RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 VASH1Q7L8A9 365 aaPredicted RBP10.42□□□□□ -0.74
NPM1-206ENST00000519955 CCDC125Q86Z20 511 aa10.42□□□□□ -0.74
NPM1-206ENST00000519955 RNF135Q8IUD6 432 aa10.41□□□□□ -0.74
NPM1-206ENST00000519955 SEPT12Q8IYM1 358 aa10.41□□□□□ -0.74
NPM1-206ENST00000519955 KCTD15Q96SI1 283 aaPredicted RBP10.41□□□□□ -0.74
NPM1-206ENST00000519955 PALM3A6NDB9 673 aaPredicted RBP10.4□□□□□ -0.74
NPM1-206ENST00000519955 ESPNB1AK53 854 aa10.4□□□□□ -0.74
NPM1-206ENST00000519955 GIGYF1O75420 1035 aaPredicted RBP10.4□□□□□ -0.74
NPM1-206ENST00000519955 FOXC1Q12948 553 aa10.4□□□□□ -0.74
NPM1-206ENST00000519955 ARID5BQ14865 1188 aa10.4□□□□□ -0.74
NPM1-206ENST00000519955 PHTF2Q8N3S3 785 aa10.4□□□□□ -0.74
NPM1-206ENST00000519955 PKD2L1Q9P0L9 805 aa10.4□□□□□ -0.74
NPM1-206ENST00000519955 PIK3CDO00329 1044 aa10.39□□□□□ -0.75
NPM1-206ENST00000519955 ATP9BO43861 1147 aa10.39□□□□□ -0.75
NPM1-206ENST00000519955 TFIP11Q9UBB9 837 aaKnown RBP10.39□□□□□ -0.75
NPM1-206ENST00000519955 TLL2Q9Y6L7 1015 aa10.39□□□□□ -0.75
NPM1-206ENST00000519955 SKIP12755 728 aa10.38□□□□□ -0.75
NPM1-206ENST00000519955 TBC1D9Q6ZT07 1266 aa10.38□□□□□ -0.75
NPM1-206ENST00000519955 CHIC2Q9UKJ5 165 aa10.38□□□□□ -0.75
NPM1-206ENST00000519955 GDF9O60383 454 aa10.37□□□□□ -0.75
NPM1-206ENST00000519955 GFRA3O60609 400 aa10.37□□□□□ -0.75
NPM1-206ENST00000519955 ADH1CP00326 375 aa10.37□□□□□ -0.75
NPM1-206ENST00000519955 MAP7D1Q3KQU3 841 aa10.37□□□□□ -0.75
NPM1-206ENST00000519955 CFAP70Q5T0N1 1121 aa10.37□□□□□ -0.75
NPM1-206ENST00000519955 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
NPM1-206ENST00000519955 MAFBQ9Y5Q3 323 aaPredicted RBP10.37□□□□□ -0.75
NPM1-206ENST00000519955 LZTS3O60299 673 aaPredicted RBP10.36□□□□□ -0.75
NPM1-206ENST00000519955 NR5A1Q13285 461 aa10.36□□□□□ -0.75
NPM1-206ENST00000519955 PLPP7Q8NBV4 271 aa10.36□□□□□ -0.75
NPM1-206ENST00000519955 SNIP1Q8TAD8 396 aaKnown RBP10.36□□□□□ -0.75
NPM1-206ENST00000519955 FSHRP23945 695 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 GRM5P41594 1212 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 PRR20EP86478 221 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 PRR20CP86479 221 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 PRR20DP86480 221 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 PRR20BP86481 221 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 PRR20AP86496 221 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 INTS6LQ5JSJ4 861 aaKnown RBP10.35□□□□□ -0.75
NPM1-206ENST00000519955 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 TRIM52Q96A61 297 aa10.35□□□□□ -0.75
NPM1-206ENST00000519955 USP17L5A8MUK1 530 aa10.34□□□□□ -0.75
NPM1-206ENST00000519955 ALDH1A1P00352 501 aa10.34□□□□□ -0.75
NPM1-206ENST00000519955 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
NPM1-206ENST00000519955 DHX9Q08211 1270 aaKnown RBP10.34□□□□□ -0.75
NPM1-206ENST00000519955 LAPTM4AQ15012 233 aa10.34□□□□□ -0.75
NPM1-206ENST00000519955 CYP4X1Q8N118 509 aa10.34□□□□□ -0.75
NPM1-206ENST00000519955 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
NPM1-206ENST00000519955 USP17L3A6NCW0 530 aa10.33□□□□□ -0.76
NPM1-206ENST00000519955 USP17L4A6NCW7 530 aa10.33□□□□□ -0.76
NPM1-206ENST00000519955 USP17L2Q6R6M4 530 aa10.33□□□□□ -0.76
NPM1-206ENST00000519955 USP17L1Q7RTZ2 530 aa10.33□□□□□ -0.76
NPM1-206ENST00000519955 CCDC85AQ96PX6 553 aaPredicted RBP10.33□□□□□ -0.76
NPM1-206ENST00000519955 WASF2Q9Y6W5 498 aa10.33□□□□□ -0.76
NPM1-206ENST00000519955 TTC24A2A3L6 582 aaPredicted RBP10.32□□□□□ -0.76
NPM1-206ENST00000519955 TNFRSF10AO00220 468 aa10.32□□□□□ -0.76
NPM1-206ENST00000519955 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
NPM1-206ENST00000519955 RAB15P59190 212 aa10.32□□□□□ -0.76
NPM1-206ENST00000519955 PCDHB11Q9Y5F2 797 aa10.32□□□□□ -0.76
NPM1-206ENST00000519955 RFX1P22670 979 aa10.31□□□□□ -0.76
NPM1-206ENST00000519955 EML3Q32P44 896 aa10.31□□□□□ -0.76
NPM1-206ENST00000519955 TRIM67Q6ZTA4 783 aa10.31□□□□□ -0.76
NPM1-206ENST00000519955 CCDC116Q8IYX3 515 aa10.31□□□□□ -0.76
NPM1-206ENST00000519955 PBXIP1Q96AQ6 731 aa10.31□□□□□ -0.76
NPM1-206ENST00000519955 TOR4AQ9NXH8 423 aa10.31□□□□□ -0.76
NPM1-206ENST00000519955 ERVH48-1M5A8F1 160 aa10.3□□□□□ -0.76
NPM1-206ENST00000519955 NCOA4Q13772 614 aa10.3□□□□□ -0.76
NPM1-206ENST00000519955 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
NPM1-206ENST00000519955 SIRT1Q96EB6 747 aa10.3□□□□□ -0.76
NPM1-206ENST00000519955 DEPDC4Q8N2C3 294 aa10.29□□□□□ -0.76
NPM1-206ENST00000519955 NR3C2P08235 984 aa10.28□□□□□ -0.76
NPM1-206ENST00000519955 USP4Q13107 963 aa10.28□□□□□ -0.76
NPM1-206ENST00000519955 NNTQ13423 1086 aa10.28□□□□□ -0.76
NPM1-206ENST00000519955 OXLD1Q5BKU9 147 aa10.28□□□□□ -0.76
NPM1-206ENST00000519955 VRTNQ9H8Y1 702 aa10.28□□□□□ -0.76
NPM1-206ENST00000519955 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.27□□□□□ -0.77
NPM1-206ENST00000519955 J3QL48 77 aa10.27□□□□□ -0.77
NPM1-206ENST00000519955 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.77
NPM1-206ENST00000519955 PPP1R26Q5T8A7 1209 aaPredicted RBP10.27□□□□□ -0.77
NPM1-206ENST00000519955 CDCA7Q9BWT1 371 aaPredicted RBP10.27□□□□□ -0.77
NPM1-206ENST00000519955 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.77
NPM1-206ENST00000519955 NOD1Q9Y239 953 aa10.27□□□□□ -0.77
NPM1-206ENST00000519955 EMILIN1Q9Y6C2 1016 aa10.27□□□□□ -0.77
NPM1-206ENST00000519955 ATP5J2-PTCD1G3V325 749 aa10.26□□□□□ -0.77
NPM1-206ENST00000519955 MYCP01106 439 aaPredicted RBP10.26□□□□□ -0.77
NPM1-206ENST00000519955 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
NPM1-206ENST00000519955 MKRN1Q9UHC7 482 aaKnown RBP10.26□□□□□ -0.77
NPM1-206ENST00000519955 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
NPM1-206ENST00000519955 SMPD1P17405 629 aa10.25□□□□□ -0.77
NPM1-206ENST00000519955 ERVK-9P63128 1117 aa10.25□□□□□ -0.77
NPM1-206ENST00000519955 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
NPM1-206ENST00000519955 CC2D2BQ6DHV5 1058 aa10.25□□□□□ -0.77
NPM1-206ENST00000519955 ARXQ96QS3 562 aa10.25□□□□□ -0.77
NPM1-206ENST00000519955 ESF1Q9H501 851 aaKnown RBP10.25□□□□□ -0.77
NPM1-206ENST00000519955 ACIN1Q9UKV3 1341 aaKnown RBP10.25□□□□□ -0.77
NPM1-206ENST00000519955 NRG2O14511 850 aaPredicted RBP10.24□□□□□ -0.77
NPM1-206ENST00000519955 MYT1Q01538 1121 aa10.24□□□□□ -0.77
NPM1-206ENST00000519955 TMPRSS4Q9NRS4 437 aa10.24□□□□□ -0.77
NPM1-206ENST00000519955 ATP1A2P50993 1020 aa10.23□□□□□ -0.77
NPM1-206ENST00000519955 ZNF784Q8NCA9 323 aaPredicted RBP10.23□□□□□ -0.77
NPM1-206ENST00000519955 CYLDQ9NQC7 956 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms