RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SOX12O15370 315 aa27.89■■■□□ 2.06
PABPC1-215ENST00000520804 CD163L1Q9NR16 1453 aa27.88■■■□□ 2.05
PABPC1-215ENST00000520804 R3HDM1Q15032 1099 aaKnown RBP27.87■■■□□ 2.05
PABPC1-215ENST00000520804 LRRC37A3O60309 1634 aa27.87■■■□□ 2.05
PABPC1-215ENST00000520804 RGPD5Q99666 1765 aa27.86■■■□□ 2.05
PABPC1-215ENST00000520804 C11orf95C9JLR9 678 aaPredicted RBP27.86■■■□□ 2.05
PABPC1-215ENST00000520804 USP31Q70CQ4 1352 aa27.86■■■□□ 2.05
PABPC1-215ENST00000520804 PEAK1Q9H792 1746 aa27.85■■■□□ 2.05
PABPC1-215ENST00000520804 TMC1Q8TDI8 760 aa27.85■■■□□ 2.05
PABPC1-215ENST00000520804 WNK3Q9BYP7 1800 aa27.85■■■□□ 2.05
PABPC1-215ENST00000520804 RREB1Q92766 1687 aa27.84■■■□□ 2.05
PABPC1-215ENST00000520804 OVOS2A0A0G2JMS6 1433 aa27.84■■■□□ 2.05
PABPC1-215ENST00000520804 OVOS2A0A0J9YW53 1432 aa27.84■■■□□ 2.05
PABPC1-215ENST00000520804 OVOS2Q6IE36 1432 aa27.84■■■□□ 2.05
PABPC1-215ENST00000520804 DDB1Q16531 1140 aa27.84■■■□□ 2.05
PABPC1-215ENST00000520804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.84■■■□□ 2.05
PABPC1-215ENST00000520804 USP54Q70EL1 1684 aa27.84■■■□□ 2.05
PABPC1-215ENST00000520804 ABCC6O95255 1503 aa27.82■■■□□ 2.04
PABPC1-215ENST00000520804 HDGFL2Q7Z4V5 671 aaPredicted RBP27.82■■■□□ 2.04
PABPC1-215ENST00000520804 CARD10Q9BWT7 1032 aa27.82■■■□□ 2.04
PABPC1-215ENST00000520804 SLC12A5Q9H2X9 1139 aa27.82■■■□□ 2.04
PABPC1-215ENST00000520804 CSB-PGBD3P0DP91 1061 aa27.81■■■□□ 2.04
PABPC1-215ENST00000520804 PUS7Q96PZ0 661 aaKnown RBP27.81■■■□□ 2.04
PABPC1-215ENST00000520804 CDCA7Q9BWT1 371 aaPredicted RBP27.81■■■□□ 2.04
PABPC1-215ENST00000520804 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
PABPC1-215ENST00000520804 NME9Q86XW9 330 aa27.8■■■□□ 2.04
PABPC1-215ENST00000520804 NUP188Q5SRE5 1749 aa27.8■■■□□ 2.04
PABPC1-215ENST00000520804 EDC4Q6P2E9 1401 aaKnown RBP27.78■■■□□ 2.04
PABPC1-215ENST00000520804 SBF2Q86WG5 1849 aa27.78■■■□□ 2.04
PABPC1-215ENST00000520804 TERF2IPQ9NYB0 399 aa27.77■■■□□ 2.04
PABPC1-215ENST00000520804 A0A1W2PP64 1363 aa27.76■■■□□ 2.03
PABPC1-215ENST00000520804 TESK2Q96S53 571 aa27.76■■■□□ 2.03
PABPC1-215ENST00000520804 CCDC7Q96M83 1385 aa27.75■■■□□ 2.03
PABPC1-215ENST00000520804 MARCH10Q8NA82 808 aaPredicted RBP27.75■■■□□ 2.03
PABPC1-215ENST00000520804 ST20-MTHFSA0A0A6YYL1 179 aa27.74■■■□□ 2.03
PABPC1-215ENST00000520804 NBPF14Q5TI25 921 aa27.74■■■□□ 2.03
PABPC1-215ENST00000520804 BCL9O00512 1426 aa27.74■■■□□ 2.03
PABPC1-215ENST00000520804 LTN1O94822 1766 aa27.73■■■□□ 2.03
PABPC1-215ENST00000520804 RGPD3A6NKT7 1758 aaPredicted RBP27.72■■■□□ 2.03
PABPC1-215ENST00000520804 RGPD4Q7Z3J3 1758 aa27.72■■■□□ 2.03
PABPC1-215ENST00000520804 PLSCR1O15162 318 aa27.71■■■□□ 2.03
PABPC1-215ENST00000520804 BCL11BQ9C0K0 894 aaPredicted RBP27.71■■■□□ 2.03
PABPC1-215ENST00000520804 NINLQ9Y2I6 1382 aa27.71■■■□□ 2.03
PABPC1-215ENST00000520804 ERBB3P21860 1342 aa27.7■■■□□ 2.03
PABPC1-215ENST00000520804 EXOC5O00471 708 aa27.7■■■□□ 2.02
PABPC1-215ENST00000520804 SLC24A1O60721 1099 aa27.7■■■□□ 2.02
PABPC1-215ENST00000520804 PTF1AQ7RTS3 328 aa27.68■■■□□ 2.02
PABPC1-215ENST00000520804 TNS2Q63HR2 1409 aa27.67■■■□□ 2.02
PABPC1-215ENST00000520804 NLRP2Q9NX02 1062 aa27.65■■■□□ 2.02
PABPC1-215ENST00000520804 ANKRD24Q8TF21 1146 aa27.64■■■□□ 2.02
PABPC1-215ENST00000520804 IL2RBP14784 551 aa27.6■■■□□ 2.01
PABPC1-215ENST00000520804 USP47Q96K76 1375 aa27.6■■■□□ 2.01
PABPC1-215ENST00000520804 PROM2Q8N271 834 aa27.59■■■□□ 2.01
PABPC1-215ENST00000520804 IP6K1Q92551 441 aa27.59■■■□□ 2.01
PABPC1-215ENST00000520804 ANKRD36BQ8N2N9 1353 aa27.59■■■□□ 2.01
PABPC1-215ENST00000520804 COG3Q96JB2 828 aa27.58■■■□□ 2.01
PABPC1-215ENST00000520804 TMF1P82094 1093 aa27.57■■■□□ 2
PABPC1-215ENST00000520804 ANO8Q9HCE9 1232 aaPredicted RBP27.56■■■□□ 2
PABPC1-215ENST00000520804 NHSQ6T4R5 1651 aa27.56■■■□□ 2
PABPC1-215ENST00000520804 KCNQ2O43526 872 aa27.55■■■□□ 2
PABPC1-215ENST00000520804 FAM208AQ9UK61 1670 aaKnown RBP27.55■■■□□ 2
PABPC1-215ENST00000520804 MAP3K19Q56UN5 1328 aa27.53■■■□□ 2
PABPC1-215ENST00000520804 TXNRD1Q16881 649 aa27.53■■■□□ 2
PABPC1-215ENST00000520804 SPON1Q9HCB6 807 aa27.53■■■□□ 2
PABPC1-215ENST00000520804 LTV1Q96GA3 475 aaPredicted RBP27.52■■■□□ 2
PABPC1-215ENST00000520804 ACSBG1Q96GR2 724 aa27.51■■□□□ 1.99
PABPC1-215ENST00000520804 FBLN1P23142 703 aa27.5■■□□□ 1.99
PABPC1-215ENST00000520804 HOXC9P31274 260 aa27.5■■□□□ 1.99
PABPC1-215ENST00000520804 CASZ1Q86V15 1759 aa27.5■■□□□ 1.99
PABPC1-215ENST00000520804 AMPHP49418 695 aa27.49■■□□□ 1.99
PABPC1-215ENST00000520804 FYB1O15117 783 aa27.48■■□□□ 1.99
PABPC1-215ENST00000520804 CDCA8Q53HL2 280 aa27.48■■□□□ 1.99
PABPC1-215ENST00000520804 TIMELESSQ9UNS1 1208 aa27.47■■□□□ 1.99
PABPC1-215ENST00000520804 GGNBP2Q9H3C7 697 aa27.46■■□□□ 1.99
PABPC1-215ENST00000520804 STK32BQ9NY57 414 aa27.46■■□□□ 1.99
PABPC1-215ENST00000520804 PDGFDQ9GZP0 370 aaPredicted RBP27.45■■□□□ 1.98
PABPC1-215ENST00000520804 PPP1R1BQ9UD71 204 aaPredicted RBP27.45■■□□□ 1.98
PABPC1-215ENST00000520804 RTL1A6NKG5 1358 aa27.45■■□□□ 1.98
PABPC1-215ENST00000520804 BTAF1O14981 1849 aa27.44■■□□□ 1.98
PABPC1-215ENST00000520804 SLC15A2Q16348 729 aa27.43■■□□□ 1.98
PABPC1-215ENST00000520804 RRS1Q15050 365 aaKnown RBP27.42■■□□□ 1.98
PABPC1-215ENST00000520804 DDX54Q8TDD1 881 aaKnown RBP27.42■■□□□ 1.98
PABPC1-215ENST00000520804 RGPD2P0DJD1 1756 aa27.42■■□□□ 1.98
PABPC1-215ENST00000520804 CLSPNQ9HAW4 1339 aa27.41■■□□□ 1.98
PABPC1-215ENST00000520804 KIF20BQ96Q89 1820 aa27.41■■□□□ 1.98
PABPC1-215ENST00000520804 MYOM1P52179 1685 aa27.39■■□□□ 1.97
PABPC1-215ENST00000520804 PAPPAQ13219 1627 aa27.38■■□□□ 1.97
PABPC1-215ENST00000520804 ZBTB7AO95365 584 aa27.38■■□□□ 1.97
PABPC1-215ENST00000520804 KAT6BQ8WYB5 2073 aa27.37■■□□□ 1.97
PABPC1-215ENST00000520804 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
PABPC1-215ENST00000520804 MEGF6O75095 1541 aa27.36■■□□□ 1.97
PABPC1-215ENST00000520804 NBPF6Q5VWK0 638 aa27.36■■□□□ 1.97
PABPC1-215ENST00000520804 NBPF4Q96M43 638 aa27.36■■□□□ 1.97
PABPC1-215ENST00000520804 CARD14Q9BXL6 1004 aa27.36■■□□□ 1.97
PABPC1-215ENST00000520804 SHANK3Q9BYB0 1731 aa27.36■■□□□ 1.97
PABPC1-215ENST00000520804 ZCRB1Q8TBF4 217 aaKnown RBP27.35■■□□□ 1.97
PABPC1-215ENST00000520804 SMG6Q86US8 1419 aaKnown RBP27.34■■□□□ 1.97
PABPC1-215ENST00000520804 PTGER2P43116 358 aa27.34■■□□□ 1.97
PABPC1-215ENST00000520804 LRRC4BQ9NT99 713 aa27.33■■□□□ 1.97
PABPC1-215ENST00000520804 ATF5Q9Y2D1 282 aaPredicted RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms