RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.46□□□□□ -0.413e-6■■■■□ 25.7
CCDC90B-208ENST00000527025 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
CCDC90B-208ENST00000527025 SLIT3O75094 1523 aa12.46□□□□□ -0.42
CCDC90B-208ENST00000527025 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
CCDC90B-208ENST00000527025 C11orf95C9JLR9 678 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-208ENST00000527025 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-208ENST00000527025 VPS72Q15906 364 aa12.45□□□□□ -0.42
CCDC90B-208ENST00000527025 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
CCDC90B-208ENST00000527025 COL18A1P39060 1754 aa12.45□□□□□ -0.42
CCDC90B-208ENST00000527025 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
CCDC90B-208ENST00000527025 EP400Q96L91 3159 aa12.44□□□□□ -0.42
CCDC90B-208ENST00000527025 TMF1P82094 1093 aa12.44□□□□□ -0.42
CCDC90B-208ENST00000527025 MYOM1P52179 1685 aa12.44□□□□□ -0.42
CCDC90B-208ENST00000527025 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
CCDC90B-208ENST00000527025 CPDO75976 1380 aa12.43□□□□□ -0.42
CCDC90B-208ENST00000527025 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-208ENST00000527025 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
CCDC90B-208ENST00000527025 USP54Q70EL1 1684 aa12.42□□□□□ -0.42
CCDC90B-208ENST00000527025 CARD14Q9BXL6 1004 aa12.42□□□□□ -0.42
CCDC90B-208ENST00000527025 AXIN2Q9Y2T1 843 aa12.42□□□□□ -0.42
CCDC90B-208ENST00000527025 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
CCDC90B-208ENST00000527025 USP31Q70CQ4 1352 aa12.42□□□□□ -0.42
CCDC90B-208ENST00000527025 NFAT5O94916 1531 aa12.42□□□□□ -0.42
CCDC90B-208ENST00000527025 SOX12O15370 315 aa12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 FBLN1P23142 703 aa12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 EDC4Q6P2E9 1401 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 HDGFL2Q7Z4V5 671 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 TERF2IPQ9NYB0 399 aa12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
CCDC90B-208ENST00000527025 SPATA31A5Q5VU36 1347 aa12.4□□□□□ -0.42
CCDC90B-208ENST00000527025 SPATA31A7Q8IWB4 1347 aa12.4□□□□□ -0.42
CCDC90B-208ENST00000527025 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
CCDC90B-208ENST00000527025 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-208ENST00000527025 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.42
CCDC90B-208ENST00000527025 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC90B-208ENST00000527025 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
CCDC90B-208ENST00000527025 ANKRD36BQ8N2N9 1353 aa12.4□□□□□ -0.42
CCDC90B-208ENST00000527025 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
CCDC90B-208ENST00000527025 SEPT12Q8IYM1 358 aa12.39□□□□□ -0.43
CCDC90B-208ENST00000527025 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-208ENST00000527025 NINLQ9Y2I6 1382 aa12.39□□□□□ -0.43
CCDC90B-208ENST00000527025 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
CCDC90B-208ENST00000527025 OVOS2A0A0J9YW53 1432 aa12.38□□□□□ -0.43
CCDC90B-208ENST00000527025 OVOS2Q6IE36 1432 aa12.38□□□□□ -0.43
CCDC90B-208ENST00000527025 FYB1O15117 783 aa12.38□□□□□ -0.43
CCDC90B-208ENST00000527025 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-208ENST00000527025 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
CCDC90B-208ENST00000527025 COL5A2P05997 1499 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-208ENST00000527025 LTN1O94822 1766 aa12.37□□□□□ -0.43
CCDC90B-208ENST00000527025 THSD7AQ9UPZ6 1657 aa12.36□□□□□ -0.43
CCDC90B-208ENST00000527025 KCNH5Q8NCM2 988 aa12.36□□□□□ -0.43
CCDC90B-208ENST00000527025 USP35Q9P2H5 1018 aa12.36□□□□□ -0.43
CCDC90B-208ENST00000527025 EVA1CP58658 441 aa12.35□□□□□ -0.43
CCDC90B-208ENST00000527025 CDCA8Q53HL2 280 aa12.35□□□□□ -0.43
CCDC90B-208ENST00000527025 GGNBP2Q9H3C7 697 aa12.35□□□□□ -0.43
CCDC90B-208ENST00000527025 FAM182BQ5T319 152 aa12.34□□□□□ -0.43
CCDC90B-208ENST00000527025 POLR3GLQ9BT43 218 aa12.34□□□□□ -0.43
CCDC90B-208ENST00000527025 KIF20BQ96Q89 1820 aa12.32□□□□□ -0.44
CCDC90B-208ENST00000527025 NSD3Q9BZ95 1437 aa12.32□□□□□ -0.44
CCDC90B-208ENST00000527025 CRB1P82279 1406 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 KRT27Q7Z3Y8 459 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 TCP11L2Q8N4U5 519 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 COG3Q96JB2 828 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 PANK3Q9H999 370 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 KIF7Q2M1P5 1343 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 MAP3K19Q56UN5 1328 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 WDR17Q8IZU2 1322 aa12.31□□□□□ -0.44
CCDC90B-208ENST00000527025 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
CCDC90B-208ENST00000527025 RGPD2P0DJD1 1756 aa12.29□□□□□ -0.44
CCDC90B-208ENST00000527025 A0A0G2JS52 829 aa12.29□□□□□ -0.44
CCDC90B-208ENST00000527025 MYT1Q01538 1121 aa12.29□□□□□ -0.44
CCDC90B-208ENST00000527025 RRS1Q15050 365 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-208ENST00000527025 TOM1L2Q6ZVM7 507 aa12.29□□□□□ -0.44
CCDC90B-208ENST00000527025 WNK3Q9BYP7 1800 aa12.28□□□□□ -0.44
CCDC90B-208ENST00000527025 ABCC6O95255 1503 aa12.28□□□□□ -0.44
CCDC90B-208ENST00000527025 IP6K1Q92551 441 aa12.28□□□□□ -0.44
CCDC90B-208ENST00000527025 ERBB3P21860 1342 aa12.28□□□□□ -0.44
CCDC90B-208ENST00000527025 PARP4Q9UKK3 1724 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-208ENST00000527025 HOXC9P31274 260 aa12.27□□□□□ -0.45
CCDC90B-208ENST00000527025 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
CCDC90B-208ENST00000527025 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
CCDC90B-208ENST00000527025 CARD10Q9BWT7 1032 aa12.27□□□□□ -0.45
CCDC90B-208ENST00000527025 THRAP3Q9Y2W1 955 aaKnown RBP12.27□□□□□ -0.45
CCDC90B-208ENST00000527025 WASHC2AQ641Q2 1341 aa12.27□□□□□ -0.45
CCDC90B-208ENST00000527025 LRRC37A3O60309 1634 aa12.26□□□□□ -0.45
CCDC90B-208ENST00000527025 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
CCDC90B-208ENST00000527025 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-208ENST00000527025 LTV1Q96GA3 475 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-208ENST00000527025 DISP2A7MBM2 1401 aa12.26□□□□□ -0.45
CCDC90B-208ENST00000527025 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
CCDC90B-208ENST00000527025 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
CCDC90B-208ENST00000527025 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
CCDC90B-208ENST00000527025 EMILIN1Q9Y6C2 1016 aa12.25□□□□□ -0.45
CCDC90B-208ENST00000527025 BLMP54132 1417 aaPredicted RBP12.24□□□□□ -0.45
CCDC90B-208ENST00000527025 PTF1AQ7RTS3 328 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms