RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 POLR3GLQ9BT43 218 aa17.92■□□□□ 0.46
TRAPPC4-205ENST00000525079 ANKRD36BQ8N2N9 1353 aa17.91■□□□□ 0.46
TRAPPC4-205ENST00000525079 USP54Q70EL1 1684 aa17.91■□□□□ 0.46
TRAPPC4-205ENST00000525079 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
TRAPPC4-205ENST00000525079 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
TRAPPC4-205ENST00000525079 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
TRAPPC4-205ENST00000525079 CRB1P82279 1406 aa17.9■□□□□ 0.46
TRAPPC4-205ENST00000525079 CSB-PGBD3P0DP91 1061 aa17.9■□□□□ 0.46
TRAPPC4-205ENST00000525079 CCDC125Q86Z20 511 aa17.9■□□□□ 0.46
TRAPPC4-205ENST00000525079 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.45
TRAPPC4-205ENST00000525079 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-205ENST00000525079 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.45
TRAPPC4-205ENST00000525079 FBLN1P23142 703 aa17.88■□□□□ 0.45
TRAPPC4-205ENST00000525079 COG3Q96JB2 828 aa17.88■□□□□ 0.45
TRAPPC4-205ENST00000525079 THRAP3Q9Y2W1 955 aaKnown RBP17.88■□□□□ 0.45
TRAPPC4-205ENST00000525079 WDR17Q8IZU2 1322 aa17.88■□□□□ 0.45
TRAPPC4-205ENST00000525079 LTN1O94822 1766 aa17.88■□□□□ 0.45
TRAPPC4-205ENST00000525079 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
TRAPPC4-205ENST00000525079 SF3B2Q13435 895 aaKnown RBP17.87■□□□□ 0.45
TRAPPC4-205ENST00000525079 DEFB132Q7Z7B7 95 aa17.87■□□□□ 0.45
TRAPPC4-205ENST00000525079 MYOM1P52179 1685 aa17.87■□□□□ 0.45
TRAPPC4-205ENST00000525079 GGNBP2Q9H3C7 697 aa17.86■□□□□ 0.45
TRAPPC4-205ENST00000525079 FYB1O15117 783 aa17.85■□□□□ 0.45
TRAPPC4-205ENST00000525079 CARD14Q9BXL6 1004 aa17.85■□□□□ 0.45
TRAPPC4-205ENST00000525079 EP400Q96L91 3159 aa17.84■□□□□ 0.45
TRAPPC4-205ENST00000525079 CARD10Q9BWT7 1032 aa17.83■□□□□ 0.44
TRAPPC4-205ENST00000525079 FAM196AQ6ZSG2 479 aa17.82■□□□□ 0.44
TRAPPC4-205ENST00000525079 ANKRD24Q8TF21 1146 aa17.82■□□□□ 0.44
TRAPPC4-205ENST00000525079 LTV1Q96GA3 475 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC4-205ENST00000525079 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
TRAPPC4-205ENST00000525079 ABCC6O95255 1503 aa17.82■□□□□ 0.44
TRAPPC4-205ENST00000525079 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
TRAPPC4-205ENST00000525079 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
TRAPPC4-205ENST00000525079 TRIM37O94972 964 aa17.81■□□□□ 0.44
TRAPPC4-205ENST00000525079 KIF20BQ96Q89 1820 aa17.81■□□□□ 0.44
TRAPPC4-205ENST00000525079 ERBB3P21860 1342 aa17.8■□□□□ 0.44
TRAPPC4-205ENST00000525079 MAP3K19Q56UN5 1328 aa17.8■□□□□ 0.44
TRAPPC4-205ENST00000525079 C11orf95C9JLR9 678 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC4-205ENST00000525079 AMPHP49418 695 aa17.8■□□□□ 0.44
TRAPPC4-205ENST00000525079 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
TRAPPC4-205ENST00000525079 DDB1Q16531 1140 aa17.8■□□□□ 0.44
TRAPPC4-205ENST00000525079 IP6K1Q92551 441 aa17.8■□□□□ 0.44
TRAPPC4-205ENST00000525079 WNK3Q9BYP7 1800 aa17.79■□□□□ 0.44
TRAPPC4-205ENST00000525079 LRRC37A3O60309 1634 aa17.79■□□□□ 0.44
TRAPPC4-205ENST00000525079 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
TRAPPC4-205ENST00000525079 BAG6P46379 1132 aa17.78■□□□□ 0.44
TRAPPC4-205ENST00000525079 EN1Q05925 392 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-205ENST00000525079 HOXC9P31274 260 aa17.77■□□□□ 0.44
TRAPPC4-205ENST00000525079 CCDC7Q96M83 1385 aa17.77■□□□□ 0.43
TRAPPC4-205ENST00000525079 DISP2A7MBM2 1401 aa17.76■□□□□ 0.43
TRAPPC4-205ENST00000525079 CDCA7Q9BWT1 371 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC4-205ENST00000525079 TNS1Q9HBL0 1735 aaKnown RBP17.75■□□□□ 0.43
TRAPPC4-205ENST00000525079 EXOC5O00471 708 aa17.75■□□□□ 0.43
TRAPPC4-205ENST00000525079 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-205ENST00000525079 PANK3Q9H999 370 aa17.75■□□□□ 0.43
TRAPPC4-205ENST00000525079 APBA3O96018 575 aa17.74■□□□□ 0.43
TRAPPC4-205ENST00000525079 EZH2Q15910 746 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-205ENST00000525079 CGNL1Q0VF96 1302 aa17.72■□□□□ 0.43
TRAPPC4-205ENST00000525079 OVOS2A0A0G2JMS6 1433 aa17.72■□□□□ 0.43
TRAPPC4-205ENST00000525079 PEAK1Q9H792 1746 aa17.72■□□□□ 0.43
TRAPPC4-205ENST00000525079 RGPD2P0DJD1 1756 aa17.72■□□□□ 0.43
TRAPPC4-205ENST00000525079 IL2RBP14784 551 aa17.72■□□□□ 0.43
TRAPPC4-205ENST00000525079 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
TRAPPC4-205ENST00000525079 RTL1A6NKG5 1358 aa17.7■□□□□ 0.42
TRAPPC4-205ENST00000525079 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC4-205ENST00000525079 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
TRAPPC4-205ENST00000525079 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
TRAPPC4-205ENST00000525079 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
TRAPPC4-205ENST00000525079 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC4-205ENST00000525079 CAMKK2Q96RR4 588 aa17.69■□□□□ 0.42
TRAPPC4-205ENST00000525079 KIF7Q2M1P5 1343 aa17.69■□□□□ 0.42
TRAPPC4-205ENST00000525079 SBF2Q86WG5 1849 aa17.68■□□□□ 0.42
TRAPPC4-205ENST00000525079 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
TRAPPC4-205ENST00000525079 TNS2Q63HR2 1409 aa17.68■□□□□ 0.42
TRAPPC4-205ENST00000525079 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
TRAPPC4-205ENST00000525079 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
TRAPPC4-205ENST00000525079 FLT4P35916 1363 aa17.66■□□□□ 0.42
TRAPPC4-205ENST00000525079 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-205ENST00000525079 INSRP06213 1382 aa17.66■□□□□ 0.42
TRAPPC4-205ENST00000525079 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
TRAPPC4-205ENST00000525079 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
TRAPPC4-205ENST00000525079 DDX54Q8TDD1 881 aaKnown RBP17.65■□□□□ 0.42
TRAPPC4-205ENST00000525079 ACSBG1Q96GR2 724 aa17.65■□□□□ 0.42
TRAPPC4-205ENST00000525079 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
TRAPPC4-205ENST00000525079 KCNQ2O43526 872 aa17.64■□□□□ 0.41
TRAPPC4-205ENST00000525079 BCL11BQ9C0K0 894 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC4-205ENST00000525079 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
TRAPPC4-205ENST00000525079 KNSTRNQ9Y448 316 aa17.63■□□□□ 0.41
TRAPPC4-205ENST00000525079 KIF24Q5T7B8 1368 aa17.63■□□□□ 0.41
TRAPPC4-205ENST00000525079 BCL9O00512 1426 aa17.62■□□□□ 0.41
TRAPPC4-205ENST00000525079 MEGF6O75095 1541 aa17.62■□□□□ 0.41
TRAPPC4-205ENST00000525079 R3HDM1Q15032 1099 aaKnown RBP17.61■□□□□ 0.41
TRAPPC4-205ENST00000525079 MORC1Q86VD1 984 aa17.61■□□□□ 0.41
TRAPPC4-205ENST00000525079 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-205ENST00000525079 WASHC2AQ641Q2 1341 aa17.6■□□□□ 0.41
TRAPPC4-205ENST00000525079 PARD3Q8TEW0 1356 aa17.6■□□□□ 0.41
TRAPPC4-205ENST00000525079 RREB1Q92766 1687 aa17.6■□□□□ 0.41
TRAPPC4-205ENST00000525079 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
TRAPPC4-205ENST00000525079 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.41
TRAPPC4-205ENST00000525079 NSD2O96028 1365 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms