RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 PARP4Q9UKK3 1724 aaKnown RBP11.49□□□□□ -0.57
NSMCE2-213ENST00000523824 PROM2Q8N271 834 aa11.49□□□□□ -0.57
NSMCE2-213ENST00000523824 MARCH10Q8NA82 808 aaPredicted RBP11.49□□□□□ -0.57
NSMCE2-213ENST00000523824 CDCA7Q9BWT1 371 aaPredicted RBP11.49□□□□□ -0.57
NSMCE2-213ENST00000523824 PDGFDQ9GZP0 370 aaPredicted RBP11.49□□□□□ -0.57
NSMCE2-213ENST00000523824 ATF5Q9Y2D1 282 aaPredicted RBP11.49□□□□□ -0.57
NSMCE2-213ENST00000523824 CSB-PGBD3P0DP91 1061 aa11.48□□□□□ -0.57
NSMCE2-213ENST00000523824 STK32BQ9NY57 414 aa11.48□□□□□ -0.57
NSMCE2-213ENST00000523824 AXIN2Q9Y2T1 843 aa11.48□□□□□ -0.57
NSMCE2-213ENST00000523824 WDR17Q8IZU2 1322 aa11.48□□□□□ -0.57
NSMCE2-213ENST00000523824 EXOC5O00471 708 aa11.47□□□□□ -0.57
NSMCE2-213ENST00000523824 PEAK1Q9H792 1746 aa11.46□□□□□ -0.57
NSMCE2-213ENST00000523824 USP6P35125 1406 aa11.46□□□□□ -0.57
NSMCE2-213ENST00000523824 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
NSMCE2-213ENST00000523824 PTGER2P43116 358 aa11.46□□□□□ -0.57
NSMCE2-213ENST00000523824 SLC15A2Q16348 729 aa11.46□□□□□ -0.57
NSMCE2-213ENST00000523824 TXNRD1Q16881 649 aa11.46□□□□□ -0.57
NSMCE2-213ENST00000523824 KCNH5Q8NCM2 988 aa11.46□□□□□ -0.57
NSMCE2-213ENST00000523824 CARD10Q9BWT7 1032 aa11.46□□□□□ -0.57
NSMCE2-213ENST00000523824 SOX12O15370 315 aa11.45□□□□□ -0.58
NSMCE2-213ENST00000523824 ARHGEF25Q86VW2 580 aa11.45□□□□□ -0.58
NSMCE2-213ENST00000523824 ZNF784Q8NCA9 323 aaPredicted RBP11.45□□□□□ -0.58
NSMCE2-213ENST00000523824 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
NSMCE2-213ENST00000523824 SLIT3O75094 1523 aa11.45□□□□□ -0.58
NSMCE2-213ENST00000523824 BCL9O00512 1426 aa11.44□□□□□ -0.58
NSMCE2-213ENST00000523824 KIAA1210Q9ULL0 1709 aa11.44□□□□□ -0.58
NSMCE2-213ENST00000523824 SYT17Q9BSW7 474 aa11.44□□□□□ -0.58
NSMCE2-213ENST00000523824 ZNF692Q9BU19 519 aaPredicted RBP11.44□□□□□ -0.58
NSMCE2-213ENST00000523824 FHDC1Q9C0D6 1143 aaPredicted RBP11.44□□□□□ -0.58
NSMCE2-213ENST00000523824 LRRC37A3O60309 1634 aa11.44□□□□□ -0.58
NSMCE2-213ENST00000523824 RGPD3A6NKT7 1758 aaPredicted RBP11.44□□□□□ -0.58
NSMCE2-213ENST00000523824 RGPD4Q7Z3J3 1758 aa11.44□□□□□ -0.58
NSMCE2-213ENST00000523824 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
NSMCE2-213ENST00000523824 EVC2Q86UK5 1308 aa11.43□□□□□ -0.58
NSMCE2-213ENST00000523824 MTFR1LQ9H019 292 aa11.43□□□□□ -0.58
NSMCE2-213ENST00000523824 CASZ1Q86V15 1759 aa11.43□□□□□ -0.58
NSMCE2-213ENST00000523824 CPSF1Q10570 1443 aaKnown RBP11.43□□□□□ -0.58
NSMCE2-213ENST00000523824 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
NSMCE2-213ENST00000523824 UTRNP46939 3433 aa11.41□□□□□ -0.58
NSMCE2-213ENST00000523824 ACSBG1Q96GR2 724 aa11.41□□□□□ -0.58
NSMCE2-213ENST00000523824 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
NSMCE2-213ENST00000523824 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.58
NSMCE2-213ENST00000523824 MYOM1P52179 1685 aa11.4□□□□□ -0.58
NSMCE2-213ENST00000523824 ARXQ96QS3 562 aa11.4□□□□□ -0.58
NSMCE2-213ENST00000523824 COL18A1P39060 1754 aa11.4□□□□□ -0.58
NSMCE2-213ENST00000523824 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
NSMCE2-213ENST00000523824 SGIP1Q9BQI5 828 aa11.39□□□□□ -0.59
NSMCE2-213ENST00000523824 PIK3C2AO00443 1686 aa11.39□□□□□ -0.59
NSMCE2-213ENST00000523824 QRICH2Q9H0J4 1663 aa11.39□□□□□ -0.59
NSMCE2-213ENST00000523824 NLRP2Q9NX02 1062 aa11.38□□□□□ -0.59
NSMCE2-213ENST00000523824 AKAP12Q02952 1782 aa11.38□□□□□ -0.59
NSMCE2-213ENST00000523824 KTN1Q86UP2 1357 aaKnown RBP11.38□□□□□ -0.59
NSMCE2-213ENST00000523824 C1QTNF8P60827 252 aa11.37□□□□□ -0.59
NSMCE2-213ENST00000523824 GPR162Q16538 588 aa11.37□□□□□ -0.59
NSMCE2-213ENST00000523824 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
NSMCE2-213ENST00000523824 TNS2Q63HR2 1409 aa11.36□□□□□ -0.59
NSMCE2-213ENST00000523824 IL2RBP14784 551 aa11.36□□□□□ -0.59
NSMCE2-213ENST00000523824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.36□□□□□ -0.59
NSMCE2-213ENST00000523824 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
NSMCE2-213ENST00000523824 WNK3Q9BYP7 1800 aa11.36□□□□□ -0.59
NSMCE2-213ENST00000523824 RGPD5Q99666 1765 aa11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 ROCK2O75116 1388 aaKnown RBP11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 POLD1P28340 1107 aa11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 ZNF827Q17R98 1081 aa11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 ANKRD24Q8TF21 1146 aa11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 TRPM1Q7Z4N2 1603 aa11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 NFAT5O94916 1531 aa11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 ERBB3P21860 1342 aa11.34□□□□□ -0.59
NSMCE2-213ENST00000523824 MAP3K5Q99683 1374 aa11.33□□□□□ -0.6
NSMCE2-213ENST00000523824 SLC16A10Q8TF71 515 aa11.33□□□□□ -0.6
NSMCE2-213ENST00000523824 LRRC4BQ9NT99 713 aa11.33□□□□□ -0.6
NSMCE2-213ENST00000523824 ABCC6O95255 1503 aa11.32□□□□□ -0.6
NSMCE2-213ENST00000523824 SLC27A3Q5K4L6 730 aa11.32□□□□□ -0.6
NSMCE2-213ENST00000523824 NME9Q86XW9 330 aa11.32□□□□□ -0.6
NSMCE2-213ENST00000523824 DDX54Q8TDD1 881 aaKnown RBP11.32□□□□□ -0.6
NSMCE2-213ENST00000523824 TMC1Q8TDI8 760 aa11.32□□□□□ -0.6
NSMCE2-213ENST00000523824 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
NSMCE2-213ENST00000523824 NHSQ6T4R5 1651 aa11.32□□□□□ -0.6
NSMCE2-213ENST00000523824 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
NSMCE2-213ENST00000523824 GIGYF1O75420 1035 aaPredicted RBP11.31□□□□□ -0.6
NSMCE2-213ENST00000523824 NPM3O75607 178 aaKnown RBP11.31□□□□□ -0.6
NSMCE2-213ENST00000523824 NEUROD1Q13562 356 aa11.31□□□□□ -0.6
NSMCE2-213ENST00000523824 HDGFL2Q7Z4V5 671 aaPredicted RBP11.31□□□□□ -0.6
NSMCE2-213ENST00000523824 TFCP2L1Q9NZI6 479 aa11.31□□□□□ -0.6
NSMCE2-213ENST00000523824 SYTL4Q96C24 671 aaPredicted RBP11.3□□□□□ -0.6
NSMCE2-213ENST00000523824 SIN3AQ96ST3 1273 aa11.3□□□□□ -0.6
NSMCE2-213ENST00000523824 CHD4Q14839 1912 aa11.29□□□□□ -0.6
NSMCE2-213ENST00000523824 KCNA4P22459 653 aa11.29□□□□□ -0.6
NSMCE2-213ENST00000523824 LTV1Q96GA3 475 aaPredicted RBP11.29□□□□□ -0.6
NSMCE2-213ENST00000523824 PNPLA7Q6ZV29 1317 aa11.29□□□□□ -0.6
NSMCE2-213ENST00000523824 PAPPAQ13219 1627 aa11.28□□□□□ -0.6
NSMCE2-213ENST00000523824 PRIM1P49642 420 aaKnown RBP11.28□□□□□ -0.6
NSMCE2-213ENST00000523824 KCNQ4P56696 695 aa11.28□□□□□ -0.6
NSMCE2-213ENST00000523824 IP6K1Q92551 441 aa11.28□□□□□ -0.6
NSMCE2-213ENST00000523824 BTAF1O14981 1849 aa11.28□□□□□ -0.6
NSMCE2-213ENST00000523824 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
NSMCE2-213ENST00000523824 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
NSMCE2-213ENST00000523824 NLGN2Q8NFZ4 835 aa11.27□□□□□ -0.61
NSMCE2-213ENST00000523824 SLC12A5Q9H2X9 1139 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms