RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 OVOS2A0A0G2JMS6 1433 aa15.33■□□□□ 0.04
VPS26B-203ENST00000525918 OVOS2A0A0J9YW53 1432 aa15.33■□□□□ 0.04
VPS26B-203ENST00000525918 OVOS2Q6IE36 1432 aa15.33■□□□□ 0.04
VPS26B-203ENST00000525918 DDB1Q16531 1140 aa15.32■□□□□ 0.04
VPS26B-203ENST00000525918 KCNH5Q8NCM2 988 aa15.31■□□□□ 0.04
VPS26B-203ENST00000525918 SIN3AQ96ST3 1273 aa15.31■□□□□ 0.04
VPS26B-203ENST00000525918 AXIN2Q9Y2T1 843 aa15.31■□□□□ 0.04
VPS26B-203ENST00000525918 WDR17Q8IZU2 1322 aa15.31■□□□□ 0.04
VPS26B-203ENST00000525918 ROCK2O75116 1388 aaKnown RBP15.31■□□□□ 0.04
VPS26B-203ENST00000525918 PLSCR1O15162 318 aa15.3■□□□□ 0.04
VPS26B-203ENST00000525918 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
VPS26B-203ENST00000525918 ARHGEF25Q86VW2 580 aa15.3■□□□□ 0.04
VPS26B-203ENST00000525918 TTC21AQ8NDW8 1320 aa15.3■□□□□ 0.04
VPS26B-203ENST00000525918 CDCA7Q9BWT1 371 aaPredicted RBP15.3■□□□□ 0.04
VPS26B-203ENST00000525918 CPSF1Q10570 1443 aaKnown RBP15.29■□□□□ 0.04
VPS26B-203ENST00000525918 NEUROD1Q13562 356 aa15.29■□□□□ 0.04
VPS26B-203ENST00000525918 BCL11BQ9C0K0 894 aaPredicted RBP15.28■□□□□ 0.04
VPS26B-203ENST00000525918 SPON1Q9HCB6 807 aa15.27■□□□□ 0.04
VPS26B-203ENST00000525918 MON2Q7Z3U7 1717 aa15.26■□□□□ 0.03
VPS26B-203ENST00000525918 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
VPS26B-203ENST00000525918 CARD10Q9BWT7 1032 aa15.26■□□□□ 0.03
VPS26B-203ENST00000525918 BCL9O00512 1426 aa15.26■□□□□ 0.03
VPS26B-203ENST00000525918 SOX12O15370 315 aa15.25■□□□□ 0.03
VPS26B-203ENST00000525918 KCNQ2O43526 872 aa15.25■□□□□ 0.03
VPS26B-203ENST00000525918 CSB-PGBD3P0DP91 1061 aa15.25■□□□□ 0.03
VPS26B-203ENST00000525918 MARCH10Q8NA82 808 aaPredicted RBP15.25■□□□□ 0.03
VPS26B-203ENST00000525918 NFAT5O94916 1531 aa15.24■□□□□ 0.03
VPS26B-203ENST00000525918 ABCC6O95255 1503 aa15.24■□□□□ 0.03
VPS26B-203ENST00000525918 EXOC5O00471 708 aa15.24■□□□□ 0.03
VPS26B-203ENST00000525918 SBNO2Q9Y2G9 1366 aa15.24■□□□□ 0.03
VPS26B-203ENST00000525918 USP54Q70EL1 1684 aa15.23■□□□□ 0.03
VPS26B-203ENST00000525918 PTF1AQ7RTS3 328 aa15.23■□□□□ 0.03
VPS26B-203ENST00000525918 PPP1R1BQ9UD71 204 aaPredicted RBP15.23■□□□□ 0.03
VPS26B-203ENST00000525918 LTN1O94822 1766 aa15.23■□□□□ 0.03
VPS26B-203ENST00000525918 CCDC7Q96M83 1385 aa15.23■□□□□ 0.03
VPS26B-203ENST00000525918 CASZ1Q86V15 1759 aa15.21■□□□□ 0.03
VPS26B-203ENST00000525918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.03
VPS26B-203ENST00000525918 PROM2Q8N271 834 aa15.21■□□□□ 0.03
VPS26B-203ENST00000525918 USP31Q70CQ4 1352 aa15.21■□□□□ 0.02
VPS26B-203ENST00000525918 ANO8Q9HCE9 1232 aaPredicted RBP15.2■□□□□ 0.02
VPS26B-203ENST00000525918 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
VPS26B-203ENST00000525918 CARD11Q9BXL7 1154 aa15.19■□□□□ 0.02
VPS26B-203ENST00000525918 NINLQ9Y2I6 1382 aa15.19■□□□□ 0.02
VPS26B-203ENST00000525918 CD163L1Q9NR16 1453 aa15.19■□□□□ 0.02
VPS26B-203ENST00000525918 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
VPS26B-203ENST00000525918 TMC1Q8TDI8 760 aa15.18■□□□□ 0.02
VPS26B-203ENST00000525918 TNS2Q63HR2 1409 aa15.17■□□□□ 0.02
VPS26B-203ENST00000525918 KAT6BQ8WYB5 2073 aa15.17■□□□□ 0.02
VPS26B-203ENST00000525918 NHSQ6T4R5 1651 aa15.17■□□□□ 0.02
VPS26B-203ENST00000525918 TXNRD1Q16881 649 aa15.17■□□□□ 0.02
VPS26B-203ENST00000525918 NME9Q86XW9 330 aa15.17■□□□□ 0.02
VPS26B-203ENST00000525918 ERBB3P21860 1342 aa15.17■□□□□ 0.02
VPS26B-203ENST00000525918 YY1P25490 414 aa15.16■□□□□ 0.02
VPS26B-203ENST00000525918 NLRP2Q9NX02 1062 aa15.16■□□□□ 0.02
VPS26B-203ENST00000525918 STK32BQ9NY57 414 aa15.16■□□□□ 0.02
VPS26B-203ENST00000525918 SLC15A2Q16348 729 aa15.15■□□□□ 0.02
VPS26B-203ENST00000525918 PUS7Q96PZ0 661 aaKnown RBP15.15■□□□□ 0.02
VPS26B-203ENST00000525918 PDGFDQ9GZP0 370 aaPredicted RBP15.15■□□□□ 0.02
VPS26B-203ENST00000525918 SLC12A5Q9H2X9 1139 aa15.15■□□□□ 0.02
VPS26B-203ENST00000525918 TERF2IPQ9NYB0 399 aa15.15■□□□□ 0.02
VPS26B-203ENST00000525918 EDC4Q6P2E9 1401 aaKnown RBP15.15■□□□□ 0.02
VPS26B-203ENST00000525918 IL2RBP14784 551 aa15.14■□□□□ 0.01
VPS26B-203ENST00000525918 BTAF1O14981 1849 aa15.13■□□□□ 0.01
VPS26B-203ENST00000525918 ZBTB7AO95365 584 aa15.13■□□□□ 0.01
VPS26B-203ENST00000525918 ANKRD24Q8TF21 1146 aa15.13■□□□□ 0.01
VPS26B-203ENST00000525918 MYOM1P52179 1685 aa15.12■□□□□ 0.01
VPS26B-203ENST00000525918 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
VPS26B-203ENST00000525918 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
VPS26B-203ENST00000525918 PTGER2P43116 358 aa15.12■□□□□ 0.01
VPS26B-203ENST00000525918 ACSBG1Q96GR2 724 aa15.12■□□□□ 0.01
VPS26B-203ENST00000525918 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
VPS26B-203ENST00000525918 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
VPS26B-203ENST00000525918 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
VPS26B-203ENST00000525918 IP6K1Q92551 441 aa15.09■□□□□ 0.01
VPS26B-203ENST00000525918 MTFR1LQ9H019 292 aa15.09■□□□□ 0.01
VPS26B-203ENST00000525918 PAPPAQ13219 1627 aa15.08■□□□□ 0
VPS26B-203ENST00000525918 COG3Q96JB2 828 aa15.06■□□□□ 0
VPS26B-203ENST00000525918 TESK2Q96S53 571 aa15.06■□□□□ 0
VPS26B-203ENST00000525918 SYT17Q9BSW7 474 aa15.06■□□□□ 0
VPS26B-203ENST00000525918 RGPD2P0DJD1 1756 aa15.06■□□□□ 0
VPS26B-203ENST00000525918 ST20-MTHFSA0A0A6YYL1 179 aa15.05■□□□□ -0
VPS26B-203ENST00000525918 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ -0
VPS26B-203ENST00000525918 LTV1Q96GA3 475 aaPredicted RBP15.05■□□□□ -0
VPS26B-203ENST00000525918 SGIP1Q9BQI5 828 aa15.05■□□□□ -0
VPS26B-203ENST00000525918 FHDC1Q9C0D6 1143 aaPredicted RBP15.05■□□□□ -0
VPS26B-203ENST00000525918 QSER1Q2KHR3 1735 aa15.05■□□□□ -0
VPS26B-203ENST00000525918 CHD4Q14839 1912 aa15.05■□□□□ -0
VPS26B-203ENST00000525918 LRRC4BQ9NT99 713 aa15.04■□□□□ -0
VPS26B-203ENST00000525918 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
VPS26B-203ENST00000525918 AMPHP49418 695 aa15.03■□□□□ -0
VPS26B-203ENST00000525918 SLC27A3Q5K4L6 730 aa15.03■□□□□ -0
VPS26B-203ENST00000525918 UTRNP46939 3433 aa15.02■□□□□ -0
VPS26B-203ENST00000525918 HOXC9P31274 260 aa15.02■□□□□ -0
VPS26B-203ENST00000525918 ZNF827Q17R98 1081 aa15.02■□□□□ -0
VPS26B-203ENST00000525918 ARXQ96QS3 562 aa15.02■□□□□ -0
VPS26B-203ENST00000525918 SHANK3Q9BYB0 1731 aa15.02□□□□□ -0.01
VPS26B-203ENST00000525918 LY75O60449 1722 aa15.01□□□□□ -0.01
VPS26B-203ENST00000525918 DOT1LQ8TEK3 1739 aa15.01□□□□□ -0.01
VPS26B-203ENST00000525918 FBLN1P23142 703 aa15.01□□□□□ -0.01
VPS26B-203ENST00000525918 SLC16A10Q8TF71 515 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms