RNA–Protein interactions for RNA: ENST00000520354.5

GINS4-204, Transcript of GINS complex subunit 4, humanhuman

TSL 2

Gene GINS4, Length 835 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-204ENST00000520354 MYT1Q01538 1121 aa17.27■□□□□ 0.36
GINS4-204ENST00000520354 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
GINS4-204ENST00000520354 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.36
GINS4-204ENST00000520354 SEPT12Q8IYM1 358 aa17.27■□□□□ 0.36
GINS4-204ENST00000520354 COG3Q96JB2 828 aa17.27■□□□□ 0.36
GINS4-204ENST00000520354 SPATA31A1Q5TZJ5 1347 aa17.26■□□□□ 0.35
GINS4-204ENST00000520354 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
GINS4-204ENST00000520354 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
GINS4-204ENST00000520354 FYB1O15117 783 aa17.25■□□□□ 0.35
GINS4-204ENST00000520354 ONECUT3O60422 494 aaPredicted RBP17.25■□□□□ 0.35
GINS4-204ENST00000520354 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
GINS4-204ENST00000520354 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
GINS4-204ENST00000520354 ABCC6O95255 1503 aa17.25■□□□□ 0.35
GINS4-204ENST00000520354 CRB1P82279 1406 aa17.23■□□□□ 0.35
GINS4-204ENST00000520354 KIF7Q2M1P5 1343 aa17.22■□□□□ 0.35
GINS4-204ENST00000520354 UPF1Q92900 1129 aaKnown RBP eCLIP17.22■□□□□ 0.35
GINS4-204ENST00000520354 FBLN1P23142 703 aa17.21■□□□□ 0.35
GINS4-204ENST00000520354 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.34
GINS4-204ENST00000520354 WNK3Q9BYP7 1800 aa17.2■□□□□ 0.34
GINS4-204ENST00000520354 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
GINS4-204ENST00000520354 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
GINS4-204ENST00000520354 PANK3Q9H999 370 aa17.2■□□□□ 0.34
GINS4-204ENST00000520354 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
GINS4-204ENST00000520354 CGNL1Q0VF96 1302 aa17.2■□□□□ 0.34
GINS4-204ENST00000520354 CSB-PGBD3P0DP91 1061 aa17.19■□□□□ 0.34
GINS4-204ENST00000520354 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
GINS4-204ENST00000520354 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
GINS4-204ENST00000520354 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
GINS4-204ENST00000520354 BLMP54132 1417 aaPredicted RBP17.17■□□□□ 0.34
GINS4-204ENST00000520354 PARP4Q9UKK3 1724 aaKnown RBP17.17■□□□□ 0.34
GINS4-204ENST00000520354 THRAP3Q9Y2W1 955 aaKnown RBP17.17■□□□□ 0.34
GINS4-204ENST00000520354 AMPHP49418 695 aa17.16■□□□□ 0.34
GINS4-204ENST00000520354 RRS1Q15050 365 aaKnown RBP17.16■□□□□ 0.34
GINS4-204ENST00000520354 IP6K1Q92551 441 aa17.16■□□□□ 0.34
GINS4-204ENST00000520354 ERBB3P21860 1342 aa17.16■□□□□ 0.34
GINS4-204ENST00000520354 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
GINS4-204ENST00000520354 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
GINS4-204ENST00000520354 CARD10Q9BWT7 1032 aa17.15■□□□□ 0.34
GINS4-204ENST00000520354 FAM208AQ9UK61 1670 aaKnown RBP17.15■□□□□ 0.34
GINS4-204ENST00000520354 PEAK1Q9H792 1746 aa17.15■□□□□ 0.34
GINS4-204ENST00000520354 HOXC9P31274 260 aa17.14■□□□□ 0.33
GINS4-204ENST00000520354 FAM182BQ5T319 152 aa17.14■□□□□ 0.33
GINS4-204ENST00000520354 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
GINS4-204ENST00000520354 MAP2P11137 1827 aaKnown RBP17.14■□□□□ 0.33
GINS4-204ENST00000520354 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
GINS4-204ENST00000520354 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
GINS4-204ENST00000520354 RGPD2P0DJD1 1756 aa17.13■□□□□ 0.33
GINS4-204ENST00000520354 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
GINS4-204ENST00000520354 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
GINS4-204ENST00000520354 PDE3BQ13370 1112 aa17.11■□□□□ 0.33
GINS4-204ENST00000520354 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
GINS4-204ENST00000520354 NSD2O96028 1365 aa17.11■□□□□ 0.33
GINS4-204ENST00000520354 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
GINS4-204ENST00000520354 DISP2A7MBM2 1401 aa17.1■□□□□ 0.33
GINS4-204ENST00000520354 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
GINS4-204ENST00000520354 FLT4P35916 1363 aa17.09■□□□□ 0.33
GINS4-204ENST00000520354 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
GINS4-204ENST00000520354 KIF24Q5T7B8 1368 aa17.08■□□□□ 0.32
GINS4-204ENST00000520354 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
GINS4-204ENST00000520354 CDCA7Q9BWT1 371 aaPredicted RBP17.08■□□□□ 0.32
GINS4-204ENST00000520354 INSRP06213 1382 aa17.07■□□□□ 0.32
GINS4-204ENST00000520354 DDB1Q16531 1140 aa17.07■□□□□ 0.32
GINS4-204ENST00000520354 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
GINS4-204ENST00000520354 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
GINS4-204ENST00000520354 SMG6Q86US8 1419 aaKnown RBP17.06■□□□□ 0.32
GINS4-204ENST00000520354 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
GINS4-204ENST00000520354 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
GINS4-204ENST00000520354 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
GINS4-204ENST00000520354 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
GINS4-204ENST00000520354 POLKQ9UBT6 870 aa17.05■□□□□ 0.32
GINS4-204ENST00000520354 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
GINS4-204ENST00000520354 PER1O15534 1290 aaPredicted RBP17.04■□□□□ 0.32
GINS4-204ENST00000520354 IL2RBP14784 551 aa17.04■□□□□ 0.32
GINS4-204ENST00000520354 SF3B2Q13435 895 aaKnown RBP17.04■□□□□ 0.32
GINS4-204ENST00000520354 OVOS2A0A0G2JMS6 1433 aa17.03■□□□□ 0.32
GINS4-204ENST00000520354 SBF2Q86WG5 1849 aa17.03■□□□□ 0.32
GINS4-204ENST00000520354 EXOC5O00471 708 aa17.02■□□□□ 0.32
GINS4-204ENST00000520354 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.32
GINS4-204ENST00000520354 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
GINS4-204ENST00000520354 NBPF4Q96M43 638 aa17.02■□□□□ 0.32
GINS4-204ENST00000520354 TRIM37O94972 964 aa17.01■□□□□ 0.31
GINS4-204ENST00000520354 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
GINS4-204ENST00000520354 DEFB132Q7Z7B7 95 aa17.01■□□□□ 0.31
GINS4-204ENST00000520354 MARCH10Q8NA82 808 aaPredicted RBP17.01■□□□□ 0.31
GINS4-204ENST00000520354 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
GINS4-204ENST00000520354 MEGF6O75095 1541 aa17■□□□□ 0.31
GINS4-204ENST00000520354 SHANK3Q9BYB0 1731 aa16.99■□□□□ 0.31
GINS4-204ENST00000520354 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
GINS4-204ENST00000520354 BAG6P46379 1132 aa16.97■□□□□ 0.31
GINS4-204ENST00000520354 NPC1L1Q9UHC9 1359 aa16.97■□□□□ 0.31
GINS4-204ENST00000520354 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
GINS4-204ENST00000520354 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
GINS4-204ENST00000520354 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
GINS4-204ENST00000520354 BCL9O00512 1426 aa16.95■□□□□ 0.3
GINS4-204ENST00000520354 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
GINS4-204ENST00000520354 APBA3O96018 575 aa16.94■□□□□ 0.3
GINS4-204ENST00000520354 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
GINS4-204ENST00000520354 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
GINS4-204ENST00000520354 EYA1Q99502 592 aa16.94■□□□□ 0.3
GINS4-204ENST00000520354 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms