RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 SPATA31A7Q8IWB4 1347 aa20.8■□□□□ 0.92
SF3B2-202ENST00000524475 GGNBP2Q9H3C7 697 aa20.8■□□□□ 0.92
SF3B2-202ENST00000524475 ONECUT3O60422 494 aaPredicted RBP20.79■□□□□ 0.92
SF3B2-202ENST00000524475 RGPD5Q99666 1765 aa20.78■□□□□ 0.92
SF3B2-202ENST00000524475 RTL1A6NKG5 1358 aa20.78■□□□□ 0.92
SF3B2-202ENST00000524475 KIF24Q5T7B8 1368 aa20.78■□□□□ 0.92
SF3B2-202ENST00000524475 SOX12O15370 315 aa20.78■□□□□ 0.92
SF3B2-202ENST00000524475 BLMP54132 1417 aaPredicted RBP20.78■□□□□ 0.92
SF3B2-202ENST00000524475 AXIN2Q9Y2T1 843 aa20.77■□□□□ 0.92
SF3B2-202ENST00000524475 SPATA31A1Q5TZJ5 1347 aa20.77■□□□□ 0.91
SF3B2-202ENST00000524475 EVA1CP58658 441 aa20.76■□□□□ 0.91
SF3B2-202ENST00000524475 CRB1P82279 1406 aa20.76■□□□□ 0.91
SF3B2-202ENST00000524475 WDR17Q8IZU2 1322 aa20.76■□□□□ 0.91
SF3B2-202ENST00000524475 THSD7AQ9UPZ6 1657 aa20.75■□□□□ 0.91
SF3B2-202ENST00000524475 STRN4Q9NRL3 753 aa20.75■□□□□ 0.91
SF3B2-202ENST00000524475 KNSTRNQ9Y448 316 aa20.75■□□□□ 0.91
SF3B2-202ENST00000524475 PER1O15534 1290 aaPredicted RBP20.74■□□□□ 0.91
SF3B2-202ENST00000524475 IP6K1Q92551 441 aa20.74■□□□□ 0.91
SF3B2-202ENST00000524475 THRAP3Q9Y2W1 955 aaKnown RBP20.74■□□□□ 0.91
SF3B2-202ENST00000524475 CCDC9Q9Y3X0 531 aaKnown RBP20.74■□□□□ 0.91
SF3B2-202ENST00000524475 MAP3K19Q56UN5 1328 aa20.74■□□□□ 0.91
SF3B2-202ENST00000524475 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
SF3B2-202ENST00000524475 NPC1L1Q9UHC9 1359 aa20.73■□□□□ 0.91
SF3B2-202ENST00000524475 ZBTB7CA1YPR0 619 aa20.73■□□□□ 0.91
SF3B2-202ENST00000524475 SOCS7O14512 581 aa20.73■□□□□ 0.91
SF3B2-202ENST00000524475 LARP1Q6PKG0 1096 aaKnown RBP20.73■□□□□ 0.91
SF3B2-202ENST00000524475 ERBB3P21860 1342 aa20.73■□□□□ 0.91
SF3B2-202ENST00000524475 AMER1Q5JTC6 1135 aaPredicted RBP20.72■□□□□ 0.91
SF3B2-202ENST00000524475 BARGINQ6ZT62 677 aa20.72■□□□□ 0.91
SF3B2-202ENST00000524475 TCP11L2Q8N4U5 519 aa20.7■□□□□ 0.9
SF3B2-202ENST00000524475 MAP2P11137 1827 aaKnown RBP20.69■□□□□ 0.9
SF3B2-202ENST00000524475 HOXC9P31274 260 aa20.69■□□□□ 0.9
SF3B2-202ENST00000524475 CARD10Q9BWT7 1032 aa20.69■□□□□ 0.9
SF3B2-202ENST00000524475 PEAK1Q9H792 1746 aa20.69■□□□□ 0.9
SF3B2-202ENST00000524475 FLT4P35916 1363 aa20.69■□□□□ 0.9
SF3B2-202ENST00000524475 BRWD3Q6RI45 1802 aa20.69■□□□□ 0.9
SF3B2-202ENST00000524475 WNK3Q9BYP7 1800 aa20.69■□□□□ 0.9
SF3B2-202ENST00000524475 EP400Q96L91 3159 aa20.69■□□□□ 0.9
SF3B2-202ENST00000524475 AMPHP49418 695 aa20.68■□□□□ 0.9
SF3B2-202ENST00000524475 RRS1Q15050 365 aaKnown RBP20.68■□□□□ 0.9
SF3B2-202ENST00000524475 FAM98CQ17RN3 349 aaKnown RBP20.68■□□□□ 0.9
SF3B2-202ENST00000524475 SEPT12Q8IYM1 358 aa20.68■□□□□ 0.9
SF3B2-202ENST00000524475 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
SF3B2-202ENST00000524475 PARP4Q9UKK3 1724 aaKnown RBP20.67■□□□□ 0.9
SF3B2-202ENST00000524475 FBLN1P23142 703 aa20.67■□□□□ 0.9
SF3B2-202ENST00000524475 TOM1L2Q6ZVM7 507 aa20.67■□□□□ 0.9
SF3B2-202ENST00000524475 INSRP06213 1382 aa20.67■□□□□ 0.9
SF3B2-202ENST00000524475 ANKRD24Q8TF21 1146 aa20.66■□□□□ 0.9
SF3B2-202ENST00000524475 CSB-PGBD3P0DP91 1061 aa20.64■□□□□ 0.89
SF3B2-202ENST00000524475 DISP2A7MBM2 1401 aa20.63■□□□□ 0.89
SF3B2-202ENST00000524475 MORC1Q86VD1 984 aa20.63■□□□□ 0.89
SF3B2-202ENST00000524475 CDCA7Q9BWT1 371 aaPredicted RBP20.63■□□□□ 0.89
SF3B2-202ENST00000524475 USP35Q9P2H5 1018 aa20.63■□□□□ 0.89
SF3B2-202ENST00000524475 POLKQ9UBT6 870 aa20.63■□□□□ 0.89
SF3B2-202ENST00000524475 EMILIN1Q9Y6C2 1016 aa20.63■□□□□ 0.89
SF3B2-202ENST00000524475 LRRC37A3O60309 1634 aa20.6■□□□□ 0.89
SF3B2-202ENST00000524475 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
SF3B2-202ENST00000524475 KRT27Q7Z3Y8 459 aa20.59■□□□□ 0.89
SF3B2-202ENST00000524475 NLRP2Q9NX02 1062 aa20.59■□□□□ 0.89
SF3B2-202ENST00000524475 A0A0G2JS52 829 aa20.58■□□□□ 0.89
SF3B2-202ENST00000524475 MYT1Q01538 1121 aa20.58■□□□□ 0.89
SF3B2-202ENST00000524475 NCAPD2Q15021 1401 aa20.58■□□□□ 0.88
SF3B2-202ENST00000524475 RGPD2P0DJD1 1756 aa20.57■□□□□ 0.88
SF3B2-202ENST00000524475 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
SF3B2-202ENST00000524475 LTV1Q96GA3 475 aaPredicted RBP20.55■□□□□ 0.88
SF3B2-202ENST00000524475 TNS2Q63HR2 1409 aa20.54■□□□□ 0.88
SF3B2-202ENST00000524475 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
SF3B2-202ENST00000524475 UPF1Q92900 1129 aaKnown RBP eCLIP20.54■□□□□ 0.88
SF3B2-202ENST00000524475 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
SF3B2-202ENST00000524475 IL2RBP14784 551 aa20.53■□□□□ 0.88
SF3B2-202ENST00000524475 DDB1Q16531 1140 aa20.53■□□□□ 0.88
SF3B2-202ENST00000524475 PLEKHG2Q9H7P9 1386 aa20.52■□□□□ 0.88
SF3B2-202ENST00000524475 PDE3BQ13370 1112 aa20.52■□□□□ 0.88
SF3B2-202ENST00000524475 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.88
SF3B2-202ENST00000524475 NBPF4Q96M43 638 aa20.52■□□□□ 0.88
SF3B2-202ENST00000524475 BCL9O00512 1426 aa20.52■□□□□ 0.87
SF3B2-202ENST00000524475 CCDC125Q86Z20 511 aa20.51■□□□□ 0.87
SF3B2-202ENST00000524475 OVOS2A0A0G2JMS6 1433 aa20.5■□□□□ 0.87
SF3B2-202ENST00000524475 EIF4A2Q14240 407 aaKnown RBP20.49■□□□□ 0.87
SF3B2-202ENST00000524475 FAM196AQ6ZSG2 479 aa20.49■□□□□ 0.87
SF3B2-202ENST00000524475 EXOC5O00471 708 aa20.48■□□□□ 0.87
SF3B2-202ENST00000524475 MEGF6O75095 1541 aa20.48■□□□□ 0.87
SF3B2-202ENST00000524475 PARD3Q8TEW0 1356 aa20.47■□□□□ 0.87
SF3B2-202ENST00000524475 RGPD1P0DJD0 1748 aa20.47■□□□□ 0.87
SF3B2-202ENST00000524475 MTHFSP49914 203 aa20.47■□□□□ 0.87
SF3B2-202ENST00000524475 IGSF1Q8N6C5 1336 aa20.47■□□□□ 0.87
SF3B2-202ENST00000524475 DDX10Q13206 875 aaKnown RBP20.46■□□□□ 0.87
SF3B2-202ENST00000524475 EYA1Q99502 592 aa20.46■□□□□ 0.87
SF3B2-202ENST00000524475 SHANK3Q9BYB0 1731 aa20.45■□□□□ 0.86
SF3B2-202ENST00000524475 PKD1L3Q7Z443 1732 aa20.44■□□□□ 0.86
SF3B2-202ENST00000524475 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
SF3B2-202ENST00000524475 SBF2Q86WG5 1849 aa20.44■□□□□ 0.86
SF3B2-202ENST00000524475 MARCH10Q8NA82 808 aaPredicted RBP20.44■□□□□ 0.86
SF3B2-202ENST00000524475 RAPGEF4Q8WZA2 1011 aa20.44■□□□□ 0.86
SF3B2-202ENST00000524475 TNS1Q9HBL0 1735 aaKnown RBP20.44■□□□□ 0.86
SF3B2-202ENST00000524475 ZNF316A6NFI3 1004 aaPredicted RBP20.43■□□□□ 0.86
SF3B2-202ENST00000524475 IL13P35225 146 aa20.43■□□□□ 0.86
SF3B2-202ENST00000524475 USHBP1Q8N6Y0 703 aa20.43■□□□□ 0.86
SF3B2-202ENST00000524475 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
SF3B2-202ENST00000524475 KDRP35968 1356 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms