RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 EFCAB6Q5THR3 1501 aa5.88□□□□□ -1.47
PVT1-211ENST00000521600 MARF1Q9Y4F3 1742 aaKnown RBP5.88□□□□□ -1.47
PVT1-211ENST00000521600 FAM161AQ3B820 660 aa5.87□□□□□ -1.47
PVT1-211ENST00000521600 PADI6Q6TGC4 694 aa5.87□□□□□ -1.47
PVT1-211ENST00000521600 ERICH6Q7L0X2 663 aa5.87□□□□□ -1.47
PVT1-211ENST00000521600 C8orf37Q96NL8 207 aa5.87□□□□□ -1.47
PVT1-211ENST00000521600 LHX6Q9UPM6 363 aa5.87□□□□□ -1.47
PVT1-211ENST00000521600 ASXL1Q8IXJ9 1541 aa5.87□□□□□ -1.47
PVT1-211ENST00000521600 BCL9LQ86UU0 1499 aa5.86□□□□□ -1.47
PVT1-211ENST00000521600 SETD5Q9C0A6 1442 aa5.86□□□□□ -1.47
PVT1-211ENST00000521600 GIGYF2Q6Y7W6 1299 aaKnown RBP5.86□□□□□ -1.47
PVT1-211ENST00000521600 DDRGK1Q96HY6 314 aa5.86□□□□□ -1.47
PVT1-211ENST00000521600 REPIN1Q9BWE0 567 aaKnown RBP5.86□□□□□ -1.47
PVT1-211ENST00000521600 CEP350Q5VT06 3117 aa5.86□□□□□ -1.47
PVT1-211ENST00000521600 GCC2Q8IWJ2 1684 aa5.85□□□□□ -1.47
PVT1-211ENST00000521600 ARHGEF5Q12774 1597 aa5.85□□□□□ -1.47
PVT1-211ENST00000521600 ADGRB3O60242 1522 aa5.85□□□□□ -1.47
PVT1-211ENST00000521600 PLEKHG3A1L390 1219 aa5.85□□□□□ -1.47
PVT1-211ENST00000521600 MDM2Q00987 491 aaPredicted RBP5.85□□□□□ -1.47
PVT1-211ENST00000521600 BRINP3Q76B58 766 aa5.85□□□□□ -1.47
PVT1-211ENST00000521600 PHOX2BQ99453 314 aa5.85□□□□□ -1.47
PVT1-211ENST00000521600 EID1Q9Y6B2 187 aa5.85□□□□□ -1.47
PVT1-211ENST00000521600 ATRNO75882 1429 aa5.84□□□□□ -1.47
PVT1-211ENST00000521600 PNPLA6Q8IY17 1366 aa5.84□□□□□ -1.47
PVT1-211ENST00000521600 MS4A1P11836 297 aa5.84□□□□□ -1.47
PVT1-211ENST00000521600 PPP4R3BQ5MIZ7 849 aa5.84□□□□□ -1.47
PVT1-211ENST00000521600 IFFO2Q5TF58 517 aa5.84□□□□□ -1.47
PVT1-211ENST00000521600 DEFB132Q7Z7B7 95 aa5.84□□□□□ -1.47
PVT1-211ENST00000521600 NLRP7Q8WX94 980 aa5.84□□□□□ -1.47
PVT1-211ENST00000521600 ARHGAP31Q2M1Z3 1444 aa5.83□□□□□ -1.48
PVT1-211ENST00000521600 SPHKAPQ2M3C7 1700 aa5.83□□□□□ -1.48
PVT1-211ENST00000521600 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.83□□□□□ -1.48
PVT1-211ENST00000521600 SNPHO15079 494 aa5.83□□□□□ -1.48
PVT1-211ENST00000521600 CLCN1P35523 988 aa5.83□□□□□ -1.48
PVT1-211ENST00000521600 METTL3Q86U44 580 aaKnown RBP5.83□□□□□ -1.48
PVT1-211ENST00000521600 DDX17Q92841 729 aaKnown RBP5.83□□□□□ -1.48
PVT1-211ENST00000521600 GPCPD1Q9NPB8 672 aa5.83□□□□□ -1.48
PVT1-211ENST00000521600 LAMC1P11047 1609 aa5.83□□□□□ -1.48
PVT1-211ENST00000521600 GLI3P10071 1580 aa5.83□□□□□ -1.48
PVT1-211ENST00000521600 EHBP1L1Q8N3D4 1523 aa5.83□□□□□ -1.48
PVT1-211ENST00000521600 NALCNQ8IZF0 1738 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 CAMTA1Q9Y6Y1 1673 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 COL22A1Q8NFW1 1626 aaPredicted RBP5.82□□□□□ -1.48
PVT1-211ENST00000521600 PSDA5PKW4 1024 aaPredicted RBP5.82□□□□□ -1.48
PVT1-211ENST00000521600 OATP04181 439 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 HOXB1P14653 301 aaPredicted RBP5.82□□□□□ -1.48
PVT1-211ENST00000521600 PRSS12P56730 875 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 PXYLP1Q8TE99 480 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 CDCA7LQ96GN5 454 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 NGLY1Q96IV0 654 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 TMUB1Q9BVT8 246 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 RBM27Q9P2N5 1060 aaKnown RBP5.82□□□□□ -1.48
PVT1-211ENST00000521600 ADGRG1Q9Y653 693 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 XRN1Q8IZH2 1706 aaKnown RBP5.82□□□□□ -1.48
PVT1-211ENST00000521600 ZFYVE9O95405 1425 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 BLMP54132 1417 aaPredicted RBP5.82□□□□□ -1.48
PVT1-211ENST00000521600 MST1RQ04912 1400 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 NCOA3Q9Y6Q9 1424 aa5.82□□□□□ -1.48
PVT1-211ENST00000521600 UNC13BO14795 1591 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 ADAMTS2O95450 1211 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 COL9A1P20849 921 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 PTPREP23469 700 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 YY1P25490 414 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 SSTR3P32745 418 aaPredicted RBP5.81□□□□□ -1.48
PVT1-211ENST00000521600 IDI1Q13907 227 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 CCDC125Q86Z20 511 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 TTC13Q8NBP0 860 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 BCL2L12Q9HB09 334 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 TMEM131LA2VDJ0 1609 aa5.81□□□□□ -1.48
PVT1-211ENST00000521600 MTUS2Q5JR59 1369 aa5.8□□□□□ -1.48
PVT1-211ENST00000521600 TRPM2O94759 1503 aa5.8□□□□□ -1.48
PVT1-211ENST00000521600 CROCC2H7BZ55 1655 aa5.8□□□□□ -1.48
PVT1-211ENST00000521600 RBM46Q8TBY0 533 aaKnown RBP5.8□□□□□ -1.48
PVT1-211ENST00000521600 FAM198AQ9UFP1 575 aa5.8□□□□□ -1.48
PVT1-211ENST00000521600 USP21Q9UK80 565 aa5.8□□□□□ -1.48
PVT1-211ENST00000521600 ADAMTS13Q76LX8 1427 aa5.8□□□□□ -1.48
PVT1-211ENST00000521600 PTPRUQ92729 1446 aa5.8□□□□□ -1.48
PVT1-211ENST00000521600 RRBP1Q9P2E9 1410 aaKnown RBP5.8□□□□□ -1.48
PVT1-211ENST00000521600 PLEKHG1Q9ULL1 1385 aa5.8□□□□□ -1.48
PVT1-211ENST00000521600 TNS1Q9HBL0 1735 aaKnown RBP5.79□□□□□ -1.48
PVT1-211ENST00000521600 CLSPNQ9HAW4 1339 aa5.79□□□□□ -1.48
PVT1-211ENST00000521600 NRXN3Q9Y4C0 1643 aa5.79□□□□□ -1.48
PVT1-211ENST00000521600 OTUD5Q96G74 571 aa5.79□□□□□ -1.48
PVT1-211ENST00000521600 C19orf44Q9H6X5 657 aa5.79□□□□□ -1.48
PVT1-211ENST00000521600 TRPC5Q9UL62 973 aaPredicted RBP5.79□□□□□ -1.48
PVT1-211ENST00000521600 NOS1P29475 1434 aa5.79□□□□□ -1.48
PVT1-211ENST00000521600 DUOX2Q9NRD8 1548 aa5.79□□□□□ -1.48
PVT1-211ENST00000521600 CHD4Q14839 1912 aa5.78□□□□□ -1.48
PVT1-211ENST00000521600 PPP1R3GB7ZBB8 358 aa5.78□□□□□ -1.48
PVT1-211ENST00000521600 ATF3P18847 181 aa5.78□□□□□ -1.48
PVT1-211ENST00000521600 DCCP43146 1447 aa5.78□□□□□ -1.48
PVT1-211ENST00000521600 FNBP4Q8N3X1 1017 aaPredicted RBP5.78□□□□□ -1.48
PVT1-211ENST00000521600 LRRC59Q96AG4 307 aaKnown RBP5.78□□□□□ -1.48
PVT1-211ENST00000521600 BEGAINQ9BUH8 593 aa5.78□□□□□ -1.48
PVT1-211ENST00000521600 FAM217BQ9NTX9 383 aaPredicted RBP5.78□□□□□ -1.48
PVT1-211ENST00000521600 TSKSQ9UJT2 592 aa5.78□□□□□ -1.48
PVT1-211ENST00000521600 RGPD1P0DJD0 1748 aa5.77□□□□□ -1.49
PVT1-211ENST00000521600 PTCH1Q13635 1447 aa5.77□□□□□ -1.49
PVT1-211ENST00000521600 RIMS2Q9UQ26 1411 aa5.77□□□□□ -1.49
PVT1-211ENST00000521600 PNMA3Q9UL41 463 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms