RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LTN1O94822 1766 aa22.02■■□□□ 1.11
MRPS28-209ENST00000522987 CSB-PGBD3P0DP91 1061 aa22.01■■□□□ 1.11
MRPS28-209ENST00000522987 OVOS2A0A0G2JMS6 1433 aa22■■□□□ 1.11
MRPS28-209ENST00000522987 OVOS2A0A0J9YW53 1432 aa22■■□□□ 1.11
MRPS28-209ENST00000522987 OVOS2Q6IE36 1432 aa22■■□□□ 1.11
MRPS28-209ENST00000522987 DDB1Q16531 1140 aa22■■□□□ 1.11
MRPS28-209ENST00000522987 PTF1AQ7RTS3 328 aa22■■□□□ 1.11
MRPS28-209ENST00000522987 NFAT5O94916 1531 aa22■■□□□ 1.11
MRPS28-209ENST00000522987 KAT6BQ8WYB5 2073 aa21.99■■□□□ 1.11
MRPS28-209ENST00000522987 ARHGEF25Q86VW2 580 aa21.99■■□□□ 1.11
MRPS28-209ENST00000522987 ZNF692Q9BU19 519 aaPredicted RBP21.99■■□□□ 1.11
MRPS28-209ENST00000522987 CARD11Q9BXL7 1154 aa21.99■■□□□ 1.11
MRPS28-209ENST00000522987 WDR17Q8IZU2 1322 aa21.99■■□□□ 1.11
MRPS28-209ENST00000522987 PARD3Q8TEW0 1356 aa21.99■■□□□ 1.11
MRPS28-209ENST00000522987 TMC1Q8TDI8 760 aa21.98■■□□□ 1.11
MRPS28-209ENST00000522987 TTC21AQ8NDW8 1320 aa21.97■■□□□ 1.11
MRPS28-209ENST00000522987 KCNH5Q8NCM2 988 aa21.96■■□□□ 1.11
MRPS28-209ENST00000522987 NBPF14Q5TI25 921 aa21.95■■□□□ 1.1
MRPS28-209ENST00000522987 NME9Q86XW9 330 aa21.95■■□□□ 1.1
MRPS28-209ENST00000522987 MARCH10Q8NA82 808 aaPredicted RBP21.95■■□□□ 1.1
MRPS28-209ENST00000522987 CD163L1Q9NR16 1453 aa21.94■■□□□ 1.1
MRPS28-209ENST00000522987 RGPD3A6NKT7 1758 aaPredicted RBP21.93■■□□□ 1.1
MRPS28-209ENST00000522987 RGPD4Q7Z3J3 1758 aa21.93■■□□□ 1.1
MRPS28-209ENST00000522987 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
MRPS28-209ENST00000522987 SLC12A5Q9H2X9 1139 aa21.92■■□□□ 1.1
MRPS28-209ENST00000522987 USP54Q70EL1 1684 aa21.91■■□□□ 1.1
MRPS28-209ENST00000522987 CARD10Q9BWT7 1032 aa21.9■■□□□ 1.1
MRPS28-209ENST00000522987 SBNO2Q9Y2G9 1366 aa21.89■■□□□ 1.1
MRPS28-209ENST00000522987 ANO8Q9HCE9 1232 aaPredicted RBP21.89■■□□□ 1.09
MRPS28-209ENST00000522987 HDGFL2Q7Z4V5 671 aaPredicted RBP21.87■■□□□ 1.09
MRPS28-209ENST00000522987 BCL11BQ9C0K0 894 aaPredicted RBP21.87■■□□□ 1.09
MRPS28-209ENST00000522987 NLRP2Q9NX02 1062 aa21.87■■□□□ 1.09
MRPS28-209ENST00000522987 C11orf95C9JLR9 678 aaPredicted RBP21.86■■□□□ 1.09
MRPS28-209ENST00000522987 EXOC5O00471 708 aa21.86■■□□□ 1.09
MRPS28-209ENST00000522987 A0A1W2PP64 1363 aa21.86■■□□□ 1.09
MRPS28-209ENST00000522987 USP31Q70CQ4 1352 aa21.86■■□□□ 1.09
MRPS28-209ENST00000522987 CASZ1Q86V15 1759 aa21.85■■□□□ 1.09
MRPS28-209ENST00000522987 ACSBG1Q96GR2 724 aa21.85■■□□□ 1.09
MRPS28-209ENST00000522987 CDCA7Q9BWT1 371 aaPredicted RBP21.85■■□□□ 1.09
MRPS28-209ENST00000522987 PPP1R1BQ9UD71 204 aaPredicted RBP21.85■■□□□ 1.09
MRPS28-209ENST00000522987 CCDC7Q96M83 1385 aa21.85■■□□□ 1.09
MRPS28-209ENST00000522987 RGPD2P0DJD1 1756 aa21.84■■□□□ 1.09
MRPS28-209ENST00000522987 KCNQ2O43526 872 aa21.84■■□□□ 1.09
MRPS28-209ENST00000522987 PDGFDQ9GZP0 370 aaPredicted RBP21.84■■□□□ 1.09
MRPS28-209ENST00000522987 ABCC6O95255 1503 aa21.84■■□□□ 1.09
MRPS28-209ENST00000522987 TNS2Q63HR2 1409 aa21.83■■□□□ 1.09
MRPS28-209ENST00000522987 EDC4Q6P2E9 1401 aaKnown RBP21.83■■□□□ 1.09
MRPS28-209ENST00000522987 NHSQ6T4R5 1651 aa21.83■■□□□ 1.09
MRPS28-209ENST00000522987 PLSCR1O15162 318 aa21.83■■□□□ 1.09
MRPS28-209ENST00000522987 PROM2Q8N271 834 aa21.83■■□□□ 1.09
MRPS28-209ENST00000522987 ERBB3P21860 1342 aa21.82■■□□□ 1.08
MRPS28-209ENST00000522987 ANKRD24Q8TF21 1146 aa21.82■■□□□ 1.08
MRPS28-209ENST00000522987 SPON1Q9HCB6 807 aa21.82■■□□□ 1.08
MRPS28-209ENST00000522987 BTAF1O14981 1849 aa21.82■■□□□ 1.08
MRPS28-209ENST00000522987 LTV1Q96GA3 475 aaPredicted RBP21.81■■□□□ 1.08
MRPS28-209ENST00000522987 TERF2IPQ9NYB0 399 aa21.81■■□□□ 1.08
MRPS28-209ENST00000522987 ST20-MTHFSA0A0A6YYL1 179 aa21.8■■□□□ 1.08
MRPS28-209ENST00000522987 TXNRD1Q16881 649 aa21.79■■□□□ 1.08
MRPS28-209ENST00000522987 ZBTB7AO95365 584 aa21.78■■□□□ 1.08
MRPS28-209ENST00000522987 FBLN1P23142 703 aa21.78■■□□□ 1.08
MRPS28-209ENST00000522987 MYOM1P52179 1685 aa21.77■■□□□ 1.08
MRPS28-209ENST00000522987 IL2RBP14784 551 aa21.77■■□□□ 1.08
MRPS28-209ENST00000522987 BCL9O00512 1426 aa21.77■■□□□ 1.08
MRPS28-209ENST00000522987 TESK2Q96S53 571 aa21.76■■□□□ 1.07
MRPS28-209ENST00000522987 ATF5Q9Y2D1 282 aaPredicted RBP21.75■■□□□ 1.07
MRPS28-209ENST00000522987 FAM208AQ9UK61 1670 aaKnown RBP21.75■■□□□ 1.07
MRPS28-209ENST00000522987 STK32BQ9NY57 414 aa21.74■■□□□ 1.07
MRPS28-209ENST00000522987 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
MRPS28-209ENST00000522987 DDX54Q8TDD1 881 aaKnown RBP21.71■■□□□ 1.07
MRPS28-209ENST00000522987 IP6K1Q92551 441 aa21.71■■□□□ 1.07
MRPS28-209ENST00000522987 COG3Q96JB2 828 aa21.71■■□□□ 1.07
MRPS28-209ENST00000522987 SHANK3Q9BYB0 1731 aa21.7■■□□□ 1.06
MRPS28-209ENST00000522987 SLC15A2Q16348 729 aa21.7■■□□□ 1.06
MRPS28-209ENST00000522987 MAP3K19Q56UN5 1328 aa21.7■■□□□ 1.06
MRPS28-209ENST00000522987 KIF20BQ96Q89 1820 aa21.69■■□□□ 1.06
MRPS28-209ENST00000522987 AMPHP49418 695 aa21.69■■□□□ 1.06
MRPS28-209ENST00000522987 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
MRPS28-209ENST00000522987 NINLQ9Y2I6 1382 aa21.68■■□□□ 1.06
MRPS28-209ENST00000522987 PAPPAQ13219 1627 aa21.68■■□□□ 1.06
MRPS28-209ENST00000522987 YY1P25490 414 aa21.67■■□□□ 1.06
MRPS28-209ENST00000522987 HOXC9P31274 260 aa21.67■■□□□ 1.06
MRPS28-209ENST00000522987 TUBGCP6Q96RT7 1819 aa21.66■■□□□ 1.06
MRPS28-209ENST00000522987 USP47Q96K76 1375 aa21.66■■□□□ 1.06
MRPS28-209ENST00000522987 RRS1Q15050 365 aaKnown RBP21.66■■□□□ 1.06
MRPS28-209ENST00000522987 GGNBP2Q9H3C7 697 aa21.66■■□□□ 1.06
MRPS28-209ENST00000522987 PTGER2P43116 358 aa21.65■■□□□ 1.06
MRPS28-209ENST00000522987 SYTL4Q96C24 671 aaPredicted RBP21.65■■□□□ 1.06
MRPS28-209ENST00000522987 ANKRD36BQ8N2N9 1353 aa21.64■■□□□ 1.06
MRPS28-209ENST00000522987 KCNQ4P56696 695 aa21.64■■□□□ 1.05
MRPS28-209ENST00000522987 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
MRPS28-209ENST00000522987 ZNF827Q17R98 1081 aa21.64■■□□□ 1.05
MRPS28-209ENST00000522987 USHBP1Q8N6Y0 703 aa21.64■■□□□ 1.05
MRPS28-209ENST00000522987 DCAF8L1A6NGE4 600 aa21.63■■□□□ 1.05
MRPS28-209ENST00000522987 LRRC4BQ9NT99 713 aa21.63■■□□□ 1.05
MRPS28-209ENST00000522987 MEGF6O75095 1541 aa21.62■■□□□ 1.05
MRPS28-209ENST00000522987 TMF1P82094 1093 aa21.61■■□□□ 1.05
MRPS28-209ENST00000522987 FYB1O15117 783 aa21.6■■□□□ 1.05
MRPS28-209ENST00000522987 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
MRPS28-209ENST00000522987 LY75O60449 1722 aa21.59■■□□□ 1.05
MRPS28-209ENST00000522987 PRIM1P49642 420 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms