RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 NR6A1Q15406 480 aa9.36□□□□□ -0.91
SVIP-202ENST00000525670 MRPL14Q6P1L8 145 aaKnown RBP9.36□□□□□ -0.91
SVIP-202ENST00000525670 ZFP42Q96MM3 310 aa9.36□□□□□ -0.91
SVIP-202ENST00000525670 ZIC2O95409 532 aaPredicted RBP9.35□□□□□ -0.91
SVIP-202ENST00000525670 SCARF1Q14162 830 aa9.35□□□□□ -0.91
SVIP-202ENST00000525670 VASH1Q7L8A9 365 aaPredicted RBP9.35□□□□□ -0.91
SVIP-202ENST00000525670 NESP48681 1621 aa9.34□□□□□ -0.91
SVIP-202ENST00000525670 ZC3H4Q9UPT8 1303 aaKnown RBP9.34□□□□□ -0.91
SVIP-202ENST00000525670 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
SVIP-202ENST00000525670 ITPKCQ96DU7 683 aa9.34□□□□□ -0.91
SVIP-202ENST00000525670 ARHGAP9Q9BRR9 750 aa9.34□□□□□ -0.91
SVIP-202ENST00000525670 CARD14Q9BXL6 1004 aa9.34□□□□□ -0.91
SVIP-202ENST00000525670 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
SVIP-202ENST00000525670 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
SVIP-202ENST00000525670 ZFAND3Q9H8U3 227 aa9.33□□□□□ -0.92
SVIP-202ENST00000525670 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
SVIP-202ENST00000525670 FSHRP23945 695 aa9.32□□□□□ -0.92
SVIP-202ENST00000525670 RFC5P40937 340 aa9.32□□□□□ -0.92
SVIP-202ENST00000525670 ZBTB33Q86T24 672 aa9.31□□□□□ -0.92
SVIP-202ENST00000525670 IL27Q8NEV9 243 aa9.31□□□□□ -0.92
SVIP-202ENST00000525670 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
SVIP-202ENST00000525670 NXF1Q9UBU9 619 aaKnown RBP9.31□□□□□ -0.92
SVIP-202ENST00000525670 GPSM3Q9Y4H4 160 aa9.31□□□□□ -0.92
SVIP-202ENST00000525670 USP17L8P0C7I0 530 aa9.3□□□□□ -0.92
SVIP-202ENST00000525670 PTK2Q05397 1052 aa9.3□□□□□ -0.92
SVIP-202ENST00000525670 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
SVIP-202ENST00000525670 CDV3Q9UKY7 258 aaKnown RBP9.3□□□□□ -0.92
SVIP-202ENST00000525670 EMILIN1Q9Y6C2 1016 aa9.3□□□□□ -0.92
SVIP-202ENST00000525670 SUPT5HO00267 1087 aaKnown RBP9.29□□□□□ -0.92
SVIP-202ENST00000525670 TMEM259Q4ZIN3 620 aa9.29□□□□□ -0.92
SVIP-202ENST00000525670 NPAS3Q8IXF0 933 aa9.29□□□□□ -0.92
SVIP-202ENST00000525670 CCDC116Q8IYX3 515 aa9.29□□□□□ -0.92
SVIP-202ENST00000525670 EPS8L1Q8TE68 723 aa9.29□□□□□ -0.92
SVIP-202ENST00000525670 SLC16A10Q8TF71 515 aa9.29□□□□□ -0.92
SVIP-202ENST00000525670 HMX1Q9NP08 348 aaPredicted RBP9.29□□□□□ -0.92
SVIP-202ENST00000525670 ERCC6Q03468 1493 aa9.28□□□□□ -0.92
SVIP-202ENST00000525670 SLC10A4Q96EP9 437 aa9.28□□□□□ -0.92
SVIP-202ENST00000525670 WIPF1O43516 503 aa9.27□□□□□ -0.93
SVIP-202ENST00000525670 UPP2O95045 317 aa9.27□□□□□ -0.93
SVIP-202ENST00000525670 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.93
SVIP-202ENST00000525670 MEIOBQ8N635 442 aa9.27□□□□□ -0.93
SVIP-202ENST00000525670 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
SVIP-202ENST00000525670 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
SVIP-202ENST00000525670 C6orf118Q5T5N4 469 aa9.26□□□□□ -0.93
SVIP-202ENST00000525670 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
SVIP-202ENST00000525670 KIF21AQ7Z4S6 1674 aa9.26□□□□□ -0.93
SVIP-202ENST00000525670 BMP2P12643 396 aa9.25□□□□□ -0.93
SVIP-202ENST00000525670 PPP1R26Q5T8A7 1209 aaPredicted RBP9.25□□□□□ -0.93
SVIP-202ENST00000525670 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
SVIP-202ENST00000525670 ADAM32Q8TC27 787 aa9.25□□□□□ -0.93
SVIP-202ENST00000525670 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
SVIP-202ENST00000525670 DHX9Q08211 1270 aaKnown RBP9.24□□□□□ -0.93
SVIP-202ENST00000525670 TSEN34Q9BSV6 310 aaKnown RBP9.24□□□□□ -0.93
SVIP-202ENST00000525670 SOBPA7XYQ1 873 aa9.22□□□□□ -0.93
SVIP-202ENST00000525670 H3BM21 787 aa9.22□□□□□ -0.93
SVIP-202ENST00000525670 MAN1A2O60476 641 aa9.22□□□□□ -0.93
SVIP-202ENST00000525670 INSM1Q01101 510 aaPredicted RBP9.22□□□□□ -0.93
SVIP-202ENST00000525670 Q6ZVU0 165 aa9.22□□□□□ -0.93
SVIP-202ENST00000525670 IRF7Q92985 503 aa9.22□□□□□ -0.93
SVIP-202ENST00000525670 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
SVIP-202ENST00000525670 LAMC3Q9Y6N6 1575 aa9.21□□□□□ -0.93
SVIP-202ENST00000525670 VEGFBP49765 207 aa9.21□□□□□ -0.94
SVIP-202ENST00000525670 TPRNQ4KMQ1 711 aa9.21□□□□□ -0.94
SVIP-202ENST00000525670 CCDC88BA6NC98 1476 aa9.21□□□□□ -0.94
SVIP-202ENST00000525670 NBPF20Q3BBV1 942 aa9.2□□□□□ -0.94
SVIP-202ENST00000525670 INTS6LQ5JSJ4 861 aaKnown RBP9.2□□□□□ -0.94
SVIP-202ENST00000525670 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
SVIP-202ENST00000525670 SOS2Q07890 1332 aaPredicted RBP9.2□□□□□ -0.94
SVIP-202ENST00000525670 CBLBQ13191 982 aa9.19□□□□□ -0.94
SVIP-202ENST00000525670 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
SVIP-202ENST00000525670 THOC2Q8NI27 1593 aaKnown RBP9.17□□□□□ -0.94
SVIP-202ENST00000525670 CADPSQ9ULU8 1353 aa9.17□□□□□ -0.94
SVIP-202ENST00000525670 GMPRP36959 345 aa9.17□□□□□ -0.94
SVIP-202ENST00000525670 BANK1Q8NDB2 785 aa9.17□□□□□ -0.94
SVIP-202ENST00000525670 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
SVIP-202ENST00000525670 DNMT3LQ9UJW3 386 aa9.16□□□□□ -0.94
SVIP-202ENST00000525670 PRDM2Q13029 1718 aa9.16□□□□□ -0.94
SVIP-202ENST00000525670 ERBB4Q15303 1308 aa9.15□□□□□ -0.94
SVIP-202ENST00000525670 ZBBXA8MT70 800 aa9.15□□□□□ -0.94
SVIP-202ENST00000525670 ESPNB1AK53 854 aa9.15□□□□□ -0.94
SVIP-202ENST00000525670 SPINT1O43278 529 aa9.15□□□□□ -0.94
SVIP-202ENST00000525670 STK17AQ9UEE5 414 aa9.15□□□□□ -0.94
SVIP-202ENST00000525670 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.95
SVIP-202ENST00000525670 SEPT12Q8IYM1 358 aa9.14□□□□□ -0.95
SVIP-202ENST00000525670 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
SVIP-202ENST00000525670 SOCS7O14512 581 aa9.13□□□□□ -0.95
SVIP-202ENST00000525670 RAB15P59190 212 aa9.13□□□□□ -0.95
SVIP-202ENST00000525670 TMPRSS4Q9NRS4 437 aa9.13□□□□□ -0.95
SVIP-202ENST00000525670 CFTRP13569 1480 aa9.13□□□□□ -0.95
SVIP-202ENST00000525670 FANCD2Q9BXW9 1451 aa9.13□□□□□ -0.95
SVIP-202ENST00000525670 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
SVIP-202ENST00000525670 PDS5BQ9NTI5 1447 aa9.13□□□□□ -0.95
SVIP-202ENST00000525670 PPFIA3O75145 1194 aa9.12□□□□□ -0.95
SVIP-202ENST00000525670 VSIG8P0DPA2 414 aa9.12□□□□□ -0.95
SVIP-202ENST00000525670 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
SVIP-202ENST00000525670 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
SVIP-202ENST00000525670 AGBL1Q96MI9 1066 aa9.12□□□□□ -0.95
SVIP-202ENST00000525670 FIGNL2A6NMB9 653 aa9.11□□□□□ -0.95
SVIP-202ENST00000525670 LILRA1O75019 489 aa9.11□□□□□ -0.95
SVIP-202ENST00000525670 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms