RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, human

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIRMA-208	ENST00000523263	TXNRD1	Q16881	649 aa		13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	PTF1A	Q7RTS3	328 aa		13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	ARHGEF25	Q86VW2	580 aa		13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	SYT17	Q9BSW7	474 aa		13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	CARD10	Q9BWT7	1032 aa		13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	STK32B	Q9NY57	414 aa		13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	CASZ1	Q86V15	1759 aa		13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	ZBTB7A	O95365	584 aa		13.74	□□□□□ -0.21
VIRMA-208	ENST00000523263	NBPF1	Q3BBV0	1214 aa		13.74	□□□□□ -0.21
VIRMA-208	ENST00000523263	KCNH5	Q8NCM2	988 aa		13.74	□□□□□ -0.21
VIRMA-208	ENST00000523263	SGIP1	Q9BQI5	828 aa		13.74	□□□□□ -0.21
VIRMA-208	ENST00000523263	MTFR1L	Q9H019	292 aa		13.74	□□□□□ -0.21
VIRMA-208	ENST00000523263	CABP2	Q9NPB3	220 aa		13.74	□□□□□ -0.21
VIRMA-208	ENST00000523263	CABP1	Q9NZU7	370 aa		13.74	□□□□□ -0.21
VIRMA-208	ENST00000523263	AXIN2	Q9Y2T1	843 aa		13.74	□□□□□ -0.21
VIRMA-208	ENST00000523263	KIAA1210	Q9ULL0	1709 aa		13.73	□□□□□ -0.21
VIRMA-208	ENST00000523263	ZNF692	Q9BU19	519 aa	Predicted RBP	13.73	□□□□□ -0.21
VIRMA-208	ENST00000523263	LRRC37A3	O60309	1634 aa		13.72	□□□□□ -0.21
VIRMA-208	ENST00000523263	EXOC5	O00471	708 aa		13.72	□□□□□ -0.21
VIRMA-208	ENST00000523263	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.72	□□□□□ -0.21
VIRMA-208	ENST00000523263	MAP3K5	Q99683	1374 aa		13.71	□□□□□ -0.21
VIRMA-208	ENST00000523263	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.71	□□□□□ -0.21
VIRMA-208	ENST00000523263	CPSF1	Q10570	1443 aa	Known RBP	13.71	□□□□□ -0.22
VIRMA-208	ENST00000523263	CCDC7	Q96M83	1385 aa		13.71	□□□□□ -0.22
VIRMA-208	ENST00000523263	ZBTB7C	A1YPR0	619 aa		13.7	□□□□□ -0.22
VIRMA-208	ENST00000523263	COL18A1	P39060	1754 aa		13.7	□□□□□ -0.22
VIRMA-208	ENST00000523263	SBF2	Q86WG5	1849 aa		13.69	□□□□□ -0.22
VIRMA-208	ENST00000523263	TTC21A	Q8NDW8	1320 aa		13.69	□□□□□ -0.22
VIRMA-208	ENST00000523263	TTC21B	Q7Z4L5	1316 aa		13.68	□□□□□ -0.22
VIRMA-208	ENST00000523263	C1QTNF8	P60827	252 aa		13.68	□□□□□ -0.22
VIRMA-208	ENST00000523263	EVC2	Q86UK5	1308 aa		13.67	□□□□□ -0.22
VIRMA-208	ENST00000523263	CSB-PGBD3	P0DP91	1061 aa		13.67	□□□□□ -0.22
VIRMA-208	ENST00000523263	ARX	Q96QS3	562 aa		13.67	□□□□□ -0.22
VIRMA-208	ENST00000523263	ABCC6	O95255	1503 aa		13.67	□□□□□ -0.22
VIRMA-208	ENST00000523263	MYOM1	P52179	1685 aa		13.66	□□□□□ -0.22
VIRMA-208	ENST00000523263	TNS2	Q63HR2	1409 aa		13.65	□□□□□ -0.22
VIRMA-208	ENST00000523263	SLC16A10	Q8TF71	515 aa		13.65	□□□□□ -0.22
VIRMA-208	ENST00000523263	PIK3C2A	O00443	1686 aa		13.64	□□□□□ -0.23
VIRMA-208	ENST00000523263	TRPM1	Q7Z4N2	1603 aa		13.64	□□□□□ -0.23
VIRMA-208	ENST00000523263	SENP3-EIF4A1	A0A087X0R7	540 aa		13.63	□□□□□ -0.23
VIRMA-208	ENST00000523263	USP31	Q70CQ4	1352 aa		13.62	□□□□□ -0.23
VIRMA-208	ENST00000523263	WNK3	Q9BYP7	1800 aa		13.62	□□□□□ -0.23
VIRMA-208	ENST00000523263	NFAT5	O94916	1531 aa		13.61	□□□□□ -0.23
VIRMA-208	ENST00000523263	IL2RB	P14784	551 aa		13.61	□□□□□ -0.23
VIRMA-208	ENST00000523263	ERBB3	P21860	1342 aa		13.61	□□□□□ -0.23
VIRMA-208	ENST00000523263	PAPPA	Q13219	1627 aa		13.61	□□□□□ -0.23
VIRMA-208	ENST00000523263	QRICH2	Q9H0J4	1663 aa		13.6	□□□□□ -0.23
VIRMA-208	ENST00000523263	SLC27A3	Q5K4L6	730 aa		13.6	□□□□□ -0.23
VIRMA-208	ENST00000523263	AKT1S1	Q96B36	256 aa		13.6	□□□□□ -0.23
VIRMA-208	ENST00000523263	ACSBG1	Q96GR2	724 aa		13.6	□□□□□ -0.23
VIRMA-208	ENST00000523263	LRRC4B	Q9NT99	713 aa		13.6	□□□□□ -0.23
VIRMA-208	ENST00000523263	AKAP12	Q02952	1782 aa		13.6	□□□□□ -0.23
VIRMA-208	ENST00000523263	GPR162	Q16538	588 aa		13.59	□□□□□ -0.23
VIRMA-208	ENST00000523263	ZNF827	Q17R98	1081 aa		13.59	□□□□□ -0.23
VIRMA-208	ENST00000523263	NHS	Q6T4R5	1651 aa		13.59	□□□□□ -0.23
VIRMA-208	ENST00000523263	KTN1	Q86UP2	1357 aa	Known RBP	13.58	□□□□□ -0.23
VIRMA-208	ENST00000523263	NLRP2	Q9NX02	1062 aa		13.58	□□□□□ -0.24
VIRMA-208	ENST00000523263	SOX12	O15370	315 aa		13.57	□□□□□ -0.24
VIRMA-208	ENST00000523263	GIGYF1	O75420	1035 aa	Predicted RBP	13.57	□□□□□ -0.24
VIRMA-208	ENST00000523263	POLD1	P28340	1107 aa		13.57	□□□□□ -0.24
VIRMA-208	ENST00000523263	IFFO2	Q5TF58	517 aa		13.57	□□□□□ -0.24
VIRMA-208	ENST00000523263	L3MBTL2	Q969R5	705 aa		13.56	□□□□□ -0.24
VIRMA-208	ENST00000523263	ANKRD24	Q8TF21	1146 aa		13.55	□□□□□ -0.24
VIRMA-208	ENST00000523263	PNPLA7	Q6ZV29	1317 aa		13.55	□□□□□ -0.24
VIRMA-208	ENST00000523263	SBNO2	Q9Y2G9	1366 aa		13.55	□□□□□ -0.24
VIRMA-208	ENST00000523263	CHD4	Q14839	1912 aa		13.54	□□□□□ -0.24
VIRMA-208	ENST00000523263	GRIN3B	O60391	1043 aa		13.54	□□□□□ -0.24
VIRMA-208	ENST00000523263	HMGB2	P26583	209 aa	Known RBP	13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	POTED	Q86YR6	584 aa		13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	IP6K1	Q92551	441 aa		13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	PUS7	Q96PZ0	661 aa	Known RBP	13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	TFCP2L1	Q9NZI6	479 aa		13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	ROCK2	O75116	1388 aa	Known RBP	13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	USP54	Q70EL1	1684 aa		13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	RGPD5	Q99666	1765 aa		13.52	□□□□□ -0.25
VIRMA-208	ENST00000523263	COL24A1	Q17RW2	1714 aa		13.51	□□□□□ -0.25
VIRMA-208	ENST00000523263	NME9	Q86XW9	330 aa		13.51	□□□□□ -0.25
VIRMA-208	ENST00000523263	CD163L1	Q9NR16	1453 aa		13.5	□□□□□ -0.25
VIRMA-208	ENST00000523263	ANKRD36B	Q8N2N9	1353 aa		13.5	□□□□□ -0.25
VIRMA-208	ENST00000523263	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.5	□□□□□ -0.25
VIRMA-208	ENST00000523263	QSER1	Q2KHR3	1735 aa		13.5	□□□□□ -0.25
VIRMA-208	ENST00000523263	EDC4	Q6P2E9	1401 aa	Known RBP	13.49	□□□□□ -0.25
VIRMA-208	ENST00000523263	UTRN	P46939	3433 aa		13.49	□□□□□ -0.25
VIRMA-208	ENST00000523263	BTAF1	O14981	1849 aa		13.49	□□□□□ -0.25
VIRMA-208	ENST00000523263	NLGN2	Q8NFZ4	835 aa		13.49	□□□□□ -0.25
VIRMA-208	ENST00000523263	DDX54	Q8TDD1	881 aa	Known RBP	13.49	□□□□□ -0.25
VIRMA-208	ENST00000523263	PRIM1	P49642	420 aa	Known RBP	13.48	□□□□□ -0.25
VIRMA-208	ENST00000523263	MON2	Q7Z3U7	1717 aa		13.47	□□□□□ -0.25
VIRMA-208	ENST00000523263	YBX3	P16989	372 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
VIRMA-208	ENST00000523263	KLHL34	Q8N239	644 aa		13.47	□□□□□ -0.25
VIRMA-208	ENST00000523263	TERF2IP	Q9NYB0	399 aa		13.47	□□□□□ -0.25
VIRMA-208	ENST00000523263	NSD2	O96028	1365 aa		13.46	□□□□□ -0.25
VIRMA-208	ENST00000523263	PELP1	Q8IZL8	1130 aa	Known RBP	13.46	□□□□□ -0.25
VIRMA-208	ENST00000523263	ZCRB1	Q8TBF4	217 aa	Known RBP	13.46	□□□□□ -0.25
VIRMA-208	ENST00000523263	SLC12A5	Q9H2X9	1139 aa		13.46	□□□□□ -0.25
VIRMA-208	ENST00000523263	CD2AP	Q9Y5K6	639 aa		13.46	□□□□□ -0.25
VIRMA-208	ENST00000523263	SHANK3	Q9BYB0	1731 aa		13.45	□□□□□ -0.26
VIRMA-208	ENST00000523263	COL23A1	Q86Y22	540 aa	Predicted RBP	13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms