RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 PPP4R2Q9NY27 417 aa27.19■■□□□ 1.94
SQLE-206ENST00000523430 FOXO3O43524 673 aa27.18■■□□□ 1.94
SQLE-206ENST00000523430 XPCQ01831 940 aaPredicted RBP27.18■■□□□ 1.94
SQLE-206ENST00000523430 PHACTR3Q96KR7 559 aa27.18■■□□□ 1.94
SQLE-206ENST00000523430 RIPK4P57078 832 aa27.17■■□□□ 1.94
SQLE-206ENST00000523430 ATF3P18847 181 aa27.16■■□□□ 1.94
SQLE-206ENST00000523430 NFAT5O94916 1531 aa27.16■■□□□ 1.94
SQLE-206ENST00000523430 PLIN1O60240 522 aa27.15■■□□□ 1.94
SQLE-206ENST00000523430 AEBP1Q8IUX7 1158 aa27.15■■□□□ 1.94
SQLE-206ENST00000523430 LTN1O94822 1766 aa27.14■■□□□ 1.93
SQLE-206ENST00000523430 NEFMP07197 916 aa27.13■■□□□ 1.93
SQLE-206ENST00000523430 AMPHP49418 695 aa27.13■■□□□ 1.93
SQLE-206ENST00000523430 NFE2L2Q16236 605 aa27.12■■□□□ 1.93
SQLE-206ENST00000523430 MSH6P52701 1360 aa27.11■■□□□ 1.93
SQLE-206ENST00000523430 ZNF335Q9H4Z2 1342 aaPredicted RBP27.11■■□□□ 1.93
SQLE-206ENST00000523430 SULT6B1Q6IMI4 303 aa27.1■■□□□ 1.93
SQLE-206ENST00000523430 ARHGEF10O15013 1369 aa27.1■■□□□ 1.93
SQLE-206ENST00000523430 KIF24Q5T7B8 1368 aa27.1■■□□□ 1.93
SQLE-206ENST00000523430 B4GALNT3Q6L9W6 998 aa27.1■■□□□ 1.93
SQLE-206ENST00000523430 MYH16Q9H6N6 1097 aa27.09■■□□□ 1.93
SQLE-206ENST00000523430 SLIT3O75094 1523 aa27.08■■□□□ 1.93
SQLE-206ENST00000523430 HOXC9P31274 260 aa27.08■■□□□ 1.93
SQLE-206ENST00000523430 CADPS2Q86UW7 1296 aa27.08■■□□□ 1.93
SQLE-206ENST00000523430 DLG5Q8TDM6 1919 aa27.08■■□□□ 1.93
SQLE-206ENST00000523430 FANCIQ9NVI1 1328 aa27.08■■□□□ 1.93
SQLE-206ENST00000523430 KRT28Q7Z3Y7 464 aa27.07■■□□□ 1.92
SQLE-206ENST00000523430 RTL1A6NKG5 1358 aa27.07■■□□□ 1.92
SQLE-206ENST00000523430 ALS2Q96Q42 1657 aa27.07■■□□□ 1.92
SQLE-206ENST00000523430 EXOC6Q8TAG9 804 aa27.06■■□□□ 1.92
SQLE-206ENST00000523430 TSR2Q969E8 191 aaKnown RBP27.06■■□□□ 1.92
SQLE-206ENST00000523430 IL16Q14005 1332 aa27.06■■□□□ 1.92
SQLE-206ENST00000523430 BCAR3O75815 825 aa27.04■■□□□ 1.92
SQLE-206ENST00000523430 C20orf194Q5TEA3 1177 aa27.04■■□□□ 1.92
SQLE-206ENST00000523430 PHRF1Q9P1Y6 1649 aaKnown RBP27.04■■□□□ 1.92
SQLE-206ENST00000523430 DDX17Q92841 729 aaKnown RBP27.04■■□□□ 1.92
SQLE-206ENST00000523430 IGSF1Q8N6C5 1336 aa27.03■■□□□ 1.92
SQLE-206ENST00000523430 KDRP35968 1356 aa27.03■■□□□ 1.92
SQLE-206ENST00000523430 LMOD2Q6P5Q4 547 aa27.02■■□□□ 1.92
SQLE-206ENST00000523430 PELP1Q8IZL8 1130 aaKnown RBP27.02■■□□□ 1.92
SQLE-206ENST00000523430 THUMPD2Q9BTF0 503 aaKnown RBP27.02■■□□□ 1.92
SQLE-206ENST00000523430 USP19O94966 1318 aa27.01■■□□□ 1.91
SQLE-206ENST00000523430 PLEKHG5O94827 1062 aa27.01■■□□□ 1.91
SQLE-206ENST00000523430 KCNH5Q8NCM2 988 aa27.01■■□□□ 1.91
SQLE-206ENST00000523430 EYA1Q99502 592 aa27.01■■□□□ 1.91
SQLE-206ENST00000523430 CRBNQ96SW2 442 aa27■■□□□ 1.91
SQLE-206ENST00000523430 MED1Q15648 1581 aaPredicted RBP26.98■■□□□ 1.91
SQLE-206ENST00000523430 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.98■■□□□ 1.91
SQLE-206ENST00000523430 LTV1Q96GA3 475 aaPredicted RBP26.98■■□□□ 1.91
SQLE-206ENST00000523430 PXDNQ92626 1479 aa26.97■■□□□ 1.91
SQLE-206ENST00000523430 GCP02774 474 aa26.97■■□□□ 1.91
SQLE-206ENST00000523430 RARSP54136 660 aaKnown RBP26.97■■□□□ 1.91
SQLE-206ENST00000523430 ZBTB7CA1YPR0 619 aa26.96■■□□□ 1.91
SQLE-206ENST00000523430 EXOSC9Q06265 439 aaKnown RBP26.96■■□□□ 1.91
SQLE-206ENST00000523430 IP6K1Q92551 441 aa26.96■■□□□ 1.91
SQLE-206ENST00000523430 FAM83GA6ND36 823 aa26.96■■□□□ 1.91
SQLE-206ENST00000523430 LMOD3Q0VAK6 560 aa26.96■■□□□ 1.91
SQLE-206ENST00000523430 NPHP3Q7Z494 1330 aa26.95■■□□□ 1.91
SQLE-206ENST00000523430 CCDC136Q96JN2 1154 aa26.95■■□□□ 1.9
SQLE-206ENST00000523430 TNS3Q68CZ2 1445 aa26.93■■□□□ 1.9
SQLE-206ENST00000523430 DCTN1Q14203 1278 aa26.93■■□□□ 1.9
SQLE-206ENST00000523430 CALD1Q05682 793 aaKnown RBP26.92■■□□□ 1.9
SQLE-206ENST00000523430 BRINP3Q76B58 766 aa26.92■■□□□ 1.9
SQLE-206ENST00000523430 BCL2L13Q9BXK5 485 aa26.92■■□□□ 1.9
SQLE-206ENST00000523430 LAS1LQ9Y4W2 734 aaKnown RBP26.92■■□□□ 1.9
SQLE-206ENST00000523430 ARHGEF25Q86VW2 580 aa26.91■■□□□ 1.9
SQLE-206ENST00000523430 IFT57Q9NWB7 429 aa26.9■■□□□ 1.9
SQLE-206ENST00000523430 CT47B1P0C2W7 299 aaPredicted RBP26.89■■□□□ 1.9
SQLE-206ENST00000523430 CRYBG1Q9Y4K1 1723 aa26.89■■□□□ 1.9
SQLE-206ENST00000523430 RGPD2P0DJD1 1756 aa26.89■■□□□ 1.9
SQLE-206ENST00000523430 MTHFSDQ2M296 383 aaKnown RBP26.89■■□□□ 1.89
SQLE-206ENST00000523430 USHBP1Q8N6Y0 703 aa26.89■■□□□ 1.89
SQLE-206ENST00000523430 ZNF853P0CG23 659 aa26.87■■□□□ 1.89
SQLE-206ENST00000523430 CANXP27824 592 aaKnown RBP26.87■■□□□ 1.89
SQLE-206ENST00000523430 GNAI1P63096 354 aa26.86■■□□□ 1.89
SQLE-206ENST00000523430 FRAT1Q92837 279 aaPredicted RBP26.86■■□□□ 1.89
SQLE-206ENST00000523430 MBIPQ9NS73 344 aa26.86■■□□□ 1.89
SQLE-206ENST00000523430 MCM10Q7L590 875 aa26.85■■□□□ 1.89
SQLE-206ENST00000523430 SPATA31A3Q5VYP0 1347 aa26.85■■□□□ 1.89
SQLE-206ENST00000523430 SLAIN2Q9P270 581 aa26.85■■□□□ 1.89
SQLE-206ENST00000523430 NBPF6Q5VWK0 638 aa26.84■■□□□ 1.89
SQLE-206ENST00000523430 NBPF4Q96M43 638 aa26.84■■□□□ 1.89
SQLE-206ENST00000523430 CFAP44Q96MT7 982 aa26.84■■□□□ 1.89
SQLE-206ENST00000523430 CAMTA1Q9Y6Y1 1673 aa26.82■■□□□ 1.88
SQLE-206ENST00000523430 RGPD5Q99666 1765 aa26.82■■□□□ 1.88
SQLE-206ENST00000523430 GAS2L2Q8NHY3 880 aa26.82■■□□□ 1.88
SQLE-206ENST00000523430 LRRC59Q96AG4 307 aaKnown RBP26.82■■□□□ 1.88
SQLE-206ENST00000523430 LRRC37A3O60309 1634 aa26.82■■□□□ 1.88
SQLE-206ENST00000523430 ZC3H6P61129 1189 aaKnown RBP26.81■■□□□ 1.88
SQLE-206ENST00000523430 SSH1Q8WYL5 1049 aa26.81■■□□□ 1.88
SQLE-206ENST00000523430 SMC4Q9NTJ3 1288 aa26.81■■□□□ 1.88
SQLE-206ENST00000523430 CRB1P82279 1406 aa26.81■■□□□ 1.88
SQLE-206ENST00000523430 PDE3AQ14432 1141 aa26.81■■□□□ 1.88
SQLE-206ENST00000523430 CABLES1Q8TDN4 633 aa26.81■■□□□ 1.88
SQLE-206ENST00000523430 PANK1Q8TE04 598 aa26.81■■□□□ 1.88
SQLE-206ENST00000523430 TNNQ9UQP3 1299 aa26.81■■□□□ 1.88
SQLE-206ENST00000523430 AXIN2Q9Y2T1 843 aa26.81■■□□□ 1.88
SQLE-206ENST00000523430 ANKRD24Q8TF21 1146 aa26.79■■□□□ 1.88
SQLE-206ENST00000523430 NCAPD2Q15021 1401 aa26.79■■□□□ 1.88
SQLE-206ENST00000523430 COL18A1P39060 1754 aa26.77■■□□□ 1.88
SQLE-206ENST00000523430 TSPYL6Q8N831 410 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms