RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-222ENST00000527718 ATP7BP35670 1465 aa8.28□□□□□ -1.08
PABPC4-222ENST00000527718 ARHGAP23Q9P227 1491 aa8.28□□□□□ -1.08
PABPC4-222ENST00000527718 WASLO00401 505 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-222ENST00000527718 GPR153Q6NV75 609 aa8.28□□□□□ -1.08
PABPC4-222ENST00000527718 ZNF687Q8N1G0 1237 aa8.28□□□□□ -1.08
PABPC4-222ENST00000527718 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-222ENST00000527718 CDK19Q9BWU1 502 aa8.28□□□□□ -1.08
PABPC4-222ENST00000527718 CIZ1Q9ULV3 898 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-222ENST00000527718 UBR1Q8IWV7 1749 aa8.28□□□□□ -1.08
PABPC4-222ENST00000527718 NSD3Q9BZ95 1437 aa8.28□□□□□ -1.08
PABPC4-222ENST00000527718 MINK1Q8N4C8 1332 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-222ENST00000527718 PPP2R1AP30153 589 aa8.27□□□□□ -1.09
PABPC4-222ENST00000527718 CNGB1Q14028 1251 aaPredicted RBP8.27□□□□□ -1.09
PABPC4-222ENST00000527718 VARS2Q5ST30 1063 aaKnown RBP8.27□□□□□ -1.09
PABPC4-222ENST00000527718 HOMEZQ8IX15 550 aa8.27□□□□□ -1.09
PABPC4-222ENST00000527718 USP32Q8NFA0 1604 aa8.27□□□□□ -1.09
PABPC4-222ENST00000527718 PTCH1Q13635 1447 aa8.27□□□□□ -1.09
PABPC4-222ENST00000527718 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
PABPC4-222ENST00000527718 MED14O60244 1454 aa8.26□□□□□ -1.09
PABPC4-222ENST00000527718 ARHGEF28Q8N1W1 1705 aaKnown RBP8.26□□□□□ -1.09
PABPC4-222ENST00000527718 POLR3AO14802 1390 aaPredicted RBP8.26□□□□□ -1.09
PABPC4-222ENST00000527718 SAFB2Q14151 953 aaKnown RBP eCLIP8.26□□□□□ -1.09
PABPC4-222ENST00000527718 MYO5BQ9ULV0 1848 aa8.26□□□□□ -1.09
PABPC4-222ENST00000527718 CPS1P31327 1500 aa8.25□□□□□ -1.09
PABPC4-222ENST00000527718 SOX12O15370 315 aa8.25□□□□□ -1.09
PABPC4-222ENST00000527718 PTGER2P43116 358 aa8.25□□□□□ -1.09
PABPC4-222ENST00000527718 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
PABPC4-222ENST00000527718 SLC12A5Q9H2X9 1139 aa8.25□□□□□ -1.09
PABPC4-222ENST00000527718 KNDC1Q76NI1 1749 aa8.25□□□□□ -1.09
PABPC4-222ENST00000527718 EDC4Q6P2E9 1401 aaKnown RBP8.24□□□□□ -1.09
PABPC4-222ENST00000527718 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.24□□□□□ -1.09
PABPC4-222ENST00000527718 SMG6Q86US8 1419 aaKnown RBP8.23□□□□□ -1.09
PABPC4-222ENST00000527718 COG3Q96JB2 828 aa8.23□□□□□ -1.09
PABPC4-222ENST00000527718 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
PABPC4-222ENST00000527718 TULP4Q9NRJ4 1543 aa8.23□□□□□ -1.09
PABPC4-222ENST00000527718 ANKARQ7Z5J8 1434 aa8.22□□□□□ -1.09
PABPC4-222ENST00000527718 LTKP29376 864 aa8.22□□□□□ -1.09
PABPC4-222ENST00000527718 CALD1Q05682 793 aaKnown RBP8.22□□□□□ -1.09
PABPC4-222ENST00000527718 NUDT16Q96DE0 195 aaKnown RBP8.22□□□□□ -1.09
PABPC4-222ENST00000527718 CABP1Q9NZU7 370 aa8.22□□□□□ -1.09
PABPC4-222ENST00000527718 TTC21AQ8NDW8 1320 aa8.22□□□□□ -1.09
PABPC4-222ENST00000527718 A0A1W2PP64 1363 aa8.22□□□□□ -1.09
PABPC4-222ENST00000527718 METP08581 1390 aa8.22□□□□□ -1.09
PABPC4-222ENST00000527718 BLMP54132 1417 aaPredicted RBP8.21□□□□□ -1.09
PABPC4-222ENST00000527718 PPIP5K1Q6PFW1 1433 aa8.21□□□□□ -1.09
PABPC4-222ENST00000527718 ADAMTS13Q76LX8 1427 aa8.21□□□□□ -1.09
PABPC4-222ENST00000527718 EIF5BO60841 1220 aaKnown RBP8.21□□□□□ -1.1
PABPC4-222ENST00000527718 CARD14Q9BXL6 1004 aa8.21□□□□□ -1.1
PABPC4-222ENST00000527718 ADGRB2O60241 1585 aa8.21□□□□□ -1.1
PABPC4-222ENST00000527718 MAPK8IP3Q9UPT6 1336 aa8.21□□□□□ -1.1
PABPC4-222ENST00000527718 MYOM1P52179 1685 aa8.21□□□□□ -1.1
PABPC4-222ENST00000527718 NPHP4O75161 1426 aaPredicted RBP8.2□□□□□ -1.1
PABPC4-222ENST00000527718 PLEKHG3A1L390 1219 aa8.2□□□□□ -1.1
PABPC4-222ENST00000527718 WAPLQ7Z5K2 1190 aa8.2□□□□□ -1.1
PABPC4-222ENST00000527718 RNF25Q96BH1 459 aaPredicted RBP8.2□□□□□ -1.1
PABPC4-222ENST00000527718 RUNDC1Q96C34 613 aa8.2□□□□□ -1.1
PABPC4-222ENST00000527718 E9PSI1 815 aa8.19□□□□□ -1.1
PABPC4-222ENST00000527718 HAP1P54257 671 aaPredicted RBP8.19□□□□□ -1.1
PABPC4-222ENST00000527718 LMOD3Q0VAK6 560 aa8.19□□□□□ -1.1
PABPC4-222ENST00000527718 NGDNQ8NEJ9 315 aaKnown RBP8.19□□□□□ -1.1
PABPC4-222ENST00000527718 SLC26A8Q96RN1 970 aa8.19□□□□□ -1.1
PABPC4-222ENST00000527718 AATKQ6ZMQ8 1374 aa8.19□□□□□ -1.1
PABPC4-222ENST00000527718 DIAPH1O60610 1272 aaKnown RBP8.18□□□□□ -1.1
PABPC4-222ENST00000527718 KCNA6P17658 529 aa8.18□□□□□ -1.1
PABPC4-222ENST00000527718 MTHFSP49914 203 aa8.18□□□□□ -1.1
PABPC4-222ENST00000527718 CCDC184Q52MB2 194 aa8.18□□□□□ -1.1
PABPC4-222ENST00000527718 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
PABPC4-222ENST00000527718 ADAMTS8Q9UP79 889 aa8.18□□□□□ -1.1
PABPC4-222ENST00000527718 NCOA3Q9Y6Q9 1424 aa8.18□□□□□ -1.1
PABPC4-222ENST00000527718 NRXN3Q9Y4C0 1643 aa8.18□□□□□ -1.1
PABPC4-222ENST00000527718 TULP1O00294 542 aaPredicted RBP8.17□□□□□ -1.1
PABPC4-222ENST00000527718 RIOK3O14730 519 aaKnown RBP8.17□□□□□ -1.1
PABPC4-222ENST00000527718 FYB1O15117 783 aa8.17□□□□□ -1.1
PABPC4-222ENST00000527718 CCDC27Q2M243 656 aa8.17□□□□□ -1.1
PABPC4-222ENST00000527718 MYH16Q9H6N6 1097 aa8.17□□□□□ -1.1
PABPC4-222ENST00000527718 TAOK2Q9UL54 1235 aa8.17□□□□□ -1.1
PABPC4-222ENST00000527718 ZNF335Q9H4Z2 1342 aaPredicted RBP8.17□□□□□ -1.1
PABPC4-222ENST00000527718 ROBO2Q9HCK4 1378 aa8.17□□□□□ -1.1
PABPC4-222ENST00000527718 CPSF1Q10570 1443 aaKnown RBP8.17□□□□□ -1.1
PABPC4-222ENST00000527718 SETD1AO15047 1707 aaKnown RBP8.17□□□□□ -1.1
PABPC4-222ENST00000527718 FCHSD2O94868 740 aa8.16□□□□□ -1.1
PABPC4-222ENST00000527718 CT47B1P0C2W7 299 aaPredicted RBP8.16□□□□□ -1.1
PABPC4-222ENST00000527718 U2AF1L5P0DN76 240 aaPredicted RBP8.16□□□□□ -1.1
PABPC4-222ENST00000527718 MS4A1P11836 297 aa8.16□□□□□ -1.1
PABPC4-222ENST00000527718 U2AF1Q01081 240 aaKnown RBP eCLIP8.16□□□□□ -1.15e-6■□□□□ 8
PABPC4-222ENST00000527718 KIF24Q5T7B8 1368 aa8.16□□□□□ -1.1
PABPC4-222ENST00000527718 CDC42BPGQ6DT37 1551 aa8.16□□□□□ -1.1
PABPC4-222ENST00000527718 WDR63Q8IWG1 891 aa8.16□□□□□ -1.1
PABPC4-222ENST00000527718 LTBP4Q8N2S1 1624 aa8.16□□□□□ -1.1
PABPC4-222ENST00000527718 SUPT16HQ9Y5B9 1047 aaKnown RBP8.16□□□□□ -1.1
PABPC4-222ENST00000527718 TTC21BQ7Z4L5 1316 aa8.15□□□□□ -1.1
PABPC4-222ENST00000527718 TNNT2P45379 298 aaPredicted RBP8.15□□□□□ -1.1
PABPC4-222ENST00000527718 AAMPQ13685 434 aa8.15□□□□□ -1.1
PABPC4-222ENST00000527718 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.15□□□□□ -1.1
PABPC4-222ENST00000527718 GGNBP2Q9H3C7 697 aa8.15□□□□□ -1.1
PABPC4-222ENST00000527718 PPP4R2Q9NY27 417 aa8.15□□□□□ -1.1
PABPC4-222ENST00000527718 RCAN3Q9UKA8 241 aa8.15□□□□□ -1.1
PABPC4-222ENST00000527718 PHF8Q9UPP1 1060 aa8.15□□□□□ -1.1
PABPC4-222ENST00000527718 NKTRP30414 1462 aaKnown RBP8.14□□□□□ -1.11
PABPC4-222ENST00000527718 PLEKHH1Q9ULM0 1364 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 246.8 ms