RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 STRN4Q9NRL3 753 aa22.35■■□□□ 1.17
CHD7-204ENST00000526846 AXIN2Q9Y2T1 843 aa22.35■■□□□ 1.17
CHD7-204ENST00000526846 SOX12O15370 315 aa22.34■■□□□ 1.17
CHD7-204ENST00000526846 FYB1O15117 783 aa22.33■■□□□ 1.17
CHD7-204ENST00000526846 LARP1Q6PKG0 1096 aaKnown RBP22.33■■□□□ 1.17
CHD7-204ENST00000526846 SEPT12Q8IYM1 358 aa22.33■■□□□ 1.17
CHD7-204ENST00000526846 PARP4Q9UKK3 1724 aaKnown RBP22.33■■□□□ 1.17
CHD7-204ENST00000526846 CRB1P82279 1406 aa22.31■■□□□ 1.16
CHD7-204ENST00000526846 ZBTB7CA1YPR0 619 aa22.31■■□□□ 1.16
CHD7-204ENST00000526846 FAM98CQ17RN3 349 aaKnown RBP22.31■■□□□ 1.16
CHD7-204ENST00000526846 UPF1Q92900 1129 aaKnown RBP eCLIP22.31■■□□□ 1.16
CHD7-204ENST00000526846 EVA1CP58658 441 aa22.29■■□□□ 1.16
CHD7-204ENST00000526846 COG3Q96JB2 828 aa22.29■■□□□ 1.16
CHD7-204ENST00000526846 GGNBP2Q9H3C7 697 aa22.29■■□□□ 1.16
CHD7-204ENST00000526846 FAM208AQ9UK61 1670 aaKnown RBP22.29■■□□□ 1.16
CHD7-204ENST00000526846 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
CHD7-204ENST00000526846 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
CHD7-204ENST00000526846 KIF7Q2M1P5 1343 aa22.28■■□□□ 1.16
CHD7-204ENST00000526846 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
CHD7-204ENST00000526846 BARGINQ6ZT62 677 aa22.27■■□□□ 1.16
CHD7-204ENST00000526846 RGPD2P0DJD1 1756 aa22.27■■□□□ 1.16
CHD7-204ENST00000526846 LRRC37A3O60309 1634 aa22.27■■□□□ 1.16
CHD7-204ENST00000526846 MAP2P11137 1827 aaKnown RBP22.27■■□□□ 1.15
CHD7-204ENST00000526846 BLMP54132 1417 aaPredicted RBP22.24■■□□□ 1.15
CHD7-204ENST00000526846 FBLN1P23142 703 aa22.24■■□□□ 1.15
CHD7-204ENST00000526846 TCP11L2Q8N4U5 519 aa22.24■■□□□ 1.15
CHD7-204ENST00000526846 USP35Q9P2H5 1018 aa22.24■■□□□ 1.15
CHD7-204ENST00000526846 THRAP3Q9Y2W1 955 aaKnown RBP22.24■■□□□ 1.15
CHD7-204ENST00000526846 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
CHD7-204ENST00000526846 ERBB3P21860 1342 aa22.23■■□□□ 1.15
CHD7-204ENST00000526846 KRT27Q7Z3Y8 459 aa22.22■■□□□ 1.15
CHD7-204ENST00000526846 PANK3Q9H999 370 aa22.22■■□□□ 1.15
CHD7-204ENST00000526846 DISP2A7MBM2 1401 aa22.22■■□□□ 1.15
CHD7-204ENST00000526846 IP6K1Q92551 441 aa22.21■■□□□ 1.15
CHD7-204ENST00000526846 RTL1A6NKG5 1358 aa22.21■■□□□ 1.15
CHD7-204ENST00000526846 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
CHD7-204ENST00000526846 CGNL1Q0VF96 1302 aa22.2■■□□□ 1.14
CHD7-204ENST00000526846 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
CHD7-204ENST00000526846 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
CHD7-204ENST00000526846 A0A0G2JS52 829 aa22.19■■□□□ 1.14
CHD7-204ENST00000526846 MYT1Q01538 1121 aa22.19■■□□□ 1.14
CHD7-204ENST00000526846 CARD10Q9BWT7 1032 aa22.19■■□□□ 1.14
CHD7-204ENST00000526846 RGPD1P0DJD0 1748 aa22.18■■□□□ 1.14
CHD7-204ENST00000526846 HOXC9P31274 260 aa22.18■■□□□ 1.14
CHD7-204ENST00000526846 SBF2Q86WG5 1849 aa22.17■■□□□ 1.14
CHD7-204ENST00000526846 WASHC2AQ641Q2 1341 aa22.17■■□□□ 1.14
CHD7-204ENST00000526846 RRS1Q15050 365 aaKnown RBP22.17■■□□□ 1.14
CHD7-204ENST00000526846 ANKRD24Q8TF21 1146 aa22.17■■□□□ 1.14
CHD7-204ENST00000526846 KIF24Q5T7B8 1368 aa22.15■■□□□ 1.14
CHD7-204ENST00000526846 NSD2O96028 1365 aa22.14■■□□□ 1.14
CHD7-204ENST00000526846 CSB-PGBD3P0DP91 1061 aa22.14■■□□□ 1.13
CHD7-204ENST00000526846 FAM182BQ5T319 152 aa22.13■■□□□ 1.13
CHD7-204ENST00000526846 FLT4P35916 1363 aa22.12■■□□□ 1.13
CHD7-204ENST00000526846 SHANK3Q9BYB0 1731 aa22.12■■□□□ 1.13
CHD7-204ENST00000526846 AMPHP49418 695 aa22.12■■□□□ 1.13
CHD7-204ENST00000526846 INSRP06213 1382 aa22.12■■□□□ 1.13
CHD7-204ENST00000526846 EMILIN1Q9Y6C2 1016 aa22.11■■□□□ 1.13
CHD7-204ENST00000526846 PER1O15534 1290 aaPredicted RBP22.1■■□□□ 1.13
CHD7-204ENST00000526846 AMER1Q5JTC6 1135 aaPredicted RBP22.1■■□□□ 1.13
CHD7-204ENST00000526846 CCDC125Q86Z20 511 aa22.1■■□□□ 1.13
CHD7-204ENST00000526846 TNS2Q63HR2 1409 aa22.09■■□□□ 1.13
CHD7-204ENST00000526846 SMG6Q86US8 1419 aaKnown RBP22.09■■□□□ 1.13
CHD7-204ENST00000526846 CDCA7Q9BWT1 371 aaPredicted RBP22.09■■□□□ 1.13
CHD7-204ENST00000526846 NLRP2Q9NX02 1062 aa22.09■■□□□ 1.13
CHD7-204ENST00000526846 HSP90AB2PQ58FF8 381 aa22.07■■□□□ 1.12
CHD7-204ENST00000526846 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
CHD7-204ENST00000526846 POLKQ9UBT6 870 aa22.07■■□□□ 1.12
CHD7-204ENST00000526846 PDE3BQ13370 1112 aa22.06■■□□□ 1.12
CHD7-204ENST00000526846 DDB1Q16531 1140 aa22.06■■□□□ 1.12
CHD7-204ENST00000526846 KNSTRNQ9Y448 316 aa22.06■■□□□ 1.12
CHD7-204ENST00000526846 OVOS2A0A0G2JMS6 1433 aa22.06■■□□□ 1.12
CHD7-204ENST00000526846 NCAPD2Q15021 1401 aa22.06■■□□□ 1.12
CHD7-204ENST00000526846 FAM196AQ6ZSG2 479 aa22.05■■□□□ 1.12
CHD7-204ENST00000526846 BCL9O00512 1426 aa22.05■■□□□ 1.12
CHD7-204ENST00000526846 MEGF6O75095 1541 aa22.03■■□□□ 1.12
CHD7-204ENST00000526846 IL2RBP14784 551 aa22.03■■□□□ 1.12
CHD7-204ENST00000526846 NBPF6Q5VWK0 638 aa22.03■■□□□ 1.12
CHD7-204ENST00000526846 MARCH10Q8NA82 808 aaPredicted RBP22.03■■□□□ 1.12
CHD7-204ENST00000526846 NBPF4Q96M43 638 aa22.03■■□□□ 1.12
CHD7-204ENST00000526846 NPC1L1Q9UHC9 1359 aa22.02■■□□□ 1.12
CHD7-204ENST00000526846 PKD1L3Q7Z443 1732 aa22.01■■□□□ 1.11
CHD7-204ENST00000526846 TNNT2P45379 298 aaPredicted RBP22.01■■□□□ 1.11
CHD7-204ENST00000526846 NHSQ6T4R5 1651 aa22.01■■□□□ 1.11
CHD7-204ENST00000526846 RREB1Q92766 1687 aa22.01■■□□□ 1.11
CHD7-204ENST00000526846 RGPD3A6NKT7 1758 aaPredicted RBP22■■□□□ 1.11
CHD7-204ENST00000526846 RGPD4Q7Z3J3 1758 aa22■■□□□ 1.11
CHD7-204ENST00000526846 DEFB132Q7Z7B7 95 aa22■■□□□ 1.11
CHD7-204ENST00000526846 MORC1Q86VD1 984 aa21.99■■□□□ 1.11
CHD7-204ENST00000526846 EXOC5O00471 708 aa21.98■■□□□ 1.11
CHD7-204ENST00000526846 PPM1GO15355 546 aaPredicted RBP21.97■■□□□ 1.11
CHD7-204ENST00000526846 TRIM37O94972 964 aa21.97■■□□□ 1.11
CHD7-204ENST00000526846 USHBP1Q8N6Y0 703 aa21.97■■□□□ 1.11
CHD7-204ENST00000526846 DOT1LQ8TEK3 1739 aa21.95■■□□□ 1.1
CHD7-204ENST00000526846 SF3B2Q13435 895 aaKnown RBP21.95■■□□□ 1.1
CHD7-204ENST00000526846 NUP188Q5SRE5 1749 aa21.94■■□□□ 1.1
CHD7-204ENST00000526846 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
CHD7-204ENST00000526846 BTAF1O14981 1849 aa21.94■■□□□ 1.1
CHD7-204ENST00000526846 KAT6BQ8WYB5 2073 aa21.94■■□□□ 1.1
CHD7-204ENST00000526846 BAG6P46379 1132 aa21.93■■□□□ 1.1
CHD7-204ENST00000526846 CC2D1BQ5T0F9 858 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms