RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 AKAP12Q02952 1782 aa13.08□□□□□ -0.32
MRPS28-207ENST00000521434 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
MRPS28-207ENST00000521434 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
MRPS28-207ENST00000521434 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
MRPS28-207ENST00000521434 CCDC61Q9Y6R9 512 aa13.08□□□□□ -0.32
MRPS28-207ENST00000521434 WNK3Q9BYP7 1800 aa13.07□□□□□ -0.32
MRPS28-207ENST00000521434 PLEKHG3A1L390 1219 aa13.07□□□□□ -0.32
MRPS28-207ENST00000521434 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
MRPS28-207ENST00000521434 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
MRPS28-207ENST00000521434 STAC3Q96MF2 364 aa13.07□□□□□ -0.32
MRPS28-207ENST00000521434 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
MRPS28-207ENST00000521434 PDGFDQ9GZP0 370 aaPredicted RBP13.07□□□□□ -0.32
MRPS28-207ENST00000521434 CEP350Q5VT06 3117 aa13.06□□□□□ -0.32
MRPS28-207ENST00000521434 GCP02774 474 aa13.06□□□□□ -0.32
MRPS28-207ENST00000521434 PTGER2P43116 358 aa13.06□□□□□ -0.32
MRPS28-207ENST00000521434 NLRP13Q86W25 1043 aa13.06□□□□□ -0.32
MRPS28-207ENST00000521434 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
MRPS28-207ENST00000521434 DDB1Q16531 1140 aa13.05□□□□□ -0.32
MRPS28-207ENST00000521434 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
MRPS28-207ENST00000521434 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
MRPS28-207ENST00000521434 PROM2Q8N271 834 aa13.04□□□□□ -0.32
MRPS28-207ENST00000521434 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-207ENST00000521434 C1QTNF8P60827 252 aa13.03□□□□□ -0.32
MRPS28-207ENST00000521434 SYT17Q9BSW7 474 aa13.03□□□□□ -0.32
MRPS28-207ENST00000521434 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-207ENST00000521434 BCL9O00512 1426 aa13.03□□□□□ -0.32
MRPS28-207ENST00000521434 STK32BQ9NY57 414 aa13.02□□□□□ -0.33
MRPS28-207ENST00000521434 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.33
MRPS28-207ENST00000521434 COL18A1P39060 1754 aa13.02□□□□□ -0.33
MRPS28-207ENST00000521434 ZBTB7CA1YPR0 619 aa13.01□□□□□ -0.33
MRPS28-207ENST00000521434 TOM1L2Q6ZVM7 507 aa13.01□□□□□ -0.33
MRPS28-207ENST00000521434 MARCH10Q8NA82 808 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-207ENST00000521434 BRD4O60885 1362 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-207ENST00000521434 RGPD5Q99666 1765 aa13.01□□□□□ -0.33
MRPS28-207ENST00000521434 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
MRPS28-207ENST00000521434 PPIP5K1Q6PFW1 1433 aa13□□□□□ -0.33
MRPS28-207ENST00000521434 DSG3P32926 999 aa13□□□□□ -0.33
MRPS28-207ENST00000521434 SLC15A2Q16348 729 aa13□□□□□ -0.33
MRPS28-207ENST00000521434 TXNRD1Q16881 649 aa13□□□□□ -0.33
MRPS28-207ENST00000521434 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
MRPS28-207ENST00000521434 MTFR1LQ9H019 292 aa13□□□□□ -0.33
MRPS28-207ENST00000521434 KAT6BQ8WYB5 2073 aa13□□□□□ -0.33
MRPS28-207ENST00000521434 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
MRPS28-207ENST00000521434 SLIT3O75094 1523 aa12.99□□□□□ -0.33
MRPS28-207ENST00000521434 WDR17Q8IZU2 1322 aa12.99□□□□□ -0.33
MRPS28-207ENST00000521434 CAPN15O75808 1086 aa12.99□□□□□ -0.33
MRPS28-207ENST00000521434 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
MRPS28-207ENST00000521434 SGIP1Q9BQI5 828 aa12.99□□□□□ -0.33
MRPS28-207ENST00000521434 NLRP6P59044 892 aa12.98□□□□□ -0.33
MRPS28-207ENST00000521434 RAB3GAP2Q9H2M9 1393 aa12.97□□□□□ -0.33
MRPS28-207ENST00000521434 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
MRPS28-207ENST00000521434 USP6P35125 1406 aa12.96□□□□□ -0.33
MRPS28-207ENST00000521434 MAP3K5Q99683 1374 aa12.96□□□□□ -0.33
MRPS28-207ENST00000521434 PIK3C2AO00443 1686 aa12.96□□□□□ -0.33
MRPS28-207ENST00000521434 ARXQ96QS3 562 aa12.96□□□□□ -0.33
MRPS28-207ENST00000521434 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.33
MRPS28-207ENST00000521434 NHSQ6T4R5 1651 aa12.96□□□□□ -0.34
MRPS28-207ENST00000521434 CARD10Q9BWT7 1032 aa12.95□□□□□ -0.34
MRPS28-207ENST00000521434 QRICH2Q9H0J4 1663 aa12.95□□□□□ -0.34
MRPS28-207ENST00000521434 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
MRPS28-207ENST00000521434 EXOC5O00471 708 aa12.94□□□□□ -0.34
MRPS28-207ENST00000521434 CABP2Q9NPB3 220 aa12.94□□□□□ -0.34
MRPS28-207ENST00000521434 PAPPAQ13219 1627 aa12.94□□□□□ -0.34
MRPS28-207ENST00000521434 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-207ENST00000521434 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-207ENST00000521434 BTAF1O14981 1849 aa12.92□□□□□ -0.34
MRPS28-207ENST00000521434 TRPM1Q7Z4N2 1603 aa12.92□□□□□ -0.34
MRPS28-207ENST00000521434 CSB-PGBD3P0DP91 1061 aa12.92□□□□□ -0.34
MRPS28-207ENST00000521434 GPR162Q16538 588 aa12.92□□□□□ -0.34
MRPS28-207ENST00000521434 TNS2Q63HR2 1409 aa12.92□□□□□ -0.34
MRPS28-207ENST00000521434 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
MRPS28-207ENST00000521434 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
MRPS28-207ENST00000521434 CENPJQ9HC77 1338 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-207ENST00000521434 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
MRPS28-207ENST00000521434 KCNH5Q8NCM2 988 aa12.91□□□□□ -0.34
MRPS28-207ENST00000521434 CCDC7Q96M83 1385 aa12.91□□□□□ -0.34
MRPS28-207ENST00000521434 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
MRPS28-207ENST00000521434 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
MRPS28-207ENST00000521434 ABCC6O95255 1503 aa12.89□□□□□ -0.35
MRPS28-207ENST00000521434 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
MRPS28-207ENST00000521434 ZNF827Q17R98 1081 aa12.88□□□□□ -0.35
MRPS28-207ENST00000521434 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
MRPS28-207ENST00000521434 NFAT5O94916 1531 aa12.88□□□□□ -0.35
MRPS28-207ENST00000521434 SOX12O15370 315 aa12.87□□□□□ -0.35
MRPS28-207ENST00000521434 SLC16A10Q8TF71 515 aa12.87□□□□□ -0.35
MRPS28-207ENST00000521434 TTC21BQ7Z4L5 1316 aa12.87□□□□□ -0.35
MRPS28-207ENST00000521434 TUBGCP6Q96RT7 1819 aa12.86□□□□□ -0.35
MRPS28-207ENST00000521434 POLD1P28340 1107 aa12.86□□□□□ -0.35
MRPS28-207ENST00000521434 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
MRPS28-207ENST00000521434 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
MRPS28-207ENST00000521434 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-207ENST00000521434 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
MRPS28-207ENST00000521434 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
MRPS28-207ENST00000521434 LTN1O94822 1766 aa12.84□□□□□ -0.35
MRPS28-207ENST00000521434 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
MRPS28-207ENST00000521434 EVC2Q86UK5 1308 aa12.84□□□□□ -0.35
MRPS28-207ENST00000521434 IL2RBP14784 551 aa12.83□□□□□ -0.36
MRPS28-207ENST00000521434 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.36
MRPS28-207ENST00000521434 ERBB3P21860 1342 aa12.83□□□□□ -0.36
MRPS28-207ENST00000521434 NLGN2Q8NFZ4 835 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms