RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 MAP4K5Q9Y4K4 846 aa10.72□□□□□ -0.69
SQLE-203ENST00000518931 ADH1CP00326 375 aa10.71□□□□□ -0.69
SQLE-203ENST00000518931 SMPD1P17405 629 aa10.71□□□□□ -0.69
SQLE-203ENST00000518931 ZNF592Q92610 1267 aa10.71□□□□□ -0.69
SQLE-203ENST00000518931 IRX2Q9BZI1 471 aaPredicted RBP10.71□□□□□ -0.69
SQLE-203ENST00000518931 SOX11P35716 441 aa10.7□□□□□ -0.7
SQLE-203ENST00000518931 NBPF20Q3BBV1 942 aa10.7□□□□□ -0.7
SQLE-203ENST00000518931 HDGFL1Q5TGJ6 251 aa10.7□□□□□ -0.7
SQLE-203ENST00000518931 ALG2Q9H553 416 aa10.7□□□□□ -0.7
SQLE-203ENST00000518931 CEP126Q9P2H0 1117 aa10.7□□□□□ -0.7
SQLE-203ENST00000518931 NRG2O14511 850 aaPredicted RBP10.69□□□□□ -0.7
SQLE-203ENST00000518931 GIGYF1O75420 1035 aaPredicted RBP10.69□□□□□ -0.7
SQLE-203ENST00000518931 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
SQLE-203ENST00000518931 FSHRP23945 695 aa10.68□□□□□ -0.7
SQLE-203ENST00000518931 RAB15P59190 212 aa10.68□□□□□ -0.7
SQLE-203ENST00000518931 NR5A1Q13285 461 aa10.68□□□□□ -0.7
SQLE-203ENST00000518931 LAPTM4AQ15012 233 aa10.68□□□□□ -0.7
SQLE-203ENST00000518931 NNTQ13423 1086 aa10.67□□□□□ -0.7
SQLE-203ENST00000518931 ADAMTS19Q8TE59 1207 aa10.67□□□□□ -0.7
SQLE-203ENST00000518931 NR3C2P08235 984 aa10.66□□□□□ -0.7
SQLE-203ENST00000518931 HPS1Q92902 700 aa10.66□□□□□ -0.7
SQLE-203ENST00000518931 ESPNB1AK53 854 aa10.65□□□□□ -0.7
SQLE-203ENST00000518931 INTS6LQ5JSJ4 861 aaKnown RBP10.65□□□□□ -0.7
SQLE-203ENST00000518931 GLMNQ92990 594 aa10.65□□□□□ -0.7
SQLE-203ENST00000518931 DGAT1O75907 488 aa10.64□□□□□ -0.71
SQLE-203ENST00000518931 SLFNL1Q499Z3 407 aa10.64□□□□□ -0.71
SQLE-203ENST00000518931 PKDCCQ504Y2 493 aa10.64□□□□□ -0.71
SQLE-203ENST00000518931 CCDC116Q8IYX3 515 aa10.64□□□□□ -0.71
SQLE-203ENST00000518931 CALR3Q96L12 384 aaKnown RBP10.64□□□□□ -0.71
SQLE-203ENST00000518931 RNF20Q5VTR2 975 aa10.63□□□□□ -0.71
SQLE-203ENST00000518931 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
SQLE-203ENST00000518931 ARID3CA6NKF2 412 aa10.62□□□□□ -0.71
SQLE-203ENST00000518931 PHTF2Q8N3S3 785 aa10.62□□□□□ -0.71
SQLE-203ENST00000518931 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
SQLE-203ENST00000518931 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
SQLE-203ENST00000518931 PPP1R26Q5T8A7 1209 aaPredicted RBP10.61□□□□□ -0.71
SQLE-203ENST00000518931 TSGA10IPQ3SY00 556 aa10.6□□□□□ -0.71
SQLE-203ENST00000518931 RNF135Q8IUD6 432 aa10.6□□□□□ -0.71
SQLE-203ENST00000518931 TMPRSS4Q9NRS4 437 aa10.6□□□□□ -0.71
SQLE-203ENST00000518931 PIK3CDO00329 1044 aa10.59□□□□□ -0.71
SQLE-203ENST00000518931 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
SQLE-203ENST00000518931 KLF16Q9BXK1 252 aaPredicted RBP10.59□□□□□ -0.71
SQLE-203ENST00000518931 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
SQLE-203ENST00000518931 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
SQLE-203ENST00000518931 ZIC2O95409 532 aaPredicted RBP10.58□□□□□ -0.72
SQLE-203ENST00000518931 AVPP01185 164 aa10.58□□□□□ -0.72
SQLE-203ENST00000518931 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
SQLE-203ENST00000518931 ITPKCQ96DU7 683 aa10.58□□□□□ -0.72
SQLE-203ENST00000518931 CCDC85AQ96PX6 553 aaPredicted RBP10.58□□□□□ -0.72
SQLE-203ENST00000518931 PGPEP1Q9NXJ5 209 aa10.57□□□□□ -0.72
SQLE-203ENST00000518931 PCDHB11Q9Y5F2 797 aa10.57□□□□□ -0.72
SQLE-203ENST00000518931 SKIP12755 728 aa10.56□□□□□ -0.72
SQLE-203ENST00000518931 TIMP2P16035 220 aa10.56□□□□□ -0.72
SQLE-203ENST00000518931 Q6ZNB5 142 aa10.56□□□□□ -0.72
SQLE-203ENST00000518931 UCN2Q96RP3 112 aa10.56□□□□□ -0.72
SQLE-203ENST00000518931 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
SQLE-203ENST00000518931 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
SQLE-203ENST00000518931 CAPN5O15484 640 aaPredicted RBP10.55□□□□□ -0.72
SQLE-203ENST00000518931 MYT1Q01538 1121 aa10.55□□□□□ -0.72
SQLE-203ENST00000518931 TBC1D9Q6ZT07 1266 aa10.55□□□□□ -0.72
SQLE-203ENST00000518931 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
SQLE-203ENST00000518931 CHIC2Q9UKJ5 165 aa10.55□□□□□ -0.72
SQLE-203ENST00000518931 PLPP7Q8NBV4 271 aa10.54□□□□□ -0.72
SQLE-203ENST00000518931 CYLDQ9NQC7 956 aa10.54□□□□□ -0.72
SQLE-203ENST00000518931 TFIP11Q9UBB9 837 aaKnown RBP10.54□□□□□ -0.72
SQLE-203ENST00000518931 DOLKQ9UPQ8 538 aa10.54□□□□□ -0.72
SQLE-203ENST00000518931 AXIN1O15169 862 aa10.53□□□□□ -0.72
SQLE-203ENST00000518931 CTC1Q2NKJ3 1217 aa10.53□□□□□ -0.72
SQLE-203ENST00000518931 MAP7D1Q3KQU3 841 aa10.53□□□□□ -0.72
SQLE-203ENST00000518931 NFATC2IPQ8NCF5 419 aa10.53□□□□□ -0.72
SQLE-203ENST00000518931 LILRA1O75019 489 aa10.52□□□□□ -0.73
SQLE-203ENST00000518931 TRAF7Q6Q0C0 670 aa10.52□□□□□ -0.73
SQLE-203ENST00000518931 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
SQLE-203ENST00000518931 ESF1Q9H501 851 aaKnown RBP10.52□□□□□ -0.73
SQLE-203ENST00000518931 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
SQLE-203ENST00000518931 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
SQLE-203ENST00000518931 ST8SIA5O15466 376 aa10.51□□□□□ -0.73
SQLE-203ENST00000518931 ATP9BO43861 1147 aa10.51□□□□□ -0.73
SQLE-203ENST00000518931 ADD1P35611 737 aaKnown RBP10.51□□□□□ -0.73
SQLE-203ENST00000518931 SMCPP49901 116 aaPredicted RBP10.51□□□□□ -0.73
SQLE-203ENST00000518931 CBLBQ13191 982 aa10.51□□□□□ -0.73
SQLE-203ENST00000518931 OXLD1Q5BKU9 147 aa10.51□□□□□ -0.73
SQLE-203ENST00000518931 PPP1R12CQ9BZL4 782 aa10.51□□□□□ -0.73
SQLE-203ENST00000518931 AAASQ9NRG9 546 aa10.51□□□□□ -0.73
SQLE-203ENST00000518931 SCTRP47872 440 aa10.5□□□□□ -0.73
SQLE-203ENST00000518931 USP4Q13107 963 aa10.5□□□□□ -0.73
SQLE-203ENST00000518931 CC2D2BQ6DHV5 1058 aa10.5□□□□□ -0.73
SQLE-203ENST00000518931 DEPDC4Q8N2C3 294 aa10.5□□□□□ -0.73
SQLE-203ENST00000518931 ERVK-9P63128 1117 aa10.49□□□□□ -0.73
SQLE-203ENST00000518931 CRIPAKQ8N1N5 446 aa10.49□□□□□ -0.73
SQLE-203ENST00000518931 CCDC97Q96F63 343 aaPredicted RBP10.49□□□□□ -0.73
SQLE-203ENST00000518931 USP17L5A8MUK1 530 aa10.48□□□□□ -0.73
SQLE-203ENST00000518931 MYCP01106 439 aaPredicted RBP10.48□□□□□ -0.73
SQLE-203ENST00000518931 Q6ZVU0 165 aa10.48□□□□□ -0.73
SQLE-203ENST00000518931 LZTS3O60299 673 aaPredicted RBP10.47□□□□□ -0.73
SQLE-203ENST00000518931 LMOD1P29536 600 aaPredicted RBP10.47□□□□□ -0.73
SQLE-203ENST00000518931 NCOA4Q13772 614 aa10.47□□□□□ -0.73
SQLE-203ENST00000518931 SIRT1Q96EB6 747 aa10.47□□□□□ -0.73
SQLE-203ENST00000518931 DACH1Q9UI36 760 aa10.47□□□□□ -0.73
SQLE-203ENST00000518931 SERPINA10Q9UK55 444 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms