RNA–Protein interactions for RNA: ENST00000520934.1

MCM4-210, Transcript of minichromosome maintenance complex component 4, human

TSL 3

Gene MCM4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCM4-210	ENST00000520934	MAP3K19	Q56UN5	1328 aa		32.36	■■■□□ 2.77
MCM4-210	ENST00000520934	TRPC5	Q9UL62	973 aa	Predicted RBP	32.36	■■■□□ 2.77
MCM4-210	ENST00000520934	QTRT2	Q9H974	415 aa	Known RBP	32.35	■■■□□ 2.77
MCM4-210	ENST00000520934	TNNT2	P45379	298 aa	Predicted RBP	32.34	■■■□□ 2.77
MCM4-210	ENST00000520934	AMPH	P49418	695 aa		32.34	■■■□□ 2.77
MCM4-210	ENST00000520934	EVA1C	P58658	441 aa		32.34	■■■□□ 2.77
MCM4-210	ENST00000520934	RRS1	Q15050	365 aa	Known RBP	32.34	■■■□□ 2.77
MCM4-210	ENST00000520934	IP6K1	Q92551	441 aa		32.32	■■■□□ 2.76
MCM4-210	ENST00000520934	AXIN2	Q9Y2T1	843 aa		32.32	■■■□□ 2.76
MCM4-210	ENST00000520934	ATRN	O75882	1429 aa		32.32	■■■□□ 2.76
MCM4-210	ENST00000520934	CNGB1	Q14028	1251 aa	Predicted RBP	32.31	■■■□□ 2.76
MCM4-210	ENST00000520934	POTEA	Q6S8J7	498 aa		32.31	■■■□□ 2.76
MCM4-210	ENST00000520934	STRN4	Q9NRL3	753 aa		32.31	■■■□□ 2.76
MCM4-210	ENST00000520934	RTL1	A6NKG5	1358 aa		32.31	■■■□□ 2.76
MCM4-210	ENST00000520934	VPS72	Q15906	364 aa		32.3	■■■□□ 2.76
MCM4-210	ENST00000520934	KIF24	Q5T7B8	1368 aa		32.3	■■■□□ 2.76
MCM4-210	ENST00000520934	COL5A2	P05997	1499 aa	Predicted RBP	32.29	■■■□□ 2.76
MCM4-210	ENST00000520934	BLM	P54132	1417 aa	Predicted RBP	32.28	■■■□□ 2.76
MCM4-210	ENST00000520934	HOXC9	P31274	260 aa		32.28	■■■□□ 2.76
MCM4-210	ENST00000520934	CCDC9	Q9Y3X0	531 aa	Known RBP	32.27	■■■□□ 2.76
MCM4-210	ENST00000520934	PEAK1	Q9H792	1746 aa		32.26	■■■□□ 2.76
MCM4-210	ENST00000520934	POLK	Q9UBT6	870 aa		32.26	■■■□□ 2.75
MCM4-210	ENST00000520934	EMILIN1	Q9Y6C2	1016 aa		32.26	■■■□□ 2.75
MCM4-210	ENST00000520934	FLT4	P35916	1363 aa		32.25	■■■□□ 2.75
MCM4-210	ENST00000520934	PPM1G	O15355	546 aa	Predicted RBP	32.24	■■■□□ 2.75
MCM4-210	ENST00000520934	RBM6	P78332	1123 aa	Known RBP	32.24	■■■□□ 2.75
MCM4-210	ENST00000520934	GJD4	Q96KN9	370 aa	Predicted RBP	32.24	■■■□□ 2.75
MCM4-210	ENST00000520934	RXRB	P28702	533 aa		32.23	■■■□□ 2.75
MCM4-210	ENST00000520934	WDR17	Q8IZU2	1322 aa		32.23	■■■□□ 2.75
MCM4-210	ENST00000520934	CSB-PGBD3	P0DP91	1061 aa		32.22	■■■□□ 2.75
MCM4-210	ENST00000520934	LARP1	Q6PKG0	1096 aa	Known RBP	32.22	■■■□□ 2.75
MCM4-210	ENST00000520934	ANKRD24	Q8TF21	1146 aa		32.21	■■■□□ 2.75
MCM4-210	ENST00000520934	SPATA31A5	Q5VU36	1347 aa		32.21	■■■□□ 2.75
MCM4-210	ENST00000520934	SPATA31A7	Q8IWB4	1347 aa		32.21	■■■□□ 2.75
MCM4-210	ENST00000520934	ERBB3	P21860	1342 aa		32.2	■■■□□ 2.74
MCM4-210	ENST00000520934	INSR	P06213	1382 aa		32.19	■■■□□ 2.74
MCM4-210	ENST00000520934	CRB1	P82279	1406 aa		32.19	■■■□□ 2.74
MCM4-210	ENST00000520934	SMG6	Q86US8	1419 aa	Known RBP	32.19	■■■□□ 2.74
MCM4-210	ENST00000520934	FAM208A	Q9UK61	1670 aa	Known RBP	32.19	■■■□□ 2.74
MCM4-210	ENST00000520934	TOM1L2	Q6ZVM7	507 aa		32.19	■■■□□ 2.74
MCM4-210	ENST00000520934	GLI3	P10071	1580 aa		32.19	■■■□□ 2.74
MCM4-210	ENST00000520934	HSP90AB2P	Q58FF8	381 aa		32.18	■■■□□ 2.74
MCM4-210	ENST00000520934	LTV1	Q96GA3	475 aa	Predicted RBP	32.18	■■■□□ 2.74
MCM4-210	ENST00000520934	SPATA31A1	Q5TZJ5	1347 aa		32.17	■■■□□ 2.74
MCM4-210	ENST00000520934	MTHFS	P49914	203 aa		32.13	■■■□□ 2.73
MCM4-210	ENST00000520934	PARD3	Q8TEW0	1356 aa		32.13	■■■□□ 2.73
MCM4-210	ENST00000520934	CARD10	Q9BWT7	1032 aa		32.13	■■■□□ 2.73
MCM4-210	ENST00000520934	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.13	■■■□□ 2.73
MCM4-210	ENST00000520934	USP35	Q9P2H5	1018 aa		32.13	■■■□□ 2.73
MCM4-210	ENST00000520934	RGPD2	P0DJD1	1756 aa		32.12	■■■□□ 2.73
MCM4-210	ENST00000520934	RALBP1	Q15311	655 aa		32.12	■■■□□ 2.73
MCM4-210	ENST00000520934	NLRP2	Q9NX02	1062 aa		32.12	■■■□□ 2.73
MCM4-210	ENST00000520934	TCP11L2	Q8N4U5	519 aa		32.11	■■■□□ 2.73
MCM4-210	ENST00000520934	THRAP3	Q9Y2W1	955 aa	Known RBP	32.11	■■■□□ 2.73
MCM4-210	ENST00000520934	PPP2R1A	P30153	589 aa		32.09	■■■□□ 2.73
MCM4-210	ENST00000520934	ONECUT3	O60422	494 aa	Predicted RBP	32.07	■■■□□ 2.72
MCM4-210	ENST00000520934	FAM98C	Q17RN3	349 aa	Known RBP	32.07	■■■□□ 2.72
MCM4-210	ENST00000520934	BARGIN	Q6ZT62	677 aa		32.07	■■■□□ 2.72
MCM4-210	ENST00000520934	WNK3	Q9BYP7	1800 aa		32.05	■■■□□ 2.72
MCM4-210	ENST00000520934	EIF4A2	Q14240	407 aa	Known RBP	32.04	■■■□□ 2.72
MCM4-210	ENST00000520934	RGS12	O14924	1447 aa		32.02	■■■□□ 2.72
MCM4-210	ENST00000520934		A0A0G2JS52	829 aa		32.02	■■■□□ 2.72
MCM4-210	ENST00000520934	MYT1	Q01538	1121 aa		32.02	■■■□□ 2.72
MCM4-210	ENST00000520934	NBPF6	Q5VWK0	638 aa		32.02	■■■□□ 2.72
MCM4-210	ENST00000520934	NBPF4	Q96M43	638 aa		32.02	■■■□□ 2.72
MCM4-210	ENST00000520934	CFAP53	Q96M91	514 aa		32.01	■■■□□ 2.71
MCM4-210	ENST00000520934	THSD7A	Q9UPZ6	1657 aa		32.01	■■■□□ 2.71
MCM4-210	ENST00000520934	SEPT12	Q8IYM1	358 aa		32	■■■□□ 2.71
MCM4-210	ENST00000520934	CDCA7	Q9BWT1	371 aa	Predicted RBP	32	■■■□□ 2.71
MCM4-210	ENST00000520934	PRKRIP1	Q9H875	184 aa	Predicted RBP	32	■■■□□ 2.71
MCM4-210	ENST00000520934	BRWD3	Q6RI45	1802 aa		31.99	■■■□□ 2.71
MCM4-210	ENST00000520934	PARP4	Q9UKK3	1724 aa	Known RBP	31.97	■■■□□ 2.71
MCM4-210	ENST00000520934	EYA1	Q99502	592 aa		31.97	■■■□□ 2.71
MCM4-210	ENST00000520934	MYBBP1A	Q9BQG0	1328 aa	Known RBP	31.97	■■■□□ 2.71
MCM4-210	ENST00000520934	DIAPH1	O60610	1272 aa	Known RBP	31.96	■■■□□ 2.71
MCM4-210	ENST00000520934	IL13	P35225	146 aa		31.96	■■■□□ 2.71
MCM4-210	ENST00000520934	ILDR2	Q71H61	639 aa		31.96	■■■□□ 2.71
MCM4-210	ENST00000520934	USHBP1	Q8N6Y0	703 aa		31.95	■■■□□ 2.71
MCM4-210	ENST00000520934	IL2RB	P14784	551 aa		31.94	■■■□□ 2.7
MCM4-210	ENST00000520934	COL3A1	P02461	1466 aa	Predicted RBP	31.94	■■■□□ 2.7
MCM4-210	ENST00000520934	DISP2	A7MBM2	1401 aa		31.93	■■■□□ 2.7
MCM4-210	ENST00000520934	ANP32C	O43423	234 aa		31.93	■■■□□ 2.7
MCM4-210	ENST00000520934	RGPD1	P0DJD0	1748 aa		31.92	■■■□□ 2.7
MCM4-210	ENST00000520934	NCAPD2	Q15021	1401 aa		31.92	■■■□□ 2.7
MCM4-210	ENST00000520934	IGSF1	Q8N6C5	1336 aa		31.91	■■■□□ 2.7
MCM4-210	ENST00000520934	DDB1	Q16531	1140 aa		31.89	■■■□□ 2.7
MCM4-210	ENST00000520934	RAPGEF4	Q8WZA2	1011 aa		31.89	■■■□□ 2.7
MCM4-210	ENST00000520934	LRRC37A3	O60309	1634 aa		31.89	■■■□□ 2.7
MCM4-210	ENST00000520934	KRT27	Q7Z3Y8	459 aa		31.87	■■■□□ 2.69
MCM4-210	ENST00000520934	NUDC	Q9Y266	331 aa		31.87	■■■□□ 2.69
MCM4-210	ENST00000520934	EXOC5	O00471	708 aa		31.86	■■■□□ 2.69
MCM4-210	ENST00000520934	TAT	P17735	454 aa	Predicted RBP	31.86	■■■□□ 2.69
MCM4-210	ENST00000520934	PDE3B	Q13370	1112 aa		31.86	■■■□□ 2.69
MCM4-210	ENST00000520934	MEGF6	O75095	1541 aa		31.84	■■■□□ 2.69
MCM4-210	ENST00000520934	U2SURP	O15042	1029 aa	Known RBP	31.83	■■■□□ 2.69
MCM4-210	ENST00000520934	SULT6B1	Q6IMI4	303 aa		31.82	■■■□□ 2.68
MCM4-210	ENST00000520934	OVOS2	A0A0G2JMS6	1433 aa		31.82	■■■□□ 2.68
MCM4-210	ENST00000520934	TNS2	Q63HR2	1409 aa		31.82	■■■□□ 2.68
MCM4-210	ENST00000520934	KDR	P35968	1356 aa		31.8	■■■□□ 2.68
MCM4-210	ENST00000520934	AEBP1	Q8IUX7	1158 aa		31.78	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms