RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 PCDHB15Q9Y5E8 787 aa6.75□□□□□ -1.33
PABPC1-212ENST00000519622 SUPT6HQ7KZ85 1726 aaKnown RBP6.75□□□□□ -1.33
PABPC1-212ENST00000519622 KDM5BQ9UGL1 1544 aa6.75□□□□□ -1.33
PABPC1-212ENST00000519622 NCOA2Q15596 1464 aa6.74□□□□□ -1.33
PABPC1-212ENST00000519622 QPCTQ16769 361 aa6.74□□□□□ -1.33
PABPC1-212ENST00000519622 FBXO31Q5XUX0 539 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-212ENST00000519622 CYP4X1Q8N118 509 aa6.74□□□□□ -1.33
PABPC1-212ENST00000519622 CCDC24Q8N4L8 307 aa6.74□□□□□ -1.33
PABPC1-212ENST00000519622 CABLES1Q8TDN4 633 aa6.74□□□□□ -1.33
PABPC1-212ENST00000519622 PCMTD1Q96MG8 357 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-212ENST00000519622 GOPCQ9HD26 462 aa6.74□□□□□ -1.33
PABPC1-212ENST00000519622 PTPN23Q9H3S7 1636 aa6.74□□□□□ -1.33
PABPC1-212ENST00000519622 GCC2Q8IWJ2 1684 aa6.74□□□□□ -1.33
PABPC1-212ENST00000519622 DENND4BO75064 1496 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-212ENST00000519622 GRIN2AQ12879 1464 aa6.73□□□□□ -1.33
PABPC1-212ENST00000519622 EPRSP07814 1512 aaKnown RBP6.73□□□□□ -1.33
PABPC1-212ENST00000519622 CDK13Q14004 1512 aaKnown RBP6.73□□□□□ -1.33
PABPC1-212ENST00000519622 SKOR1P84550 965 aa6.73□□□□□ -1.33
PABPC1-212ENST00000519622 KDM6BO15054 1643 aa6.72□□□□□ -1.33
PABPC1-212ENST00000519622 KIAA0586Q9BVV6 1533 aa6.72□□□□□ -1.33
PABPC1-212ENST00000519622 WNT7AO00755 349 aa6.72□□□□□ -1.33
PABPC1-212ENST00000519622 AVPP01185 164 aa6.72□□□□□ -1.33
PABPC1-212ENST00000519622 PTCRAQ6ISU1 281 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-212ENST00000519622 MRGPRX2Q96LB1 330 aa6.72□□□□□ -1.33
PABPC1-212ENST00000519622 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.72□□□□□ -1.33
PABPC1-212ENST00000519622 MYOM3Q5VTT5 1437 aa6.72□□□□□ -1.33
PABPC1-212ENST00000519622 SETD5Q9C0A6 1442 aa6.72□□□□□ -1.33
PABPC1-212ENST00000519622 NUP153P49790 1475 aaKnown RBP6.72□□□□□ -1.33
PABPC1-212ENST00000519622 CCDC18Q5T9S5 1454 aa6.72□□□□□ -1.33
PABPC1-212ENST00000519622 NUP160Q12769 1436 aa6.71□□□□□ -1.34
PABPC1-212ENST00000519622 C6orf229H3BNL8 230 aa6.71□□□□□ -1.34
PABPC1-212ENST00000519622 J3QL48 77 aa6.71□□□□□ -1.34
PABPC1-212ENST00000519622 SMPD1P17405 629 aa6.71□□□□□ -1.34
PABPC1-212ENST00000519622 JUNDP17535 347 aa6.71□□□□□ -1.34
PABPC1-212ENST00000519622 GJA5P36382 358 aa6.71□□□□□ -1.34
PABPC1-212ENST00000519622 MAGI1Q96QZ7 1491 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-212ENST00000519622 HFM1A2PYH4 1435 aa6.7□□□□□ -1.34
PABPC1-212ENST00000519622 RAPGEF6Q8TEU7 1601 aa6.7□□□□□ -1.34
PABPC1-212ENST00000519622 ADCY10Q96PN6 1610 aa6.7□□□□□ -1.34
PABPC1-212ENST00000519622 TTC24A2A3L6 582 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-212ENST00000519622 MTMR2Q13614 643 aa6.7□□□□□ -1.34
PABPC1-212ENST00000519622 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
PABPC1-212ENST00000519622 RETREG3Q86VR2 466 aa6.7□□□□□ -1.34
PABPC1-212ENST00000519622 CRIPAKQ8N1N5 446 aa6.7□□□□□ -1.34
PABPC1-212ENST00000519622 ZBTB3Q9H5J0 574 aa6.7□□□□□ -1.34
PABPC1-212ENST00000519622 NAIPQ13075 1403 aa6.69□□□□□ -1.34
PABPC1-212ENST00000519622 AKNAQ7Z591 1439 aa6.69□□□□□ -1.34
PABPC1-212ENST00000519622 NUTM2BA6NNL0 878 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-212ENST00000519622 NUTM2EB1AL46 878 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-212ENST00000519622 LILRB3O75022 631 aa6.69□□□□□ -1.34
PABPC1-212ENST00000519622 RTL5Q5HYW3 569 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-212ENST00000519622 RC3H1Q5TC82 1133 aaKnown RBP6.69□□□□□ -1.34
PABPC1-212ENST00000519622 NUTM2DQ5VT03 806 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-212ENST00000519622 NUTM2AQ8IVF1 878 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-212ENST00000519622 SNIP1Q8TAD8 396 aaKnown RBP6.69□□□□□ -1.34
PABPC1-212ENST00000519622 SYNJ2O15056 1496 aa6.68□□□□□ -1.34
PABPC1-212ENST00000519622 PRPF38BQ5VTL8 546 aaKnown RBP6.68□□□□□ -1.34
PABPC1-212ENST00000519622 DIEXFQ68CQ4 756 aaKnown RBP6.68□□□□□ -1.34
PABPC1-212ENST00000519622 NUDT12Q9BQG2 462 aa6.68□□□□□ -1.34
PABPC1-212ENST00000519622 ABCA8O94911 1581 aa6.68□□□□□ -1.34
PABPC1-212ENST00000519622 CFAP99D6REC4 459 aa6.67□□□□□ -1.34
PABPC1-212ENST00000519622 AXIN1O15169 862 aa6.67□□□□□ -1.34
PABPC1-212ENST00000519622 RFC5P40937 340 aa6.67□□□□□ -1.34
PABPC1-212ENST00000519622 TSC1Q92574 1164 aa6.67□□□□□ -1.34
PABPC1-212ENST00000519622 GMPR2Q9P2T1 348 aaKnown RBP6.67□□□□□ -1.34
PABPC1-212ENST00000519622 DNMT1P26358 1616 aaKnown RBP6.67□□□□□ -1.34
PABPC1-212ENST00000519622 KIF14Q15058 1648 aa6.66□□□□□ -1.34
PABPC1-212ENST00000519622 CROCC2H7BZ55 1655 aa6.66□□□□□ -1.34
PABPC1-212ENST00000519622 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-212ENST00000519622 PPP2R2DQ66LE6 453 aa6.66□□□□□ -1.34
PABPC1-212ENST00000519622 PRR7Q8TB68 274 aa6.66□□□□□ -1.34
PABPC1-212ENST00000519622 HPS1Q92902 700 aa6.66□□□□□ -1.34
PABPC1-212ENST00000519622 WNT7BP56706 349 aa6.65□□□□□ -1.34
PABPC1-212ENST00000519622 MTUS2Q5JR59 1369 aa6.65□□□□□ -1.35
PABPC1-212ENST00000519622 MIA2Q96PC5 1412 aa6.65□□□□□ -1.35
PABPC1-212ENST00000519622 SHROOM2Q13796 1616 aa6.65□□□□□ -1.35
PABPC1-212ENST00000519622 SIAH2O43255 324 aa6.64□□□□□ -1.35
PABPC1-212ENST00000519622 SH3BP2P78314 561 aa6.64□□□□□ -1.35
PABPC1-212ENST00000519622 CTC1Q2NKJ3 1217 aa6.64□□□□□ -1.35
PABPC1-212ENST00000519622 EVA1BQ9NVM1 165 aa6.64□□□□□ -1.35
PABPC1-212ENST00000519622 UACAQ9BZF9 1416 aa6.64□□□□□ -1.35
PABPC1-212ENST00000519622 SPDYE5A6NIY4 337 aa6.63□□□□□ -1.35
PABPC1-212ENST00000519622 CHD1O14646 1710 aa6.63□□□□□ -1.35
PABPC1-212ENST00000519622 AP1G2O75843 785 aa6.63□□□□□ -1.35
PABPC1-212ENST00000519622 CCNYL3P0C7X3 344 aa6.63□□□□□ -1.35
PABPC1-212ENST00000519622 ERCC6Q03468 1493 aa6.63□□□□□ -1.35
PABPC1-212ENST00000519622 NEUROD1Q13562 356 aa6.63□□□□□ -1.35
PABPC1-212ENST00000519622 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-212ENST00000519622 CDC42BPAQ5VT25 1732 aa6.63□□□□□ -1.35
PABPC1-212ENST00000519622 PLB1Q6P1J6 1458 aa6.63□□□□□ -1.35
PABPC1-212ENST00000519622 ABCC10Q5T3U5 1492 aa6.62□□□□□ -1.35
PABPC1-212ENST00000519622 C11orf95C9JLR9 678 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-212ENST00000519622 ALDH1A1P00352 501 aa6.62□□□□□ -1.35
PABPC1-212ENST00000519622 PTPRNQ16849 979 aa6.62□□□□□ -1.35
PABPC1-212ENST00000519622 UNC93B1Q9H1C4 597 aa6.62□□□□□ -1.35
PABPC1-212ENST00000519622 ADGBQ8N7X0 1667 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 ITSN2Q9NZM3 1697 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 ABCC5O15440 1437 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 ACIN1Q9UKV3 1341 aaKnown RBP6.61□□□□□ -1.35
PABPC1-212ENST00000519622 PER1O15534 1290 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms