RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CFAP99D6REC4 459 aa8.92□□□□□ -0.98
SQLE-204ENST00000520493 ARID5BQ14865 1188 aa8.92□□□□□ -0.98
SQLE-204ENST00000520493 SH3D19Q5HYK7 790 aa8.92□□□□□ -0.98
SQLE-204ENST00000520493 EVA1BQ9NVM1 165 aa8.92□□□□□ -0.98
SQLE-204ENST00000520493 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
SQLE-204ENST00000520493 LILRB3O75022 631 aa8.91□□□□□ -0.98
SQLE-204ENST00000520493 CTHP32929 405 aa8.91□□□□□ -0.98
SQLE-204ENST00000520493 KCNH2Q12809 1159 aa8.91□□□□□ -0.98
SQLE-204ENST00000520493 SKIV2LQ15477 1246 aaKnown RBP8.91□□□□□ -0.98
SQLE-204ENST00000520493 QPCTQ16769 361 aa8.91□□□□□ -0.98
SQLE-204ENST00000520493 PLA2G4EQ3MJ16 856 aa8.91□□□□□ -0.98
SQLE-204ENST00000520493 LYPD8Q6UX82 237 aa8.91□□□□□ -0.98
SQLE-204ENST00000520493 ZNF511Q8NB15 262 aa8.91□□□□□ -0.98
SQLE-204ENST00000520493 SPOCK3Q9BQ16 436 aa8.91□□□□□ -0.98
SQLE-204ENST00000520493 LINC00528Q8N1L1 170 aa8.9□□□□□ -0.98
SQLE-204ENST00000520493 SLURP2P0DP57 97 aa8.89□□□□□ -0.99
SQLE-204ENST00000520493 PTSQ03393 145 aa8.89□□□□□ -0.99
SQLE-204ENST00000520493 Q8N3U1 123 aa8.89□□□□□ -0.99
SQLE-204ENST00000520493 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.87□□□□□ -0.99
SQLE-204ENST00000520493 GALNT6Q8NCL4 622 aa8.87□□□□□ -0.99
SQLE-204ENST00000520493 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
SQLE-204ENST00000520493 NANOS1Q8WY41 292 aaKnown RBP8.87□□□□□ -0.99
SQLE-204ENST00000520493 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
SQLE-204ENST00000520493 KRTAP1-3Q8IUG1 177 aa8.86□□□□□ -0.99
SQLE-204ENST00000520493 FIGNL2A6NMB9 653 aa8.85□□□□□ -0.99
SQLE-204ENST00000520493 NR3C2P08235 984 aa8.85□□□□□ -0.99
SQLE-204ENST00000520493 VWA5B2Q8N398 1253 aa8.85□□□□□ -0.99
SQLE-204ENST00000520493 CDC14CA4D256 554 aa8.84□□□□□ -0.99
SQLE-204ENST00000520493 K7ELQ4 463 aaPredicted RBP8.84□□□□□ -0.99
SQLE-204ENST00000520493 LYPD4Q6UWN0 246 aa8.84□□□□□ -0.99
SQLE-204ENST00000520493 MEIOBQ8N635 442 aa8.84□□□□□ -0.99
SQLE-204ENST00000520493 CCDC155Q8N6L0 562 aa8.84□□□□□ -0.99
SQLE-204ENST00000520493 ARMC2Q8NEN0 867 aa8.84□□□□□ -0.99
SQLE-204ENST00000520493 DCAF5Q96JK2 942 aa8.84□□□□□ -0.99
SQLE-204ENST00000520493 PCMTD1Q96MG8 357 aaPredicted RBP8.84□□□□□ -0.99
SQLE-204ENST00000520493 F12P00748 615 aaPredicted RBP8.83□□□□□ -1
SQLE-204ENST00000520493 ITGB2P05107 769 aa8.83□□□□□ -1
SQLE-204ENST00000520493 BRPF1P55201 1214 aaPredicted RBP8.83□□□□□ -1
SQLE-204ENST00000520493 MAP3K10Q02779 954 aa8.83□□□□□ -1
SQLE-204ENST00000520493 GOPCQ9HD26 462 aa8.83□□□□□ -1
SQLE-204ENST00000520493 MAP10Q9P2G4 905 aa8.83□□□□□ -1
SQLE-204ENST00000520493 TTLL8A6PVC2 850 aa8.82□□□□□ -1
SQLE-204ENST00000520493 PER1O15534 1290 aaPredicted RBP8.82□□□□□ -1
SQLE-204ENST00000520493 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
SQLE-204ENST00000520493 IL27Q8NEV9 243 aa8.82□□□□□ -1
SQLE-204ENST00000520493 CDK15Q96Q40 435 aa8.82□□□□□ -1
SQLE-204ENST00000520493 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
SQLE-204ENST00000520493 ADAMTS2O95450 1211 aa8.81□□□□□ -1
SQLE-204ENST00000520493 NR5A1Q13285 461 aa8.81□□□□□ -1
SQLE-204ENST00000520493 PROCP04070 461 aa8.8□□□□□ -1
SQLE-204ENST00000520493 NBPF14Q5TI25 921 aa8.8□□□□□ -1
SQLE-204ENST00000520493 PPP2R2DQ66LE6 453 aa8.8□□□□□ -1
SQLE-204ENST00000520493 SV2AQ7L0J3 742 aa8.8□□□□□ -1
SQLE-204ENST00000520493 CNTNAP5Q8WYK1 1306 aa8.8□□□□□ -1
SQLE-204ENST00000520493 PRKCSHP14314 528 aaPredicted RBP8.79□□□□□ -1
SQLE-204ENST00000520493 AGERQ15109 404 aa8.79□□□□□ -1
SQLE-204ENST00000520493 FOXJ1Q92949 421 aa8.79□□□□□ -1
SQLE-204ENST00000520493 TSEN34Q9BSV6 310 aaKnown RBP8.79□□□□□ -1
SQLE-204ENST00000520493 PHF20L1A8MW92 1017 aa8.78□□□□□ -1
SQLE-204ENST00000520493 AP1G2O75843 785 aa8.78□□□□□ -1
SQLE-204ENST00000520493 CTDSPL2Q05D32 466 aa8.78□□□□□ -1
SQLE-204ENST00000520493 CELA2BP08218 269 aaPredicted RBP8.77□□□□□ -1.01
SQLE-204ENST00000520493 GRM5P41594 1212 aa8.77□□□□□ -1.01
SQLE-204ENST00000520493 BPHLQ86WA6 291 aaPredicted RBP8.77□□□□□ -1.01
SQLE-204ENST00000520493 ITGA6P23229 1130 aa8.76□□□□□ -1.01
SQLE-204ENST00000520493 PNMA1Q8ND90 353 aa8.76□□□□□ -1.01
SQLE-204ENST00000520493 GPKOWQ92917 476 aaPredicted RBP eCLIP8.76□□□□□ -1.01
SQLE-204ENST00000520493 ENAMQ9NRM1 1142 aa8.76□□□□□ -1.01
SQLE-204ENST00000520493 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
SQLE-204ENST00000520493 RFC5P40937 340 aa8.74□□□□□ -1.01
SQLE-204ENST00000520493 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
SQLE-204ENST00000520493 LRRN4Q8WUT4 740 aa8.74□□□□□ -1.01
SQLE-204ENST00000520493 TMEM259Q4ZIN3 620 aa8.73□□□□□ -1.01
SQLE-204ENST00000520493 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
SQLE-204ENST00000520493 USP17L8P0C7I0 530 aa8.72□□□□□ -1.01
SQLE-204ENST00000520493 ZC3H4Q9UPT8 1303 aaKnown RBP8.72□□□□□ -1.01
SQLE-204ENST00000520493 FURINP09958 794 aa8.71□□□□□ -1.02
SQLE-204ENST00000520493 BAG6P46379 1132 aa8.71□□□□□ -1.02
SQLE-204ENST00000520493 SRSF11Q05519 484 aaKnown RBP8.71□□□□□ -1.02
SQLE-204ENST00000520493 FBXO31Q5XUX0 539 aaPredicted RBP8.71□□□□□ -1.02
SQLE-204ENST00000520493 PODNQ7Z5L7 613 aa8.71□□□□□ -1.02
SQLE-204ENST00000520493 FKBPLQ9UIM3 349 aa8.71□□□□□ -1.02
SQLE-204ENST00000520493 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
SQLE-204ENST00000520493 FSHRP23945 695 aa8.7□□□□□ -1.02
SQLE-204ENST00000520493 NR6A1Q15406 480 aa8.7□□□□□ -1.02
SQLE-204ENST00000520493 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
SQLE-204ENST00000520493 LCE3BQ5TA77 95 aa8.69□□□□□ -1.02
SQLE-204ENST00000520493 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
SQLE-204ENST00000520493 NEDD1Q8NHV4 660 aa8.69□□□□□ -1.02
SQLE-204ENST00000520493 SH3BP5LQ7L8J4 393 aa8.68□□□□□ -1.02
SQLE-204ENST00000520493 ARHGAP9Q9BRR9 750 aa8.68□□□□□ -1.02
SQLE-204ENST00000520493 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
SQLE-204ENST00000520493 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
SQLE-204ENST00000520493 PTK2Q05397 1052 aa8.66□□□□□ -1.02
SQLE-204ENST00000520493 CBLBQ13191 982 aa8.66□□□□□ -1.02
SQLE-204ENST00000520493 ZBTB33Q86T24 672 aa8.66□□□□□ -1.02
SQLE-204ENST00000520493 APBB1O00213 710 aa8.65□□□□□ -1.02
SQLE-204ENST00000520493 SPINT1O43278 529 aa8.65□□□□□ -1.02
SQLE-204ENST00000520493 GAS6Q14393 721 aa8.65□□□□□ -1.02
SQLE-204ENST00000520493 VASH1Q7L8A9 365 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms