RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 MRPL14Q6P1L8 145 aaKnown RBP7.75□□□□□ -1.17
PCM1-220ENST00000523896 TRIM46Q7Z4K8 759 aa7.75□□□□□ -1.17
PCM1-220ENST00000523896 CCDC116Q8IYX3 515 aa7.75□□□□□ -1.17
PCM1-220ENST00000523896 EMILIN1Q9Y6C2 1016 aa7.75□□□□□ -1.17
PCM1-220ENST00000523896 GRM5P41594 1212 aa7.74□□□□□ -1.17
PCM1-220ENST00000523896 DHX9Q08211 1270 aaKnown RBP7.74□□□□□ -1.17
PCM1-220ENST00000523896 ITPKCQ96DU7 683 aa7.74□□□□□ -1.17
PCM1-220ENST00000523896 ZMYND15Q9H091 742 aa7.74□□□□□ -1.17
PCM1-220ENST00000523896 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
PCM1-220ENST00000523896 WFS1O76024 890 aa7.73□□□□□ -1.17
PCM1-220ENST00000523896 NR3C2P08235 984 aa7.73□□□□□ -1.17
PCM1-220ENST00000523896 NBPF20Q3BBV1 942 aa7.73□□□□□ -1.17
PCM1-220ENST00000523896 TRIM52Q96A61 297 aa7.73□□□□□ -1.17
PCM1-220ENST00000523896 ZFP42Q96MM3 310 aa7.73□□□□□ -1.17
PCM1-220ENST00000523896 PURBQ96QR8 312 aaKnown RBP7.73□□□□□ -1.17
PCM1-220ENST00000523896 HMX1Q9NP08 348 aaPredicted RBP7.73□□□□□ -1.17
PCM1-220ENST00000523896 SNRKQ9NRH2 765 aa7.73□□□□□ -1.17
PCM1-220ENST00000523896 UBTFP17480 764 aaKnown RBP7.72□□□□□ -1.17
PCM1-220ENST00000523896 TREML4Q6UXN2 200 aa7.72□□□□□ -1.17
PCM1-220ENST00000523896 DZIP3Q86Y13 1208 aaKnown RBP7.72□□□□□ -1.17
PCM1-220ENST00000523896 MTMR14Q8NCE2 650 aa7.72□□□□□ -1.17
PCM1-220ENST00000523896 ADAM32Q8TC27 787 aa7.72□□□□□ -1.17
PCM1-220ENST00000523896 SLC16A10Q8TF71 515 aa7.72□□□□□ -1.17
PCM1-220ENST00000523896 KCTD15Q96SI1 283 aaPredicted RBP7.72□□□□□ -1.17
PCM1-220ENST00000523896 ZFAND3Q9H8U3 227 aa7.72□□□□□ -1.17
PCM1-220ENST00000523896 A6NJR5 290 aa7.71□□□□□ -1.18
PCM1-220ENST00000523896 BMP2P12643 396 aa7.71□□□□□ -1.18
PCM1-220ENST00000523896 C6orf118Q5T5N4 469 aa7.71□□□□□ -1.18
PCM1-220ENST00000523896 EPS8L1Q8TE68 723 aa7.71□□□□□ -1.18
PCM1-220ENST00000523896 KLF16Q9BXK1 252 aaPredicted RBP7.71□□□□□ -1.18
PCM1-220ENST00000523896 MAN1A2O60476 641 aa7.69□□□□□ -1.18
PCM1-220ENST00000523896 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
PCM1-220ENST00000523896 MEIOBQ8N635 442 aa7.69□□□□□ -1.18
PCM1-220ENST00000523896 ZNF592Q92610 1267 aa7.69□□□□□ -1.18
PCM1-220ENST00000523896 TSEN34Q9BSV6 310 aaKnown RBP7.69□□□□□ -1.18
PCM1-220ENST00000523896 TERTO14746 1132 aaKnown RBP7.68□□□□□ -1.18
PCM1-220ENST00000523896 PPP1R26Q5T8A7 1209 aaPredicted RBP7.68□□□□□ -1.18
PCM1-220ENST00000523896 ZNF330Q9Y3S2 320 aaPredicted RBP7.68□□□□□ -1.18
PCM1-220ENST00000523896 ZBBXA8MT70 800 aa7.67□□□□□ -1.18
PCM1-220ENST00000523896 RAD21O60216 631 aa7.67□□□□□ -1.18
PCM1-220ENST00000523896 RAB15P59190 212 aa7.67□□□□□ -1.18
PCM1-220ENST00000523896 CLUAP1Q96AJ1 413 aa7.67□□□□□ -1.18
PCM1-220ENST00000523896 POM121Q96HA1 1249 aa7.67□□□□□ -1.18
PCM1-220ENST00000523896 GJD4Q96KN9 370 aaPredicted RBP7.67□□□□□ -1.18
PCM1-220ENST00000523896 PRM3Q9NNZ6 103 aa7.67□□□□□ -1.18
PCM1-220ENST00000523896 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
PCM1-220ENST00000523896 COG6Q9Y2V7 657 aa7.67□□□□□ -1.18
PCM1-220ENST00000523896 INTS6LQ5JSJ4 861 aaKnown RBP7.66□□□□□ -1.18
PCM1-220ENST00000523896 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
PCM1-220ENST00000523896 PCDHB9Q9Y5E1 797 aa7.66□□□□□ -1.18
PCM1-220ENST00000523896 NFX1Q12986 1120 aaKnown RBP7.65□□□□□ -1.18
PCM1-220ENST00000523896 PROSER2Q86WR7 435 aaPredicted RBP7.65□□□□□ -1.18
PCM1-220ENST00000523896 NPAS3Q8IXF0 933 aa7.65□□□□□ -1.18
PCM1-220ENST00000523896 NDUFB9Q9Y6M9 179 aa7.65□□□□□ -1.18
PCM1-220ENST00000523896 MCCD1P59942 119 aaPredicted RBP7.63□□□□□ -1.19
PCM1-220ENST00000523896 SEPT12Q8IYM1 358 aa7.63□□□□□ -1.19
PCM1-220ENST00000523896 FNBP4Q8N3X1 1017 aaPredicted RBP7.63□□□□□ -1.19
PCM1-220ENST00000523896 IRF7Q92985 503 aa7.63□□□□□ -1.19
PCM1-220ENST00000523896 OCSTAMPQ9BR26 566 aa7.63□□□□□ -1.19
PCM1-220ENST00000523896 GDPD2Q9HCC8 539 aa7.63□□□□□ -1.19
PCM1-220ENST00000523896 TRAK2O60296 914 aa7.62□□□□□ -1.19
PCM1-220ENST00000523896 INSM1Q01101 510 aaPredicted RBP7.62□□□□□ -1.19
PCM1-220ENST00000523896 CBLBQ13191 982 aa7.62□□□□□ -1.19
PCM1-220ENST00000523896 CCDC125Q86Z20 511 aa7.62□□□□□ -1.19
PCM1-220ENST00000523896 TBC1D2BQ9UPU7 963 aa7.62□□□□□ -1.19
PCM1-220ENST00000523896 TTLL8A6PVC2 850 aa7.61□□□□□ -1.19
PCM1-220ENST00000523896 SOBPA7XYQ1 873 aa7.61□□□□□ -1.19
PCM1-220ENST00000523896 SUPT5HO00267 1087 aaKnown RBP7.61□□□□□ -1.19
PCM1-220ENST00000523896 FBXO45P0C2W1 286 aa7.61□□□□□ -1.19
PCM1-220ENST00000523896 NR1H3Q13133 447 aa7.61□□□□□ -1.19
PCM1-220ENST00000523896 RNF20Q5VTR2 975 aa7.61□□□□□ -1.19
PCM1-220ENST00000523896 Q6ZVU0 165 aa7.61□□□□□ -1.19
PCM1-220ENST00000523896 GPR37L1O60883 481 aa7.6□□□□□ -1.19
PCM1-220ENST00000523896 RELBQ01201 579 aa7.6□□□□□ -1.19
PCM1-220ENST00000523896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.6□□□□□ -1.192e-6■■□□□ 12.6
PCM1-220ENST00000523896 ESF1Q9H501 851 aaKnown RBP7.6□□□□□ -1.19
PCM1-220ENST00000523896 SOS2Q07890 1332 aaPredicted RBP7.59□□□□□ -1.19
PCM1-220ENST00000523896 ESPNB1AK53 854 aa7.59□□□□□ -1.19
PCM1-220ENST00000523896 ERVH48-1M5A8F1 160 aa7.59□□□□□ -1.19
PCM1-220ENST00000523896 ABL2P42684 1182 aa7.59□□□□□ -1.19
PCM1-220ENST00000523896 VEGFBP49765 207 aa7.59□□□□□ -1.19
PCM1-220ENST00000523896 WWC1Q8IX03 1113 aa7.59□□□□□ -1.19
PCM1-220ENST00000523896 ZNF784Q8NCA9 323 aaPredicted RBP7.59□□□□□ -1.19
PCM1-220ENST00000523896 POLMQ9NP87 494 aaPredicted RBP7.59□□□□□ -1.19
PCM1-220ENST00000523896 TMPRSS4Q9NRS4 437 aa7.59□□□□□ -1.19
PCM1-220ENST00000523896 H3BM21 787 aa7.58□□□□□ -1.2
PCM1-220ENST00000523896 SPINT1O43278 529 aa7.58□□□□□ -1.2
PCM1-220ENST00000523896 WIPF1O43516 503 aa7.58□□□□□ -1.2
PCM1-220ENST00000523896 ADH1AP07327 375 aa7.58□□□□□ -1.2
PCM1-220ENST00000523896 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
PCM1-220ENST00000523896 AGBL1Q96MI9 1066 aa7.58□□□□□ -1.2
PCM1-220ENST00000523896 IRF5Q13568 498 aa7.57□□□□□ -1.2
PCM1-220ENST00000523896 CYLDQ9NQC7 956 aa7.57□□□□□ -1.2
PCM1-220ENST00000523896 FIGNL2A6NMB9 653 aa7.56□□□□□ -1.2
PCM1-220ENST00000523896 DNMT3LQ9UJW3 386 aa7.56□□□□□ -1.2
PCM1-220ENST00000523896 GIGYF1O75420 1035 aaPredicted RBP7.55□□□□□ -1.2
PCM1-220ENST00000523896 INSM2Q96T92 566 aaPredicted RBP7.55□□□□□ -1.2
PCM1-220ENST00000523896 C1orf115Q9H7X2 142 aa7.55□□□□□ -1.2
PCM1-220ENST00000523896 ZNF395Q9H8N7 513 aaPredicted RBP7.55□□□□□ -1.2
PCM1-220ENST00000523896 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms