RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 CPS1P31327 1500 aa10.16□□□□□ -0.78
SPIDR-213ENST00000521214 AEBP2Q6ZN18 517 aaPredicted RBP10.16□□□□□ -0.78
SPIDR-213ENST00000521214 NLRP2Q9NX02 1062 aa10.16□□□□□ -0.78
SPIDR-213ENST00000521214 EXOSC9Q06265 439 aaKnown RBP10.16□□□□□ -0.78
SPIDR-213ENST00000521214 TMPOP42166 694 aaKnown RBP10.16□□□□□ -0.78
SPIDR-213ENST00000521214 COG6Q9Y2V7 657 aa10.16□□□□□ -0.78
SPIDR-213ENST00000521214 MYOM1P52179 1685 aa10.16□□□□□ -0.78
SPIDR-213ENST00000521214 SETBP1Q9Y6X0 1596 aa10.15□□□□□ -0.78
SPIDR-213ENST00000521214 ADAMTS2O95450 1211 aa10.15□□□□□ -0.79
SPIDR-213ENST00000521214 NFKBIBQ15653 356 aa10.15□□□□□ -0.79
SPIDR-213ENST00000521214 C19orf44Q9H6X5 657 aa10.15□□□□□ -0.79
SPIDR-213ENST00000521214 NRXN3Q9Y4C0 1643 aa10.14□□□□□ -0.79
SPIDR-213ENST00000521214 RRP1P56182 461 aaKnown RBP10.14□□□□□ -0.79
SPIDR-213ENST00000521214 CD163L1Q9NR16 1453 aa10.14□□□□□ -0.79
SPIDR-213ENST00000521214 MYO3AQ8NEV4 1616 aa10.14□□□□□ -0.79
SPIDR-213ENST00000521214 DUSP27Q5VZP5 1158 aa10.14□□□□□ -0.79
SPIDR-213ENST00000521214 NKTRP30414 1462 aaKnown RBP10.13□□□□□ -0.79
SPIDR-213ENST00000521214 SMC4Q9NTJ3 1288 aa10.13□□□□□ -0.79
SPIDR-213ENST00000521214 RGS3P49796 1198 aa10.13□□□□□ -0.79
SPIDR-213ENST00000521214 GOLGB1Q14789 3259 aaKnown RBP10.12□□□□□ -0.79
SPIDR-213ENST00000521214 ATP7BP35670 1465 aa10.12□□□□□ -0.79
SPIDR-213ENST00000521214 DDRGK1Q96HY6 314 aa10.12□□□□□ -0.79
SPIDR-213ENST00000521214 EYA1Q99502 592 aa10.12□□□□□ -0.79
SPIDR-213ENST00000521214 CCDC9Q9Y3X0 531 aaKnown RBP10.12□□□□□ -0.79
SPIDR-213ENST00000521214 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.12□□□□□ -0.79
SPIDR-213ENST00000521214 KIAA1210Q9ULL0 1709 aa10.12□□□□□ -0.79
SPIDR-213ENST00000521214 GCP02774 474 aa10.11□□□□□ -0.79
SPIDR-213ENST00000521214 SLFN5Q08AF3 891 aa10.11□□□□□ -0.79
SPIDR-213ENST00000521214 SRCAPQ6ZRS2 3230 aa10.11□□□□□ -0.79
SPIDR-213ENST00000521214 RGPD8O14715 1765 aaPredicted RBP10.11□□□□□ -0.79
SPIDR-213ENST00000521214 PLEKHG3A1L390 1219 aa10.11□□□□□ -0.79
SPIDR-213ENST00000521214 TSPYL6Q8N831 410 aa10.11□□□□□ -0.79
SPIDR-213ENST00000521214 APBB1O00213 710 aa10.11□□□□□ -0.79
SPIDR-213ENST00000521214 NGEFQ8N5V2 710 aa10.11□□□□□ -0.79
SPIDR-213ENST00000521214 RTF1Q92541 710 aaKnown RBP10.11□□□□□ -0.79
SPIDR-213ENST00000521214 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
SPIDR-213ENST00000521214 IL13P35225 146 aa10.1□□□□□ -0.79
SPIDR-213ENST00000521214 MPRIPQ6WCQ1 1025 aa10.1□□□□□ -0.79
SPIDR-213ENST00000521214 EIF2S2P20042 333 aaKnown RBP10.1□□□□□ -0.79
SPIDR-213ENST00000521214 SLC4A3P48751 1232 aa10.1□□□□□ -0.79
SPIDR-213ENST00000521214 ZNF330Q9Y3S2 320 aaPredicted RBP10.1□□□□□ -0.79
SPIDR-213ENST00000521214 USP6P35125 1406 aa10.1□□□□□ -0.79
SPIDR-213ENST00000521214 PRDM11Q9NQV5 511 aa10.1□□□□□ -0.79
SPIDR-213ENST00000521214 EDC4Q6P2E9 1401 aaKnown RBP10.1□□□□□ -0.79
SPIDR-213ENST00000521214 FTSJ3Q8IY81 847 aaKnown RBP10.09□□□□□ -0.79
SPIDR-213ENST00000521214 SLAIN2Q9P270 581 aa10.09□□□□□ -0.79
SPIDR-213ENST00000521214 TRIM35Q9UPQ4 493 aa10.09□□□□□ -0.79
SPIDR-213ENST00000521214 E9PSI1 815 aa10.09□□□□□ -0.79
SPIDR-213ENST00000521214 ANXA1P04083 346 aa10.09□□□□□ -0.79
SPIDR-213ENST00000521214 PIP4K2AP48426 406 aaPredicted RBP10.09□□□□□ -0.79
SPIDR-213ENST00000521214 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
SPIDR-213ENST00000521214 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
SPIDR-213ENST00000521214 POLR3AO14802 1390 aaPredicted RBP10.09□□□□□ -0.79
SPIDR-213ENST00000521214 HOXC9P31274 260 aa10.09□□□□□ -0.79
SPIDR-213ENST00000521214 MTHFSDQ2M296 383 aaKnown RBP10.09□□□□□ -0.79
SPIDR-213ENST00000521214 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
SPIDR-213ENST00000521214 FAM135BQ49AJ0 1406 aa10.08□□□□□ -0.8
SPIDR-213ENST00000521214 SLC4A10Q6U841 1118 aa10.08□□□□□ -0.8
SPIDR-213ENST00000521214 DDX54Q8TDD1 881 aaKnown RBP10.08□□□□□ -0.8
SPIDR-213ENST00000521214 RRAGDQ9NQL2 400 aaPredicted RBP10.08□□□□□ -0.8
SPIDR-213ENST00000521214 MSH6P52701 1360 aa10.08□□□□□ -0.8
SPIDR-213ENST00000521214 CADPS2Q86UW7 1296 aa10.08□□□□□ -0.8
SPIDR-213ENST00000521214 ITPRIPQ8IWB1 547 aa10.08□□□□□ -0.8
SPIDR-213ENST00000521214 ARHGAP23Q9P227 1491 aa10.07□□□□□ -0.8
SPIDR-213ENST00000521214 EVA1CP58658 441 aa10.07□□□□□ -0.8
SPIDR-213ENST00000521214 ARID3AQ99856 593 aa10.07□□□□□ -0.8
SPIDR-213ENST00000521214 BBXQ8WY36 941 aaPredicted RBP10.07□□□□□ -0.8
SPIDR-213ENST00000521214 SMG6Q86US8 1419 aaKnown RBP10.07□□□□□ -0.8
SPIDR-213ENST00000521214 FCHSD2O94868 740 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 DIP2AQ14689 1571 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 ANKRD24Q8TF21 1146 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 SYTL4Q96C24 671 aaPredicted RBP10.06□□□□□ -0.8
SPIDR-213ENST00000521214 NFE2L2Q16236 605 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 BRINP3Q76B58 766 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 CPSF1Q10570 1443 aaKnown RBP10.06□□□□□ -0.8
SPIDR-213ENST00000521214 RLBP1P12271 317 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 TOM1L2Q6ZVM7 507 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 C8orf58Q8NAV2 365 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 SSH1Q8WYL5 1049 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 PLEKHF1Q96S99 279 aa10.06□□□□□ -0.8
SPIDR-213ENST00000521214 SLIT1O75093 1534 aa10.05□□□□□ -0.8
SPIDR-213ENST00000521214 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
SPIDR-213ENST00000521214 TSPYL4Q9UJ04 414 aa10.05□□□□□ -0.8
SPIDR-213ENST00000521214 PDE3BQ13370 1112 aa10.05□□□□□ -0.8
SPIDR-213ENST00000521214 ZNF530Q6P9A1 599 aaPredicted RBP10.05□□□□□ -0.8
SPIDR-213ENST00000521214 LGR6Q9HBX8 967 aa10.05□□□□□ -0.8
SPIDR-213ENST00000521214 MBIPQ9NS73 344 aa10.05□□□□□ -0.8
SPIDR-213ENST00000521214 NINLQ9Y2I6 1382 aa10.05□□□□□ -0.8
SPIDR-213ENST00000521214 PDE4AP27815 886 aa10.05□□□□□ -0.8
SPIDR-213ENST00000521214 PUS7Q96PZ0 661 aaKnown RBP10.05□□□□□ -0.8
SPIDR-213ENST00000521214 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
SPIDR-213ENST00000521214 MAP2P11137 1827 aaKnown RBP10.04□□□□□ -0.8
SPIDR-213ENST00000521214 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
SPIDR-213ENST00000521214 SLC39A6Q13433 755 aa10.04□□□□□ -0.8
SPIDR-213ENST00000521214 L1TD1Q5T7N2 865 aaKnown RBP10.04□□□□□ -0.8
SPIDR-213ENST00000521214 SIRT1Q96EB6 747 aa10.04□□□□□ -0.8
SPIDR-213ENST00000521214 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
SPIDR-213ENST00000521214 NSD2O96028 1365 aa10.04□□□□□ -0.8
SPIDR-213ENST00000521214 UBAP1LF5GYI3 381 aa10.04□□□□□ -0.8
SPIDR-213ENST00000521214 BLMP54132 1417 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 296.4 ms