RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 TRPC5Q9UL62 973 aaPredicted RBP10.65□□□□□ -0.7
CLK4-203ENST00000519583 BCL9LQ86UU0 1499 aa10.65□□□□□ -0.71
CLK4-203ENST00000519583 CPDO75976 1380 aa10.65□□□□□ -0.71
CLK4-203ENST00000519583 CGNL1Q0VF96 1302 aa10.64□□□□□ -0.71
CLK4-203ENST00000519583 NEFLP07196 543 aa10.64□□□□□ -0.71
CLK4-203ENST00000519583 CCDC9Q9Y3X0 531 aaKnown RBP10.64□□□□□ -0.71
CLK4-203ENST00000519583 COL14A1Q05707 1796 aaKnown RBP10.64□□□□□ -0.71
CLK4-203ENST00000519583 ILDR2Q71H61 639 aa10.63□□□□□ -0.71
CLK4-203ENST00000519583 ARHGEF25Q86VW2 580 aa10.63□□□□□ -0.71
CLK4-203ENST00000519583 STRN4Q9NRL3 753 aa10.63□□□□□ -0.71
CLK4-203ENST00000519583 PLCH1Q4KWH8 1693 aa10.63□□□□□ -0.71
CLK4-203ENST00000519583 RXRBP28702 533 aa10.63□□□□□ -0.71
CLK4-203ENST00000519583 FBLN1P23142 703 aa10.62□□□□□ -0.71
CLK4-203ENST00000519583 EVA1CP58658 441 aa10.62□□□□□ -0.71
CLK4-203ENST00000519583 USP54Q70EL1 1684 aa10.62□□□□□ -0.71
CLK4-203ENST00000519583 NFAT5O94916 1531 aa10.62□□□□□ -0.71
CLK4-203ENST00000519583 RBM6P78332 1123 aaKnown RBP10.62□□□□□ -0.71
CLK4-203ENST00000519583 KIF20BQ96Q89 1820 aa10.62□□□□□ -0.71
CLK4-203ENST00000519583 ATRNO75882 1429 aa10.62□□□□□ -0.71
CLK4-203ENST00000519583 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
CLK4-203ENST00000519583 AATKQ6ZMQ8 1374 aa10.61□□□□□ -0.71
CLK4-203ENST00000519583 VPS72Q15906 364 aa10.61□□□□□ -0.71
CLK4-203ENST00000519583 GJD4Q96KN9 370 aaPredicted RBP10.61□□□□□ -0.71
CLK4-203ENST00000519583 CAMTA1Q9Y6Y1 1673 aa10.6□□□□□ -0.71
CLK4-203ENST00000519583 AXIN2Q9Y2T1 843 aa10.6□□□□□ -0.71
CLK4-203ENST00000519583 RRS1Q15050 365 aaKnown RBP10.6□□□□□ -0.71
CLK4-203ENST00000519583 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.6□□□□□ -0.71
CLK4-203ENST00000519583 TNNT2P45379 298 aaPredicted RBP10.59□□□□□ -0.71
CLK4-203ENST00000519583 MAP3K19Q56UN5 1328 aa10.59□□□□□ -0.71
CLK4-203ENST00000519583 NRAPQ86VF7 1730 aa10.59□□□□□ -0.71
CLK4-203ENST00000519583 AMPHP49418 695 aa10.59□□□□□ -0.71
CLK4-203ENST00000519583 SALL2Q9Y467 1007 aaPredicted RBP10.59□□□□□ -0.71
CLK4-203ENST00000519583 LMO7Q8WWI1 1683 aa10.59□□□□□ -0.71
CLK4-203ENST00000519583 SMG6Q86US8 1419 aaKnown RBP10.59□□□□□ -0.71
CLK4-203ENST00000519583 CSB-PGBD3P0DP91 1061 aa10.59□□□□□ -0.71
CLK4-203ENST00000519583 LARP1Q6PKG0 1096 aaKnown RBP10.59□□□□□ -0.71
CLK4-203ENST00000519583 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
CLK4-203ENST00000519583 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
CLK4-203ENST00000519583 MORC1Q86VD1 984 aa10.58□□□□□ -0.72
CLK4-203ENST00000519583 COL5A2P05997 1499 aaPredicted RBP10.58□□□□□ -0.72
CLK4-203ENST00000519583 ADAMTS8Q9UP79 889 aa10.58□□□□□ -0.72
CLK4-203ENST00000519583 NUDCQ9Y266 331 aa10.58□□□□□ -0.72
CLK4-203ENST00000519583 NSD2O96028 1365 aa10.58□□□□□ -0.72
CLK4-203ENST00000519583 IRX6P78412 446 aaPredicted RBP10.57□□□□□ -0.72
CLK4-203ENST00000519583 WDR43Q15061 677 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLK4-203ENST00000519583 SPATA31A5Q5VU36 1347 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 SPATA31A7Q8IWB4 1347 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 INSRP06213 1382 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 LTN1O94822 1766 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 COL18A1P39060 1754 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 A0A0G2JS52 829 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 MYT1Q01538 1121 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 IP6K1Q92551 441 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 PPM1GO15355 546 aaPredicted RBP10.57□□□□□ -0.72
CLK4-203ENST00000519583 TOM1L2Q6ZVM7 507 aa10.57□□□□□ -0.72
CLK4-203ENST00000519583 LTV1Q96GA3 475 aaPredicted RBP10.57□□□□□ -0.72
CLK4-203ENST00000519583 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
CLK4-203ENST00000519583 GLI3P10071 1580 aa10.56□□□□□ -0.72
CLK4-203ENST00000519583 SPATA31A1Q5TZJ5 1347 aa10.56□□□□□ -0.72
CLK4-203ENST00000519583 HOXC9P31274 260 aa10.56□□□□□ -0.72
CLK4-203ENST00000519583 EMILIN1Q9Y6C2 1016 aa10.56□□□□□ -0.72
CLK4-203ENST00000519583 WDR17Q8IZU2 1322 aa10.56□□□□□ -0.72
CLK4-203ENST00000519583 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
CLK4-203ENST00000519583 RGPD5Q99666 1765 aa10.56□□□□□ -0.72
CLK4-203ENST00000519583 RGS12O14924 1447 aa10.55□□□□□ -0.72
CLK4-203ENST00000519583 ANKRD26Q9UPS8 1709 aa10.55□□□□□ -0.72
CLK4-203ENST00000519583 ABCC6O95255 1503 aa10.55□□□□□ -0.72
CLK4-203ENST00000519583 CDK12Q9NYV4 1490 aaPredicted RBP10.55□□□□□ -0.72
CLK4-203ENST00000519583 CRB1P82279 1406 aa10.54□□□□□ -0.72
CLK4-203ENST00000519583 ERBB3P21860 1342 aa10.54□□□□□ -0.72
CLK4-203ENST00000519583 SEPT12Q8IYM1 358 aa10.54□□□□□ -0.72
CLK4-203ENST00000519583 TCP11L2Q8N4U5 519 aa10.54□□□□□ -0.72
CLK4-203ENST00000519583 NLRP2Q9NX02 1062 aa10.54□□□□□ -0.72
CLK4-203ENST00000519583 POLKQ9UBT6 870 aa10.54□□□□□ -0.72
CLK4-203ENST00000519583 RTL1A6NKG5 1358 aa10.54□□□□□ -0.72
CLK4-203ENST00000519583 HSP90AB2PQ58FF8 381 aa10.53□□□□□ -0.72
CLK4-203ENST00000519583 FLT4P35916 1363 aa10.53□□□□□ -0.72
CLK4-203ENST00000519583 CARD10Q9BWT7 1032 aa10.52□□□□□ -0.72
CLK4-203ENST00000519583 KIF24Q5T7B8 1368 aa10.52□□□□□ -0.73
CLK4-203ENST00000519583 ONECUT3O60422 494 aaPredicted RBP10.52□□□□□ -0.73
CLK4-203ENST00000519583 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
CLK4-203ENST00000519583 MAP2P11137 1827 aaKnown RBP10.52□□□□□ -0.73
CLK4-203ENST00000519583 PEAK1Q9H792 1746 aa10.52□□□□□ -0.73
CLK4-203ENST00000519583 PDE3BQ13370 1112 aa10.51□□□□□ -0.73
CLK4-203ENST00000519583 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
CLK4-203ENST00000519583 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
CLK4-203ENST00000519583 CDCA7LQ96GN5 454 aa10.51□□□□□ -0.73
CLK4-203ENST00000519583 MTHFSP49914 203 aa10.5□□□□□ -0.73
CLK4-203ENST00000519583 KRT27Q7Z3Y8 459 aa10.49□□□□□ -0.73
CLK4-203ENST00000519583 NBPF6Q5VWK0 638 aa10.49□□□□□ -0.73
CLK4-203ENST00000519583 USHBP1Q8N6Y0 703 aa10.49□□□□□ -0.73
CLK4-203ENST00000519583 NBPF4Q96M43 638 aa10.49□□□□□ -0.73
CLK4-203ENST00000519583 SOCS7O14512 581 aa10.48□□□□□ -0.73
CLK4-203ENST00000519583 THSD7AQ9UPZ6 1657 aa10.48□□□□□ -0.73
CLK4-203ENST00000519583 RNF123Q5XPI4 1314 aa10.48□□□□□ -0.73
CLK4-203ENST00000519583 CDCA7Q9BWT1 371 aaPredicted RBP10.48□□□□□ -0.73
CLK4-203ENST00000519583 APAF1O14727 1248 aa10.47□□□□□ -0.73
CLK4-203ENST00000519583 EIF4A2Q14240 407 aaKnown RBP10.47□□□□□ -0.73
CLK4-203ENST00000519583 PELP1Q8IZL8 1130 aaKnown RBP10.47□□□□□ -0.73
CLK4-203ENST00000519583 CFAP53Q96M91 514 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms