q96SI1 283 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-212ENST00000529046 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
CSDE1-212ENST00000529046 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
CSDE1-212ENST00000529046 NBPF20Q3BBV1 942 aa9.72□□□□□ -0.85
CSDE1-212ENST00000529046 DZIP3Q86Y13 1208 aaKnown RBP9.72□□□□□ -0.85
CSDE1-212ENST00000529046 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
CSDE1-212ENST00000529046 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
CSDE1-212ENST00000529046 ZBBXA8MT70 800 aa9.71□□□□□ -0.86
CSDE1-212ENST00000529046 SNRPBP14678 240 aaKnown RBP9.71□□□□□ -0.86
CSDE1-212ENST00000529046 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
CSDE1-212ENST00000529046 SCARF1Q14162 830 aa9.7□□□□□ -0.86
CSDE1-212ENST00000529046 TIMELESSQ9UNS1 1208 aa9.7□□□□□ -0.86
CSDE1-212ENST00000529046 FBXO45P0C2W1 286 aa9.69□□□□□ -0.86
CSDE1-212ENST00000529046 DHX9Q08211 1270 aaKnown RBP9.69□□□□□ -0.86
CSDE1-212ENST00000529046 INTS6LQ5JSJ4 861 aaKnown RBP9.69□□□□□ -0.86
CSDE1-212ENST00000529046 PPP1R26Q5T8A7 1209 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-212ENST00000529046 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
CSDE1-212ENST00000529046 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
CSDE1-212ENST00000529046 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
CSDE1-212ENST00000529046 UPP2O95045 317 aa9.67□□□□□ -0.86
CSDE1-212ENST00000529046 MEIOBQ8N635 442 aa9.67□□□□□ -0.86
CSDE1-212ENST00000529046 PCDHB9Q9Y5E1 797 aa9.67□□□□□ -0.86
CSDE1-212ENST00000529046 GPR37L1O60883 481 aa9.66□□□□□ -0.86
CSDE1-212ENST00000529046 RAB15P59190 212 aa9.66□□□□□ -0.86
CSDE1-212ENST00000529046 NR1H3Q13133 447 aa9.66□□□□□ -0.86
CSDE1-212ENST00000529046 PRM3Q9NNZ6 103 aa9.66□□□□□ -0.86
CSDE1-212ENST00000529046 C6orf118Q5T5N4 469 aa9.65□□□□□ -0.86
CSDE1-212ENST00000529046 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
CSDE1-212ENST00000529046 A6NJR5 290 aa9.64□□□□□ -0.87
CSDE1-212ENST00000529046 ZNF330Q9Y3S2 320 aaPredicted RBP9.64□□□□□ -0.87
CSDE1-212ENST00000529046 ESPNB1AK53 854 aa9.63□□□□□ -0.87
CSDE1-212ENST00000529046 BMP2P12643 396 aa9.63□□□□□ -0.87
CSDE1-212ENST00000529046 TBC1D2BQ9UPU7 963 aa9.63□□□□□ -0.87
CSDE1-212ENST00000529046 CBLBQ13191 982 aa9.62□□□□□ -0.87
CSDE1-212ENST00000529046 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
CSDE1-212ENST00000529046 SEPT12Q8IYM1 358 aa9.62□□□□□ -0.87
CSDE1-212ENST00000529046 ZNF592Q92610 1267 aa9.62□□□□□ -0.87
CSDE1-212ENST00000529046 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
CSDE1-212ENST00000529046 COG6Q9Y2V7 657 aa9.62□□□□□ -0.87
CSDE1-212ENST00000529046 ERVH48-1M5A8F1 160 aa9.61□□□□□ -0.87
CSDE1-212ENST00000529046 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
CSDE1-212ENST00000529046 Q6ZVU0 165 aa9.61□□□□□ -0.87
CSDE1-212ENST00000529046 TMPRSS4Q9NRS4 437 aa9.61□□□□□ -0.87
CSDE1-212ENST00000529046 GIGYF1O75420 1035 aaPredicted RBP9.6□□□□□ -0.87
CSDE1-212ENST00000529046 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
CSDE1-212ENST00000529046 ZNF784Q8NCA9 323 aaPredicted RBP9.6□□□□□ -0.87
CSDE1-212ENST00000529046 ZMYND15Q9H091 742 aa9.6□□□□□ -0.87
CSDE1-212ENST00000529046 POM121Q96HA1 1249 aa9.59□□□□□ -0.87
CSDE1-212ENST00000529046 UBTFP17480 764 aaKnown RBP9.58□□□□□ -0.88
CSDE1-212ENST00000529046 TREML4Q6UXN2 200 aa9.58□□□□□ -0.88
CSDE1-212ENST00000529046 TRIM52Q96A61 297 aa9.58□□□□□ -0.88
CSDE1-212ENST00000529046 SOBPA7XYQ1 873 aa9.57□□□□□ -0.88
CSDE1-212ENST00000529046 MAN1A2O60476 641 aa9.57□□□□□ -0.88
CSDE1-212ENST00000529046 WFS1O76024 890 aa9.57□□□□□ -0.88
CSDE1-212ENST00000529046 RNF20Q5VTR2 975 aa9.57□□□□□ -0.88
CSDE1-212ENST00000529046 TERTO14746 1132 aaKnown RBP9.56□□□□□ -0.88
CSDE1-212ENST00000529046 NFX1Q12986 1120 aaKnown RBP9.56□□□□□ -0.88
CSDE1-212ENST00000529046 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
CSDE1-212ENST00000529046 AGBL1Q96MI9 1066 aa9.56□□□□□ -0.88
CSDE1-212ENST00000529046 GDPD2Q9HCC8 539 aa9.56□□□□□ -0.88
CSDE1-212ENST00000529046 LILRA1O75019 489 aa9.55□□□□□ -0.88
CSDE1-212ENST00000529046 ABL2P42684 1182 aa9.55□□□□□ -0.88
CSDE1-212ENST00000529046 RELBQ01201 579 aa9.55□□□□□ -0.88
CSDE1-212ENST00000529046 IRF5Q13568 498 aa9.55□□□□□ -0.88
CSDE1-212ENST00000529046 CLUAP1Q96AJ1 413 aa9.55□□□□□ -0.88
CSDE1-212ENST00000529046 CYLDQ9NQC7 956 aa9.55□□□□□ -0.88
CSDE1-212ENST00000529046 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
CSDE1-212ENST00000529046 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
CSDE1-212ENST00000529046 SPINT1O43278 529 aa9.54□□□□□ -0.88
CSDE1-212ENST00000529046 ADH1AP07327 375 aa9.54□□□□□ -0.88
CSDE1-212ENST00000529046 TTLL8A6PVC2 850 aa9.53□□□□□ -0.88
CSDE1-212ENST00000529046 ADD1P35611 737 aaKnown RBP9.53□□□□□ -0.88
CSDE1-212ENST00000529046 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.88
CSDE1-212ENST00000529046 DNMT3LQ9UJW3 386 aa9.53□□□□□ -0.88
CSDE1-212ENST00000529046 CCDC180Q9P1Z9 1646 aa9.53□□□□□ -0.88
CSDE1-212ENST00000529046 LOC100996750A0A140TA64 210 aa9.52□□□□□ -0.89
CSDE1-212ENST00000529046 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
CSDE1-212ENST00000529046 PROSER2Q86WR7 435 aaPredicted RBP9.52□□□□□ -0.89
CSDE1-212ENST00000529046 KRTAP4-6Q9BYQ5 205 aa9.52□□□□□ -0.89
CSDE1-212ENST00000529046 RAD21O60216 631 aa9.51□□□□□ -0.89
CSDE1-212ENST00000529046 VAC14Q08AM6 782 aa9.51□□□□□ -0.89
CSDE1-212ENST00000529046 NPAS3Q8IXF0 933 aa9.51□□□□□ -0.89
CSDE1-212ENST00000529046 SLC16A10Q8TF71 515 aa9.51□□□□□ -0.89
CSDE1-212ENST00000529046 ZNF395Q9H8N7 513 aaPredicted RBP9.51□□□□□ -0.89
CSDE1-212ENST00000529046 PCDHB11Q9Y5F2 797 aa9.51□□□□□ -0.89
CSDE1-212ENST00000529046 TRAK2O60296 914 aa9.5□□□□□ -0.89
CSDE1-212ENST00000529046 WASHC4Q2M389 1173 aa9.5□□□□□ -0.89
CSDE1-212ENST00000529046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.5□□□□□ -0.898e-10■□□□□ 9.7
CSDE1-212ENST00000529046 CC2D2BQ6DHV5 1058 aa9.5□□□□□ -0.89
CSDE1-212ENST00000529046 INSM2Q96T92 566 aaPredicted RBP9.5□□□□□ -0.89
CSDE1-212ENST00000529046 POLMQ9NP87 494 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms