RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ARXQ96QS3 562 aa15.94■□□□□ 0.14
NEDD8-204ENST00000526430 HIRIP3Q9BW71 556 aaPredicted RBP15.94■□□□□ 0.14
NEDD8-204ENST00000526430 NHSQ6T4R5 1651 aa15.93■□□□□ 0.14
NEDD8-204ENST00000526430 USP19O94966 1318 aa15.93■□□□□ 0.14
NEDD8-204ENST00000526430 COL18A1P39060 1754 aa15.92■□□□□ 0.14
NEDD8-204ENST00000526430 POLR3AO14802 1390 aaPredicted RBP15.92■□□□□ 0.14
NEDD8-204ENST00000526430 PTF1AQ7RTS3 328 aa15.92■□□□□ 0.14
NEDD8-204ENST00000526430 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
NEDD8-204ENST00000526430 DDB1Q16531 1140 aa15.91■□□□□ 0.14
NEDD8-204ENST00000526430 GPR162Q16538 588 aa15.91■□□□□ 0.14
NEDD8-204ENST00000526430 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
NEDD8-204ENST00000526430 RGPD5Q99666 1765 aa15.9■□□□□ 0.14
NEDD8-204ENST00000526430 NUTM2GQ5VZR2 741 aa15.88■□□□□ 0.13
NEDD8-204ENST00000526430 BTAF1O14981 1849 aa15.88■□□□□ 0.13
NEDD8-204ENST00000526430 TUBGCP6Q96RT7 1819 aa15.88■□□□□ 0.13
NEDD8-204ENST00000526430 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
NEDD8-204ENST00000526430 TRAK1Q9UPV9 953 aa15.87■□□□□ 0.13
NEDD8-204ENST00000526430 MARCH10Q8NA82 808 aaPredicted RBP15.86■□□□□ 0.13
NEDD8-204ENST00000526430 NUDT16Q96DE0 195 aaKnown RBP15.86■□□□□ 0.13
NEDD8-204ENST00000526430 CDCA7Q9BWT1 371 aaPredicted RBP15.86■□□□□ 0.13
NEDD8-204ENST00000526430 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
NEDD8-204ENST00000526430 SLIT3O75094 1523 aa15.84■□□□□ 0.13
NEDD8-204ENST00000526430 GCP02774 474 aa15.84■□□□□ 0.13
NEDD8-204ENST00000526430 HSPA6P17066 643 aa15.84■□□□□ 0.13
NEDD8-204ENST00000526430 ABTB2Q8N961 1025 aa15.84■□□□□ 0.13
NEDD8-204ENST00000526430 NLRP13Q86W25 1043 aa15.83■□□□□ 0.12
NEDD8-204ENST00000526430 ACEP12821 1306 aa15.83■□□□□ 0.12
NEDD8-204ENST00000526430 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.12
NEDD8-204ENST00000526430 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
NEDD8-204ENST00000526430 PLEKHG3A1L390 1219 aa15.81■□□□□ 0.12
NEDD8-204ENST00000526430 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
NEDD8-204ENST00000526430 ABCC6O95255 1503 aa15.8■□□□□ 0.12
NEDD8-204ENST00000526430 WDR17Q8IZU2 1322 aa15.8■□□□□ 0.12
NEDD8-204ENST00000526430 SLC16A10Q8TF71 515 aa15.8■□□□□ 0.12
NEDD8-204ENST00000526430 GRIN3BO60391 1043 aa15.79■□□□□ 0.12
NEDD8-204ENST00000526430 TOM1L2Q6ZVM7 507 aa15.79■□□□□ 0.12
NEDD8-204ENST00000526430 CCDC61Q9Y6R9 512 aa15.79■□□□□ 0.12
NEDD8-204ENST00000526430 TNS2Q63HR2 1409 aa15.78■□□□□ 0.12
NEDD8-204ENST00000526430 PIK3C2AO00443 1686 aa15.78■□□□□ 0.12
NEDD8-204ENST00000526430 ADCY9O60503 1353 aa15.77■□□□□ 0.12
NEDD8-204ENST00000526430 QRICH2Q9H0J4 1663 aa15.77■□□□□ 0.12
NEDD8-204ENST00000526430 POLD1P28340 1107 aa15.77■□□□□ 0.12
NEDD8-204ENST00000526430 PELP1Q8IZL8 1130 aaKnown RBP15.77■□□□□ 0.12
NEDD8-204ENST00000526430 CDK19Q9BWU1 502 aa15.76■□□□□ 0.11
NEDD8-204ENST00000526430 YBX3P16989 372 aaKnown RBP eCLIP15.75■□□□□ 0.11
NEDD8-204ENST00000526430 ZNF827Q17R98 1081 aa15.75■□□□□ 0.11
NEDD8-204ENST00000526430 GPBP1L1Q9HC44 474 aaPredicted RBP15.75■□□□□ 0.11
NEDD8-204ENST00000526430 CPSF1Q10570 1443 aaKnown RBP15.75■□□□□ 0.11
NEDD8-204ENST00000526430 NLGN2Q8NFZ4 835 aa15.74■□□□□ 0.11
NEDD8-204ENST00000526430 CARD10Q9BWT7 1032 aa15.74■□□□□ 0.11
NEDD8-204ENST00000526430 LY75O60449 1722 aa15.74■□□□□ 0.11
NEDD8-204ENST00000526430 EXOC5O00471 708 aa15.73■□□□□ 0.11
NEDD8-204ENST00000526430 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
NEDD8-204ENST00000526430 KIAA1210Q9ULL0 1709 aa15.73■□□□□ 0.11
NEDD8-204ENST00000526430 USP6P35125 1406 aa15.72■□□□□ 0.11
NEDD8-204ENST00000526430 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
NEDD8-204ENST00000526430 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
NEDD8-204ENST00000526430 CCDC7Q96M83 1385 aa15.72■□□□□ 0.11
NEDD8-204ENST00000526430 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
NEDD8-204ENST00000526430 L3MBTL2Q969R5 705 aa15.71■□□□□ 0.11
NEDD8-204ENST00000526430 STAC3Q96MF2 364 aa15.71■□□□□ 0.11
NEDD8-204ENST00000526430 AXIN2Q9Y2T1 843 aa15.71■□□□□ 0.11
NEDD8-204ENST00000526430 PNPLA7Q6ZV29 1317 aa15.7■□□□□ 0.1
NEDD8-204ENST00000526430 LRRC4BQ9NT99 713 aa15.7■□□□□ 0.1
NEDD8-204ENST00000526430 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
NEDD8-204ENST00000526430 WDR90Q96KV7 1748 aa15.69■□□□□ 0.1
NEDD8-204ENST00000526430 ZBTB7CA1YPR0 619 aa15.69■□□□□ 0.1
NEDD8-204ENST00000526430 NLRP6P59044 892 aa15.68■□□□□ 0.1
NEDD8-204ENST00000526430 SLC27A3Q5K4L6 730 aa15.68■□□□□ 0.1
NEDD8-204ENST00000526430 APLP1P51693 650 aa15.67■□□□□ 0.1
NEDD8-204ENST00000526430 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
NEDD8-204ENST00000526430 DCAF11Q8TEB1 546 aa15.67■□□□□ 0.1
NEDD8-204ENST00000526430 ARHGEF25Q86VW2 580 aa15.66■□□□□ 0.1
NEDD8-204ENST00000526430 ACSBG1Q96GR2 724 aa15.66■□□□□ 0.1
NEDD8-204ENST00000526430 NFAT5O94916 1531 aa15.66■□□□□ 0.1
NEDD8-204ENST00000526430 LTN1O94822 1766 aa15.66■□□□□ 0.1
NEDD8-204ENST00000526430 DNAJC5GQ8N7S2 189 aa15.65■□□□□ 0.1
NEDD8-204ENST00000526430 KDM2AQ9Y2K7 1162 aa15.65■□□□□ 0.1
NEDD8-204ENST00000526430 CSB-PGBD3P0DP91 1061 aa15.64■□□□□ 0.09
NEDD8-204ENST00000526430 DOT1LQ8TEK3 1739 aa15.64■□□□□ 0.09
NEDD8-204ENST00000526430 USP54Q70EL1 1684 aa15.63■□□□□ 0.09
NEDD8-204ENST00000526430 KIF3CO14782 793 aa15.63■□□□□ 0.09
NEDD8-204ENST00000526430 KCNH5Q8NCM2 988 aa15.63■□□□□ 0.09
NEDD8-204ENST00000526430 CICQ96RK0 1608 aaPredicted RBP15.62■□□□□ 0.09
NEDD8-204ENST00000526430 TAF1LQ8IZX4 1826 aa15.62■□□□□ 0.09
NEDD8-204ENST00000526430 TFCP2L1Q9NZI6 479 aa15.62■□□□□ 0.09
NEDD8-204ENST00000526430 FAM208AQ9UK61 1670 aaKnown RBP15.61■□□□□ 0.09
NEDD8-204ENST00000526430 ZNF526Q8TF50 670 aaPredicted RBP15.61■□□□□ 0.09
NEDD8-204ENST00000526430 CD2APQ9Y5K6 639 aa15.61■□□□□ 0.09
NEDD8-204ENST00000526430 C5P01031 1676 aa15.6■□□□□ 0.09
NEDD8-204ENST00000526430 SRPK2P78362 688 aaKnown RBP15.59■□□□□ 0.09
NEDD8-204ENST00000526430 PCNTO95613 3336 aa15.59■□□□□ 0.09
NEDD8-204ENST00000526430 PRELPP51888 382 aa15.58■□□□□ 0.08
NEDD8-204ENST00000526430 COL13A1Q5TAT6 717 aaPredicted RBP15.58■□□□□ 0.08
NEDD8-204ENST00000526430 MON2Q7Z3U7 1717 aa15.57■□□□□ 0.08
NEDD8-204ENST00000526430 IL2RBP14784 551 aa15.57■□□□□ 0.08
NEDD8-204ENST00000526430 TIMELESSQ9UNS1 1208 aa15.57■□□□□ 0.08
NEDD8-204ENST00000526430 ERBB3P21860 1342 aa15.57■□□□□ 0.08
NEDD8-204ENST00000526430 NBPF1Q3BBV0 1214 aa15.56■□□□□ 0.08
NEDD8-204ENST00000526430 JMYQ8N9B5 988 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms