RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 IQSEC2Q5JU85 1478 aa8.91□□□□□ -0.98
PVT1-217ENST00000523190 FLT4P35916 1363 aa8.91□□□□□ -0.98
PVT1-217ENST00000523190 USP19O94966 1318 aa8.91□□□□□ -0.98
PVT1-217ENST00000523190 IL13P35225 146 aa8.91□□□□□ -0.98
PVT1-217ENST00000523190 NHSL1Q5SYE7 1610 aa8.91□□□□□ -0.98
PVT1-217ENST00000523190 MED1Q15648 1581 aaPredicted RBP8.9□□□□□ -0.98
PVT1-217ENST00000523190 ZBTB7CA1YPR0 619 aa8.9□□□□□ -0.98
PVT1-217ENST00000523190 APAF1O14727 1248 aa8.9□□□□□ -0.98
PVT1-217ENST00000523190 AMPHP49418 695 aa8.9□□□□□ -0.98
PVT1-217ENST00000523190 EIF4A2Q14240 407 aaKnown RBP8.9□□□□□ -0.98
PVT1-217ENST00000523190 RUNDC1Q96C34 613 aa8.9□□□□□ -0.98
PVT1-217ENST00000523190 LTN1O94822 1766 aa8.9□□□□□ -0.98
PVT1-217ENST00000523190 PHRF1Q9P1Y6 1649 aaKnown RBP8.9□□□□□ -0.99
PVT1-217ENST00000523190 RTL1A6NKG5 1358 aa8.89□□□□□ -0.99
PVT1-217ENST00000523190 SPATA31A3Q5VYP0 1347 aa8.89□□□□□ -0.99
PVT1-217ENST00000523190 HMOX1P09601 288 aa8.89□□□□□ -0.99
PVT1-217ENST00000523190 HOXC9P31274 260 aa8.89□□□□□ -0.99
PVT1-217ENST00000523190 HSP90AB2PQ58FF8 381 aa8.89□□□□□ -0.99
PVT1-217ENST00000523190 KCNH5Q8NCM2 988 aa8.89□□□□□ -0.99
PVT1-217ENST00000523190 RGPD1P0DJD0 1748 aa8.88□□□□□ -0.99
PVT1-217ENST00000523190 CRYBG1Q9Y4K1 1723 aa8.88□□□□□ -0.99
PVT1-217ENST00000523190 KIF24Q5T7B8 1368 aa8.88□□□□□ -0.99
PVT1-217ENST00000523190 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
PVT1-217ENST00000523190 SOS2Q07890 1332 aaPredicted RBP8.88□□□□□ -0.99
PVT1-217ENST00000523190 TCP11L2Q8N4U5 519 aa8.88□□□□□ -0.99
PVT1-217ENST00000523190 RSPH6AQ9H0K4 717 aa8.88□□□□□ -0.99
PVT1-217ENST00000523190 RRP7AQ9Y3A4 280 aaKnown RBP8.88□□□□□ -0.99
PVT1-217ENST00000523190 ARHGEF10O15013 1369 aa8.87□□□□□ -0.99
PVT1-217ENST00000523190 MAPK8IP3Q9UPT6 1336 aa8.87□□□□□ -0.99
PVT1-217ENST00000523190 GCP02774 474 aa8.87□□□□□ -0.99
PVT1-217ENST00000523190 PRKAR2BP31323 418 aa8.87□□□□□ -0.99
PVT1-217ENST00000523190 PLEKHF1Q96S99 279 aa8.87□□□□□ -0.99
PVT1-217ENST00000523190 ZNF521Q96K83 1311 aa8.86□□□□□ -0.99
PVT1-217ENST00000523190 FCHSD2O94868 740 aa8.86□□□□□ -0.99
PVT1-217ENST00000523190 NEUROD2Q15784 382 aa8.86□□□□□ -0.99
PVT1-217ENST00000523190 ARHGEF25Q86VW2 580 aa8.86□□□□□ -0.99
PVT1-217ENST00000523190 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
PVT1-217ENST00000523190 CABLES1Q8TDN4 633 aa8.86□□□□□ -0.99
PVT1-217ENST00000523190 IP6K1Q92551 441 aa8.86□□□□□ -0.99
PVT1-217ENST00000523190 LTV1Q96GA3 475 aaPredicted RBP8.86□□□□□ -0.99
PVT1-217ENST00000523190 CDCA7LQ96GN5 454 aa8.86□□□□□ -0.99
PVT1-217ENST00000523190 AHDC1Q5TGY3 1603 aaPredicted RBP8.86□□□□□ -0.99
PVT1-217ENST00000523190 TMPOP42166 694 aaKnown RBP8.85□□□□□ -0.99
PVT1-217ENST00000523190 ZC3H6P61129 1189 aaKnown RBP8.85□□□□□ -0.99
PVT1-217ENST00000523190 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
PVT1-217ENST00000523190 SULT6B1Q6IMI4 303 aa8.85□□□□□ -0.99
PVT1-217ENST00000523190 PNNQ9H307 717 aaKnown RBP8.85□□□□□ -0.99
PVT1-217ENST00000523190 ABCA3Q99758 1704 aa8.85□□□□□ -0.99
PVT1-217ENST00000523190 IGSF1Q8N6C5 1336 aa8.84□□□□□ -0.99
PVT1-217ENST00000523190 NEFMP07197 916 aa8.84□□□□□ -0.99
PVT1-217ENST00000523190 NGEFQ8N5V2 710 aa8.84□□□□□ -0.99
PVT1-217ENST00000523190 EYA1Q99502 592 aa8.84□□□□□ -0.99
PVT1-217ENST00000523190 GOLGA2Q08379 1002 aa8.83□□□□□ -1
PVT1-217ENST00000523190 WWC1Q8IX03 1113 aa8.83□□□□□ -1
PVT1-217ENST00000523190 PHACTR3Q96KR7 559 aa8.83□□□□□ -1
PVT1-217ENST00000523190 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
PVT1-217ENST00000523190 GTF3C3Q9Y5Q9 886 aa8.83□□□□□ -1
PVT1-217ENST00000523190 COL18A1P39060 1754 aa8.82□□□□□ -1
PVT1-217ENST00000523190 TOM1O60784 492 aa8.82□□□□□ -1
PVT1-217ENST00000523190 HAP1P54257 671 aaPredicted RBP8.82□□□□□ -1
PVT1-217ENST00000523190 RIPK4P57078 832 aa8.82□□□□□ -1
PVT1-217ENST00000523190 PIP4K2BP78356 416 aa8.82□□□□□ -1
PVT1-217ENST00000523190 CHRNA2Q15822 529 aa8.82□□□□□ -1
PVT1-217ENST00000523190 NFE2L2Q16236 605 aa8.82□□□□□ -1
PVT1-217ENST00000523190 CCDC27Q2M243 656 aa8.82□□□□□ -1
PVT1-217ENST00000523190 USHBP1Q8N6Y0 703 aa8.82□□□□□ -1
PVT1-217ENST00000523190 ANKRD24Q8TF21 1146 aa8.82□□□□□ -1
PVT1-217ENST00000523190 LRRC59Q96AG4 307 aaKnown RBP8.82□□□□□ -1
PVT1-217ENST00000523190 SPINK5Q9NQ38 1064 aaPredicted RBP8.82□□□□□ -1
PVT1-217ENST00000523190 U3KPZ7 1027 aaPredicted RBP8.82□□□□□ -1
PVT1-217ENST00000523190 KDRP35968 1356 aa8.82□□□□□ -1
PVT1-217ENST00000523190 KIAA0232Q92628 1395 aa8.82□□□□□ -1
PVT1-217ENST00000523190 PHLPP1O60346 1717 aa8.82□□□□□ -1
PVT1-217ENST00000523190 RGPD2P0DJD1 1756 aa8.81□□□□□ -1
PVT1-217ENST00000523190 RGPD5Q99666 1765 aa8.81□□□□□ -1
PVT1-217ENST00000523190 ABCC6O95255 1503 aa8.81□□□□□ -1
PVT1-217ENST00000523190 COL16A1Q07092 1604 aaPredicted RBP8.81□□□□□ -1
PVT1-217ENST00000523190 UBAP1LF5GYI3 381 aa8.81□□□□□ -1
PVT1-217ENST00000523190 SLFN5Q08AF3 891 aa8.81□□□□□ -1
PVT1-217ENST00000523190 NBPF6Q5VWK0 638 aa8.81□□□□□ -1
PVT1-217ENST00000523190 DUSP27Q5VZP5 1158 aa8.81□□□□□ -1
PVT1-217ENST00000523190 NBPF4Q96M43 638 aa8.81□□□□□ -1
PVT1-217ENST00000523190 TRIM35Q9UPQ4 493 aa8.81□□□□□ -1
PVT1-217ENST00000523190 AXIN2Q9Y2T1 843 aa8.81□□□□□ -1
PVT1-217ENST00000523190 CPDO75976 1380 aa8.81□□□□□ -1
PVT1-217ENST00000523190 CAMTA1Q9Y6Y1 1673 aa8.81□□□□□ -1
PVT1-217ENST00000523190 WDR63Q8IWG1 891 aa8.8□□□□□ -1
PVT1-217ENST00000523190 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
PVT1-217ENST00000523190 COL22A1Q8NFW1 1626 aaPredicted RBP8.8□□□□□ -1
PVT1-217ENST00000523190 ERBB3P21860 1342 aa8.8□□□□□ -1
PVT1-217ENST00000523190 LMO7Q8WWI1 1683 aa8.79□□□□□ -1
PVT1-217ENST00000523190 E9PSI1 815 aa8.79□□□□□ -1
PVT1-217ENST00000523190 CERKQ8TCT0 537 aa8.79□□□□□ -1
PVT1-217ENST00000523190 PRDM11Q9NQV5 511 aa8.79□□□□□ -1
PVT1-217ENST00000523190 ZNF219Q9P2Y4 722 aaPredicted RBP8.79□□□□□ -1
PVT1-217ENST00000523190 DLG5Q8TDM6 1919 aa8.79□□□□□ -1
PVT1-217ENST00000523190 NCAPD2Q15021 1401 aa8.79□□□□□ -1
PVT1-217ENST00000523190 TRMT2AQ8IZ69 625 aaKnown RBP8.78□□□□□ -1
PVT1-217ENST00000523190 THUMPD2Q9BTF0 503 aaKnown RBP8.78□□□□□ -1
PVT1-217ENST00000523190 FAM208AQ9UK61 1670 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms