RNA–Protein interactions for RNA: ENST00000520429.5

CCNC-210, Transcript of cyclin C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCNC, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-210ENST00000520429 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
CCNC-210ENST00000520429 VAMP4O75379 141 aa17.92■□□□□ 0.46
CCNC-210ENST00000520429 NEFMP07197 916 aa17.92■□□□□ 0.46
CCNC-210ENST00000520429 AKAP12Q02952 1782 aa17.91■□□□□ 0.46
CCNC-210ENST00000520429 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
CCNC-210ENST00000520429 TTC21BQ7Z4L5 1316 aa17.91■□□□□ 0.46
CCNC-210ENST00000520429 EIF4A2Q14240 407 aaKnown RBP17.9■□□□□ 0.46
CCNC-210ENST00000520429 C8orf58Q8NAV2 365 aa17.9■□□□□ 0.46
CCNC-210ENST00000520429 HSP90AB2PQ58FF8 381 aa17.9■□□□□ 0.46
CCNC-210ENST00000520429 ZBTB40Q9NUA8 1239 aa17.9■□□□□ 0.46
CCNC-210ENST00000520429 VIRMAQ69YN4 1812 aaKnown RBP17.89■□□□□ 0.46
CCNC-210ENST00000520429 DLG5Q8TDM6 1919 aa17.89■□□□□ 0.45
CCNC-210ENST00000520429 AAMPQ13685 434 aa17.89■□□□□ 0.45
CCNC-210ENST00000520429 DDX19BQ9UMR2 479 aa17.89■□□□□ 0.45
CCNC-210ENST00000520429 ZNF853P0CG23 659 aa17.89■□□□□ 0.45
CCNC-210ENST00000520429 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
CCNC-210ENST00000520429 PLEKHG1Q9ULL1 1385 aa17.88■□□□□ 0.45
CCNC-210ENST00000520429 ITSN1Q15811 1721 aa17.88■□□□□ 0.45
CCNC-210ENST00000520429 KRT24Q2M2I5 525 aa17.88■□□□□ 0.45
CCNC-210ENST00000520429 SULT6B1Q6IMI4 303 aa17.88■□□□□ 0.45
CCNC-210ENST00000520429 ZNF692Q9BU19 519 aaPredicted RBP17.88■□□□□ 0.45
CCNC-210ENST00000520429 RTL5Q5HYW3 569 aaPredicted RBP17.88■□□□□ 0.45
CCNC-210ENST00000520429 C1orf115Q9H7X2 142 aa17.88■□□□□ 0.45
CCNC-210ENST00000520429 MRPL50Q8N5N7 158 aaKnown RBP17.87■□□□□ 0.45
CCNC-210ENST00000520429 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
CCNC-210ENST00000520429 ALDH1L2Q3SY69 923 aa17.86■□□□□ 0.45
CCNC-210ENST00000520429 HDAC1Q13547 482 aaPredicted RBP17.85■□□□□ 0.45
CCNC-210ENST00000520429 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
CCNC-210ENST00000520429 PLEKHG3A1L390 1219 aa17.84■□□□□ 0.45
CCNC-210ENST00000520429 USP6P35125 1406 aa17.84■□□□□ 0.45
CCNC-210ENST00000520429 TWISTNBQ3B726 338 aaPredicted RBP17.84■□□□□ 0.45
CCNC-210ENST00000520429 MCM10Q7L590 875 aa17.84■□□□□ 0.45
CCNC-210ENST00000520429 PEAK1Q9H792 1746 aa17.84■□□□□ 0.45
CCNC-210ENST00000520429 OVOS2A0A0J9YW53 1432 aa17.84■□□□□ 0.45
CCNC-210ENST00000520429 OVOS2Q6IE36 1432 aa17.84■□□□□ 0.45
CCNC-210ENST00000520429 NRKQ7Z2Y5 1582 aa17.84■□□□□ 0.45
CCNC-210ENST00000520429 GNAI1P63096 354 aa17.83■□□□□ 0.45
CCNC-210ENST00000520429 IPO8O15397 1037 aaKnown RBP17.83■□□□□ 0.44
CCNC-210ENST00000520429 CFAP44Q96MT7 982 aa17.83■□□□□ 0.44
CCNC-210ENST00000520429 DAXXQ9UER7 740 aaPredicted RBP17.82■□□□□ 0.44
CCNC-210ENST00000520429 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
CCNC-210ENST00000520429 TOPAZ1Q8N9V7 1692 aa17.82■□□□□ 0.44
CCNC-210ENST00000520429 ZBTB7BO15156 539 aaPredicted RBP17.82■□□□□ 0.44
CCNC-210ENST00000520429 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
CCNC-210ENST00000520429 NFKBIBQ15653 356 aa17.81■□□□□ 0.44
CCNC-210ENST00000520429 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
CCNC-210ENST00000520429 FOXO3O43524 673 aa17.81■□□□□ 0.44
CCNC-210ENST00000520429 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
CCNC-210ENST00000520429 LNPKQ9C0E8 428 aa17.8■□□□□ 0.44
CCNC-210ENST00000520429 NUTM2GQ5VZR2 741 aa17.8■□□□□ 0.44
CCNC-210ENST00000520429 MIS18AQ9NYP9 233 aa17.8■□□□□ 0.44
CCNC-210ENST00000520429 MAP3K19Q56UN5 1328 aa17.8■□□□□ 0.44
CCNC-210ENST00000520429 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
CCNC-210ENST00000520429 SIRT2Q8IXJ6 389 aa17.79■□□□□ 0.44
CCNC-210ENST00000520429 SSH2Q76I76 1423 aa17.79■□□□□ 0.44
CCNC-210ENST00000520429 BCL11AQ9H165 835 aa17.78■□□□□ 0.44
CCNC-210ENST00000520429 KCNA6P17658 529 aa17.77■□□□□ 0.44
CCNC-210ENST00000520429 CALD1Q05682 793 aaKnown RBP17.77■□□□□ 0.44
CCNC-210ENST00000520429 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.44
CCNC-210ENST00000520429 TBX22Q9Y458 520 aa17.77■□□□□ 0.44
CCNC-210ENST00000520429 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.43
CCNC-210ENST00000520429 ARHGAP23Q9P227 1491 aa17.77■□□□□ 0.43
CCNC-210ENST00000520429 RIMS1Q86UR5 1692 aaKnown RBP17.77■□□□□ 0.43
CCNC-210ENST00000520429 PTCH1Q13635 1447 aa17.76■□□□□ 0.43
CCNC-210ENST00000520429 NUCB1Q02818 461 aa17.76■□□□□ 0.43
CCNC-210ENST00000520429 ABCC4O15439 1325 aa17.76■□□□□ 0.43
CCNC-210ENST00000520429 USP31Q70CQ4 1352 aa17.76■□□□□ 0.43
CCNC-210ENST00000520429 SLIT1O75093 1534 aa17.75■□□□□ 0.43
CCNC-210ENST00000520429 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
CCNC-210ENST00000520429 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
CCNC-210ENST00000520429 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
CCNC-210ENST00000520429 LMOD3Q0VAK6 560 aa17.75■□□□□ 0.43
CCNC-210ENST00000520429 ARHGAP45Q92619 1136 aa17.74■□□□□ 0.43
CCNC-210ENST00000520429 SLKQ9H2G2 1235 aaPredicted RBP17.74■□□□□ 0.43
CCNC-210ENST00000520429 PIK3R4Q99570 1358 aa17.74■□□□□ 0.43
CCNC-210ENST00000520429 NALCNQ8IZF0 1738 aa17.74■□□□□ 0.43
CCNC-210ENST00000520429 DIP2AQ14689 1571 aa17.73■□□□□ 0.43
CCNC-210ENST00000520429 MTHFSDQ2M296 383 aaKnown RBP17.73■□□□□ 0.43
CCNC-210ENST00000520429 FER1L4A9Z1Z3 1794 aa17.73■□□□□ 0.43
CCNC-210ENST00000520429 CHL1O00533 1208 aa17.73■□□□□ 0.43
CCNC-210ENST00000520429 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
CCNC-210ENST00000520429 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
CCNC-210ENST00000520429 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
CCNC-210ENST00000520429 RGPD1P0DJD0 1748 aa17.72■□□□□ 0.43
CCNC-210ENST00000520429 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
CCNC-210ENST00000520429 SPRYD3Q8NCJ5 442 aa17.72■□□□□ 0.43
CCNC-210ENST00000520429 EYA1Q99502 592 aa17.72■□□□□ 0.43
CCNC-210ENST00000520429 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
CCNC-210ENST00000520429 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
CCNC-210ENST00000520429 CEP170BQ9Y4F5 1589 aaPredicted RBP17.7■□□□□ 0.42
CCNC-210ENST00000520429 NLRP6P59044 892 aa17.7■□□□□ 0.42
CCNC-210ENST00000520429 CRB1P82279 1406 aa17.69■□□□□ 0.42
CCNC-210ENST00000520429 PIK3C2AO00443 1686 aa17.69■□□□□ 0.42
CCNC-210ENST00000520429 RGS12O14924 1447 aa17.69■□□□□ 0.42
CCNC-210ENST00000520429 AMPHP49418 695 aa17.69■□□□□ 0.42
CCNC-210ENST00000520429 UPF2Q9HAU5 1272 aaKnown RBP17.69■□□□□ 0.42
CCNC-210ENST00000520429 C22orf23Q9BZE7 217 aa17.68■□□□□ 0.42
CCNC-210ENST00000520429 TTC21AQ8NDW8 1320 aa17.68■□□□□ 0.42
CCNC-210ENST00000520429 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
CCNC-210ENST00000520429 G2E3Q7L622 706 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms