RNA–Protein interactions for RNA: ENST00000519065.5

HDAC2-205, Transcript of histone deacetylase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC2, Length 9,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-205ENST00000519065 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
HDAC2-205ENST00000519065 CLCN1P35523 988 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 DNAI2Q9GZS0 605 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 MAP3K11Q16584 847 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 DDX58O95786 925 aaKnown RBP13.63□□□□□ -0.23
HDAC2-205ENST00000519065 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
HDAC2-205ENST00000519065 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 CEP112Q8N8E3 955 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 RASSF4Q9H2L5 321 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 MSL1Q68DK7 614 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 ARFGAP3Q9NP61 516 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 ANKRD62A6NC57 917 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
HDAC2-205ENST00000519065 AIMP1Q12904 312 aaKnown RBP13.62□□□□□ -0.23
HDAC2-205ENST00000519065 GBP6Q6ZN66 633 aa13.62□□□□□ -0.23
HDAC2-205ENST00000519065 SLC4A3P48751 1232 aa13.62□□□□□ -0.23
HDAC2-205ENST00000519065 FOXD4L6Q3SYB3 417 aaPredicted RBP13.62□□□□□ -0.23
HDAC2-205ENST00000519065 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
HDAC2-205ENST00000519065 CCDC183Q5T5S1 534 aa13.62□□□□□ -0.23
HDAC2-205ENST00000519065 FOXD4L3Q6VB84 417 aaPredicted RBP13.62□□□□□ -0.23
HDAC2-205ENST00000519065 C9orf78Q9NZ63 289 aaPredicted RBP13.62□□□□□ -0.23
HDAC2-205ENST00000519065 MCM4P33991 863 aa13.62□□□□□ -0.23
HDAC2-205ENST00000519065 CCDC6Q16204 474 aa13.62□□□□□ -0.23
HDAC2-205ENST00000519065 CDK5RAP3Q96JB5 506 aa13.62□□□□□ -0.23
HDAC2-205ENST00000519065 BACH2Q9BYV9 841 aa13.61□□□□□ -0.23
HDAC2-205ENST00000519065 UPF3BQ9BZI7 483 aaKnown RBP13.61□□□□□ -0.23
HDAC2-205ENST00000519065 ALS2CR12Q96Q35 445 aa13.61□□□□□ -0.23
HDAC2-205ENST00000519065 ATAD2Q6PL18 1390 aa13.61□□□□□ -0.23
HDAC2-205ENST00000519065 NOL3O60936 208 aaKnown RBP13.61□□□□□ -0.23
HDAC2-205ENST00000519065 SPC24Q8NBT2 197 aa13.61□□□□□ -0.23
HDAC2-205ENST00000519065 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
HDAC2-205ENST00000519065 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
HDAC2-205ENST00000519065 IFFO1Q0D2I5 559 aa13.61□□□□□ -0.23
HDAC2-205ENST00000519065 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
HDAC2-205ENST00000519065 MYH10P35580 1976 aa13.61□□□□□ -0.23
HDAC2-205ENST00000519065 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
HDAC2-205ENST00000519065 KIF5BP33176 963 aa13.6□□□□□ -0.23
HDAC2-205ENST00000519065 B4GALNT4Q76KP1 1039 aa13.6□□□□□ -0.23
HDAC2-205ENST00000519065 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
HDAC2-205ENST00000519065 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
HDAC2-205ENST00000519065 STK38Q15208 465 aa13.6□□□□□ -0.23
HDAC2-205ENST00000519065 POTEJP0CG39 1038 aa13.6□□□□□ -0.23
HDAC2-205ENST00000519065 CCDC38Q502W7 563 aa13.6□□□□□ -0.23
HDAC2-205ENST00000519065 SCAND2PQ9GZW5 306 aaPredicted RBP13.6□□□□□ -0.23
HDAC2-205ENST00000519065 MYO10Q9HD67 2058 aa13.6□□□□□ -0.23
HDAC2-205ENST00000519065 SPA17Q15506 151 aa13.6□□□□□ -0.23
HDAC2-205ENST00000519065 FMNL3Q8IVF7 1028 aa13.59□□□□□ -0.23
HDAC2-205ENST00000519065 SUDS3Q9H7L9 328 aaPredicted RBP13.59□□□□□ -0.23
HDAC2-205ENST00000519065 EBAG9O00559 213 aa13.59□□□□□ -0.23
HDAC2-205ENST00000519065 FAM193AP78312 1265 aa13.59□□□□□ -0.23
HDAC2-205ENST00000519065 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■□□ 15.6
HDAC2-205ENST00000519065 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
HDAC2-205ENST00000519065 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
HDAC2-205ENST00000519065 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
HDAC2-205ENST00000519065 MRVI1Q9Y6F6 885 aa13.59□□□□□ -0.23
HDAC2-205ENST00000519065 A0A1B0GUL7 405 aa13.59□□□□□ -0.23
HDAC2-205ENST00000519065 CKAP4Q07065 602 aaKnown RBP13.58□□□□□ -0.24
HDAC2-205ENST00000519065 UVSSAQ2YD98 709 aa13.58□□□□□ -0.24
HDAC2-205ENST00000519065 CCDC150Q8NCX0 1101 aa13.58□□□□□ -0.24
HDAC2-205ENST00000519065 TRIM22Q8IYM9 498 aa13.58□□□□□ -0.24
HDAC2-205ENST00000519065 CBX1P83916 185 aa13.58□□□□□ -0.24
HDAC2-205ENST00000519065 SMG6Q86US8 1419 aaKnown RBP13.58□□□□□ -0.24
HDAC2-205ENST00000519065 NUP155O75694 1391 aa13.58□□□□□ -0.24
HDAC2-205ENST00000519065 PAFAH1B1P43034 410 aa13.58□□□□□ -0.24
HDAC2-205ENST00000519065 TERF1P54274 439 aa13.58□□□□□ -0.24
HDAC2-205ENST00000519065 KRI1Q8N9T8 703 aaKnown RBP13.58□□□□□ -0.24
HDAC2-205ENST00000519065 MPHOSPH9Q99550 1183 aa13.57□□□□□ -0.24
HDAC2-205ENST00000519065 TACC1O75410 805 aa13.57□□□□□ -0.24
HDAC2-205ENST00000519065 NAP1L3Q99457 506 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-205ENST00000519065 DDX23Q9BUQ8 820 aaKnown RBP13.57□□□□□ -0.24
HDAC2-205ENST00000519065 CEP131Q9UPN4 1083 aa13.57□□□□□ -0.24
HDAC2-205ENST00000519065 AK9Q5TCS8 1911 aa13.57□□□□□ -0.24
HDAC2-205ENST00000519065 BCCIPQ9P287 314 aaKnown RBP eCLIP13.57□□□□□ -0.24
HDAC2-205ENST00000519065 KRT32Q14532 448 aa13.57□□□□□ -0.24
HDAC2-205ENST00000519065 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
HDAC2-205ENST00000519065 RNF187Q5TA31 235 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-205ENST00000519065 OPA1O60313 960 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 USO1O60763 962 aaKnown RBP13.56□□□□□ -0.24
HDAC2-205ENST00000519065 STIM2Q9P246 746 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 WASF1Q92558 559 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 FAM114A2Q9NRY5 505 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 ME1P48163 572 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 WWC2Q6AWC2 1192 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC2-205ENST00000519065 CTCFLQ8NI51 663 aaPredicted RBP13.56□□□□□ -0.24
HDAC2-205ENST00000519065 SENP3-EIF4A1A0A087X0R7 540 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 CCDC110Q8TBZ0 833 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 FIBPO43427 364 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC2-205ENST00000519065 PYM1Q9BRP8 204 aaKnown RBP13.56□□□□□ -0.24
HDAC2-205ENST00000519065 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
HDAC2-205ENST00000519065 GNAI1P63096 354 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 CCDC158Q5M9N0 1113 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 IFT74Q96LB3 600 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 ANO10Q9NW15 660 aa13.56□□□□□ -0.24
HDAC2-205ENST00000519065 LMAN1P49257 510 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms