RNA–Protein interactions for RNA: ENST00000526567.5

ATM-209, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene ATM, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-209ENST00000526567 HNRNPUQ00839 825 aaKnown RBP eCLIP11.97□□□□□ -0.49
ATM-209ENST00000526567 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
ATM-209ENST00000526567 POTEHQ6S545 545 aa11.97□□□□□ -0.49
ATM-209ENST00000526567 ARHGEF10O15013 1369 aa11.96□□□□□ -0.49
ATM-209ENST00000526567 LTN1O94822 1766 aa11.96□□□□□ -0.49
ATM-209ENST00000526567 ABCA3Q99758 1704 aa11.96□□□□□ -0.49
ATM-209ENST00000526567 FLT4P35916 1363 aa11.95□□□□□ -0.5
ATM-209ENST00000526567 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
ATM-209ENST00000526567 COL16A1Q07092 1604 aaPredicted RBP11.95□□□□□ -0.5
ATM-209ENST00000526567 RTL1A6NKG5 1358 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 GCP02774 474 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 IL13P35225 146 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 RGPD1P0DJD0 1748 aa11.94□□□□□ -0.5
ATM-209ENST00000526567 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
ATM-209ENST00000526567 TOM1O60784 492 aa11.93□□□□□ -0.5
ATM-209ENST00000526567 MYCNP04198 464 aaPredicted RBP11.93□□□□□ -0.5
ATM-209ENST00000526567 HOXC9P31274 260 aa11.93□□□□□ -0.5
ATM-209ENST00000526567 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
ATM-209ENST00000526567 CCDC146Q8IYE0 955 aa11.93□□□□□ -0.5
ATM-209ENST00000526567 KCNH5Q8NCM2 988 aa11.93□□□□□ -0.5
ATM-209ENST00000526567 PHLPP1O60346 1717 aa11.93□□□□□ -0.5
ATM-209ENST00000526567 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
ATM-209ENST00000526567 ZBTB7CA1YPR0 619 aa11.92□□□□□ -0.5
ATM-209ENST00000526567 U2AF1L5P0DN76 240 aaPredicted RBP11.92□□□□□ -0.5
ATM-209ENST00000526567 U2AF1Q01081 240 aaKnown RBP eCLIP11.92□□□□□ -0.5
ATM-209ENST00000526567 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
ATM-209ENST00000526567 COL22A1Q8NFW1 1626 aaPredicted RBP11.91□□□□□ -0.5
ATM-209ENST00000526567 AMPHP49418 695 aa11.91□□□□□ -0.5
ATM-209ENST00000526567 NUDCQ9Y266 331 aa11.91□□□□□ -0.5
ATM-209ENST00000526567 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.5
ATM-209ENST00000526567 COL18A1P39060 1754 aa11.9□□□□□ -0.5
ATM-209ENST00000526567 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
ATM-209ENST00000526567 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
ATM-209ENST00000526567 IP6K1Q92551 441 aa11.89□□□□□ -0.51
ATM-209ENST00000526567 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
ATM-209ENST00000526567 CPDO75976 1380 aa11.89□□□□□ -0.51
ATM-209ENST00000526567 KIAA0232Q92628 1395 aa11.89□□□□□ -0.51
ATM-209ENST00000526567 ABCC6O95255 1503 aa11.88□□□□□ -0.51
ATM-209ENST00000526567 HMOX1P09601 288 aa11.88□□□□□ -0.51
ATM-209ENST00000526567 PLEKHF1Q96S99 279 aa11.88□□□□□ -0.51
ATM-209ENST00000526567 SALL2Q9Y467 1007 aaPredicted RBP11.88□□□□□ -0.51
ATM-209ENST00000526567 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
ATM-209ENST00000526567 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
ATM-209ENST00000526567 APAF1O14727 1248 aa11.87□□□□□ -0.51
ATM-209ENST00000526567 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
ATM-209ENST00000526567 RUNDC1Q96C34 613 aa11.87□□□□□ -0.51
ATM-209ENST00000526567 LTV1Q96GA3 475 aaPredicted RBP11.87□□□□□ -0.51
ATM-209ENST00000526567 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
ATM-209ENST00000526567 CAMTA1Q9Y6Y1 1673 aa11.87□□□□□ -0.51
ATM-209ENST00000526567 PRKAR2BP31323 418 aa11.86□□□□□ -0.51
ATM-209ENST00000526567 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
ATM-209ENST00000526567 EYA1Q99502 592 aa11.86□□□□□ -0.51
ATM-209ENST00000526567 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
ATM-209ENST00000526567 RGPD5Q99666 1765 aa11.86□□□□□ -0.51
ATM-209ENST00000526567 RGPD2P0DJD1 1756 aa11.85□□□□□ -0.51
ATM-209ENST00000526567 KDRP35968 1356 aa11.85□□□□□ -0.51
ATM-209ENST00000526567 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
ATM-209ENST00000526567 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
ATM-209ENST00000526567 RRP7AQ9Y3A4 280 aaKnown RBP11.85□□□□□ -0.51
ATM-209ENST00000526567 FCHSD2O94868 740 aa11.84□□□□□ -0.51
ATM-209ENST00000526567 TCP11L2Q8N4U5 519 aa11.84□□□□□ -0.51
ATM-209ENST00000526567 USHBP1Q8N6Y0 703 aa11.84□□□□□ -0.51
ATM-209ENST00000526567 ANKRD24Q8TF21 1146 aa11.84□□□□□ -0.51
ATM-209ENST00000526567 NCAPD2Q15021 1401 aa11.84□□□□□ -0.51
ATM-209ENST00000526567 ERBB3P21860 1342 aa11.84□□□□□ -0.51
ATM-209ENST00000526567 ZNF521Q96K83 1311 aa11.84□□□□□ -0.51
ATM-209ENST00000526567 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
ATM-209ENST00000526567 NBPF6Q5VWK0 638 aa11.83□□□□□ -0.52
ATM-209ENST00000526567 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
ATM-209ENST00000526567 NBPF4Q96M43 638 aa11.83□□□□□ -0.52
ATM-209ENST00000526567 PRDM11Q9NQV5 511 aa11.83□□□□□ -0.52
ATM-209ENST00000526567 FAM208AQ9UK61 1670 aaKnown RBP11.82□□□□□ -0.52
ATM-209ENST00000526567 MAPK8IP3Q9UPT6 1336 aa11.82□□□□□ -0.52
ATM-209ENST00000526567 COL5A2P05997 1499 aaPredicted RBP11.82□□□□□ -0.52
ATM-209ENST00000526567 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
ATM-209ENST00000526567 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
ATM-209ENST00000526567 COL14A1Q05707 1796 aaKnown RBP11.8□□□□□ -0.52
ATM-209ENST00000526567 POLA2Q14181 598 aa11.8□□□□□ -0.52
ATM-209ENST00000526567 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
ATM-209ENST00000526567 JCADQ9P266 1359 aa11.79□□□□□ -0.52
ATM-209ENST00000526567 PLCH1Q4KWH8 1693 aa11.79□□□□□ -0.52
ATM-209ENST00000526567 FAM83GA6ND36 823 aa11.79□□□□□ -0.52
ATM-209ENST00000526567 HSPA1LP34931 641 aa11.79□□□□□ -0.52
ATM-209ENST00000526567 NFE2L2Q16236 605 aa11.79□□□□□ -0.52
ATM-209ENST00000526567 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
ATM-209ENST00000526567 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
ATM-209ENST00000526567 LRP6O75581 1613 aa11.78□□□□□ -0.52
ATM-209ENST00000526567 WWC1Q8IX03 1113 aa11.78□□□□□ -0.52
ATM-209ENST00000526567 MEGF6O75095 1541 aa11.77□□□□□ -0.52
ATM-209ENST00000526567 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
ATM-209ENST00000526567 CSB-PGBD3P0DP91 1061 aa11.77□□□□□ -0.53
ATM-209ENST00000526567 CCDC27Q2M243 656 aa11.77□□□□□ -0.53
ATM-209ENST00000526567 WDR17Q8IZU2 1322 aa11.77□□□□□ -0.53
ATM-209ENST00000526567 NRAPQ86VF7 1730 aa11.77□□□□□ -0.53
ATM-209ENST00000526567 DLG5Q8TDM6 1919 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms