RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 TNS3Q68CZ2 1445 aa35.86■■■■□ 3.33
TRNP1-201ENST00000522111 USP19O94966 1318 aa35.86■■■■□ 3.33
TRNP1-201ENST00000522111 SUPT16HQ9Y5B9 1047 aaKnown RBP35.85■■■■□ 3.33
TRNP1-201ENST00000522111 PNNQ9H307 717 aaKnown RBP35.84■■■■□ 3.33
TRNP1-201ENST00000522111 MED1Q15648 1581 aaPredicted RBP35.83■■■■□ 3.33
TRNP1-201ENST00000522111 KIF24Q5T7B8 1368 aa35.82■■■■□ 3.32
TRNP1-201ENST00000522111 GOLGA2Q08379 1002 aa35.82■■■■□ 3.32
TRNP1-201ENST00000522111 AEBP1Q8IUX7 1158 aa35.82■■■■□ 3.32
TRNP1-201ENST00000522111 WWC1Q8IX03 1113 aa35.82■■■■□ 3.32
TRNP1-201ENST00000522111 SPATA31A3Q5VYP0 1347 aa35.81■■■■□ 3.32
TRNP1-201ENST00000522111 AEBP2Q6ZN18 517 aaPredicted RBP35.81■■■■□ 3.32
TRNP1-201ENST00000522111 NGEFQ8N5V2 710 aa35.81■■■■□ 3.32
TRNP1-201ENST00000522111 RGPD1P0DJD0 1748 aa35.81■■■■□ 3.32
TRNP1-201ENST00000522111 LTV1Q96GA3 475 aaPredicted RBP35.8■■■■□ 3.32
TRNP1-201ENST00000522111 SULT6B1Q6IMI4 303 aa35.8■■■■□ 3.32
TRNP1-201ENST00000522111 RTL1A6NKG5 1358 aa35.79■■■■□ 3.32
TRNP1-201ENST00000522111 NEFMP07197 916 aa35.78■■■■□ 3.32
TRNP1-201ENST00000522111 CABLES1Q8TDN4 633 aa35.78■■■■□ 3.32
TRNP1-201ENST00000522111 TMPOP42166 694 aaKnown RBP35.78■■■■□ 3.32
TRNP1-201ENST00000522111 PHACTR3Q96KR7 559 aa35.78■■■■□ 3.32
TRNP1-201ENST00000522111 SPINK5Q9NQ38 1064 aaPredicted RBP35.76■■■■□ 3.31
TRNP1-201ENST00000522111 SOS2Q07890 1332 aaPredicted RBP35.76■■■■□ 3.31
TRNP1-201ENST00000522111 PHRF1Q9P1Y6 1649 aaKnown RBP35.76■■■■□ 3.31
TRNP1-201ENST00000522111 IP6K1Q92551 441 aa35.75■■■■□ 3.31
TRNP1-201ENST00000522111 NHSL1Q5SYE7 1610 aa35.75■■■■□ 3.31
TRNP1-201ENST00000522111 ARHGEF10O15013 1369 aa35.74■■■■□ 3.31
TRNP1-201ENST00000522111 ZC3H6P61129 1189 aaKnown RBP35.74■■■■□ 3.31
TRNP1-201ENST00000522111 ARHGEF25Q86VW2 580 aa35.74■■■■□ 3.31
TRNP1-201ENST00000522111 PHF23Q9BUL5 403 aaPredicted RBP35.73■■■■□ 3.31
TRNP1-201ENST00000522111 EYA1Q99502 592 aa35.72■■■■□ 3.31
TRNP1-201ENST00000522111 ROBO1Q9Y6N7 1651 aa35.72■■■■□ 3.31
TRNP1-201ENST00000522111 RIPK4P57078 832 aa35.71■■■■□ 3.31
TRNP1-201ENST00000522111 SLFN5Q08AF3 891 aa35.71■■■■□ 3.31
TRNP1-201ENST00000522111 CCDC27Q2M243 656 aa35.71■■■■□ 3.31
TRNP1-201ENST00000522111 DUSP27Q5VZP5 1158 aa35.69■■■■□ 3.3
TRNP1-201ENST00000522111 CRYBG1Q9Y4K1 1723 aa35.69■■■■□ 3.3
TRNP1-201ENST00000522111 IGSF1Q8N6C5 1336 aa35.68■■■■□ 3.3
TRNP1-201ENST00000522111 TRIM35Q9UPQ4 493 aa35.67■■■■□ 3.3
TRNP1-201ENST00000522111 NEFLP07196 543 aa35.66■■■■□ 3.3
TRNP1-201ENST00000522111 E9PSI1 815 aa35.65■■■■□ 3.3
TRNP1-201ENST00000522111 NFE2L2Q16236 605 aa35.65■■■■□ 3.3
TRNP1-201ENST00000522111 FKBP8Q14318 412 aa35.64■■■■□ 3.3
TRNP1-201ENST00000522111 NCBP3Q53F19 620 aaKnown RBP35.64■■■■□ 3.3
TRNP1-201ENST00000522111 USHBP1Q8N6Y0 703 aa35.63■■■■□ 3.29
TRNP1-201ENST00000522111 AXIN2Q9Y2T1 843 aa35.63■■■■□ 3.29
TRNP1-201ENST00000522111 RGPD5Q99666 1765 aa35.63■■■■□ 3.29
TRNP1-201ENST00000522111 WDR63Q8IWG1 891 aa35.62■■■■□ 3.29
TRNP1-201ENST00000522111 KDRP35968 1356 aa35.62■■■■□ 3.29
TRNP1-201ENST00000522111 IRX6P78412 446 aaPredicted RBP35.62■■■■□ 3.29
TRNP1-201ENST00000522111 RGPD2P0DJD1 1756 aa35.61■■■■□ 3.29
TRNP1-201ENST00000522111 DLG5Q8TDM6 1919 aa35.61■■■■□ 3.29
TRNP1-201ENST00000522111 TRMT2AQ8IZ69 625 aaKnown RBP35.61■■■■□ 3.29
TRNP1-201ENST00000522111 RCAN3Q9UKA8 241 aa35.6■■■■□ 3.29
TRNP1-201ENST00000522111 LRRC59Q96AG4 307 aaKnown RBP35.59■■■■□ 3.29
TRNP1-201ENST00000522111 CHRNA2Q15822 529 aa35.57■■■■□ 3.28
TRNP1-201ENST00000522111 NBPF6Q5VWK0 638 aa35.57■■■■□ 3.28
TRNP1-201ENST00000522111 ANKRD24Q8TF21 1146 aa35.57■■■■□ 3.28
TRNP1-201ENST00000522111 NBPF4Q96M43 638 aa35.57■■■■□ 3.28
TRNP1-201ENST00000522111 KIAA0232Q92628 1395 aa35.57■■■■□ 3.28
TRNP1-201ENST00000522111 HAP1P54257 671 aaPredicted RBP35.56■■■■□ 3.28
TRNP1-201ENST00000522111 ABCA3Q99758 1704 aa35.54■■■■□ 3.28
TRNP1-201ENST00000522111 THUMPD2Q9BTF0 503 aaKnown RBP35.53■■■■□ 3.28
TRNP1-201ENST00000522111 PIP4K2BP78356 416 aa35.53■■■■□ 3.28
TRNP1-201ENST00000522111 AHDC1Q5TGY3 1603 aaPredicted RBP35.52■■■■□ 3.28
TRNP1-201ENST00000522111 COL18A1P39060 1754 aa35.51■■■■□ 3.28
TRNP1-201ENST00000522111 FAM83GA6ND36 823 aa35.51■■■■□ 3.27
TRNP1-201ENST00000522111 ERBB3P21860 1342 aa35.5■■■■□ 3.27
TRNP1-201ENST00000522111 MTHFSDQ2M296 383 aaKnown RBP35.49■■■■□ 3.27
TRNP1-201ENST00000522111 CPDO75976 1380 aa35.49■■■■□ 3.27
TRNP1-201ENST00000522111 TOM1O60784 492 aa35.48■■■■□ 3.27
TRNP1-201ENST00000522111 TSR2Q969E8 191 aaKnown RBP35.48■■■■□ 3.27
TRNP1-201ENST00000522111 MYH16Q9H6N6 1097 aa35.48■■■■□ 3.27
TRNP1-201ENST00000522111 DCTN1Q14203 1278 aa35.47■■■■□ 3.27
TRNP1-201ENST00000522111 LMOD3Q0VAK6 560 aa35.46■■■■□ 3.27
TRNP1-201ENST00000522111 PRDM11Q9NQV5 511 aa35.46■■■■□ 3.27
TRNP1-201ENST00000522111 RNF123Q5XPI4 1314 aa35.45■■■■□ 3.26
TRNP1-201ENST00000522111 LAS1LQ9Y4W2 734 aaKnown RBP35.44■■■■□ 3.26
TRNP1-201ENST00000522111 FANCIQ9NVI1 1328 aa35.44■■■■□ 3.26
TRNP1-201ENST00000522111 PHLPP1O60346 1717 aa35.43■■■■□ 3.26
TRNP1-201ENST00000522111 IL16Q14005 1332 aa35.43■■■■□ 3.26
TRNP1-201ENST00000522111 UBAP1LF5GYI3 381 aa35.43■■■■□ 3.26
TRNP1-201ENST00000522111 ABCC6O95255 1503 aa35.41■■■■□ 3.26
TRNP1-201ENST00000522111 CSB-PGBD3P0DP91 1061 aa35.41■■■■□ 3.26
TRNP1-201ENST00000522111 RRP1P56182 461 aaKnown RBP35.41■■■■□ 3.26
TRNP1-201ENST00000522111 CAMTA1Q9Y6Y1 1673 aa35.41■■■■□ 3.26
TRNP1-201ENST00000522111 MCM10Q7L590 875 aa35.4■■■■□ 3.26
TRNP1-201ENST00000522111 GAS2L2Q8NHY3 880 aa35.4■■■■□ 3.26
TRNP1-201ENST00000522111 NLRP2Q9NX02 1062 aa35.4■■■■□ 3.26
TRNP1-201ENST00000522111 NCAPD2Q15021 1401 aa35.37■■■■□ 3.25
TRNP1-201ENST00000522111 CALD1Q05682 793 aaKnown RBP35.37■■■■□ 3.25
TRNP1-201ENST00000522111 COL16A1Q07092 1604 aaPredicted RBP35.37■■■■□ 3.25
TRNP1-201ENST00000522111 LMO7Q8WWI1 1683 aa35.35■■■■□ 3.25
TRNP1-201ENST00000522111 PLIN1O60240 522 aa35.34■■■■□ 3.25
TRNP1-201ENST00000522111 RTF1Q92541 710 aaKnown RBP35.33■■■■□ 3.25
TRNP1-201ENST00000522111 EXOSC9Q06265 439 aaKnown RBP35.33■■■■□ 3.25
TRNP1-201ENST00000522111 FAM208AQ9UK61 1670 aaKnown RBP35.32■■■■□ 3.25
TRNP1-201ENST00000522111 IFT57Q9NWB7 429 aa35.31■■■■□ 3.24
TRNP1-201ENST00000522111 COL22A1Q8NFW1 1626 aaPredicted RBP35.3■■■■□ 3.24
TRNP1-201ENST00000522111 GNAI1P63096 354 aa35.3■■■■□ 3.24
TRNP1-201ENST00000522111 GNAT3A8MTJ3 354 aa35.29■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms