RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 LRRC37A3O60309 1634 aa20■□□□□ 0.79
TSNARE1-203ENST00000518928 PARP4Q9UKK3 1724 aaKnown RBP19.99■□□□□ 0.79
TSNARE1-203ENST00000518928 USP54Q70EL1 1684 aa19.99■□□□□ 0.79
TSNARE1-203ENST00000518928 USP31Q70CQ4 1352 aa19.98■□□□□ 0.79
TSNARE1-203ENST00000518928 PSDA5PKW4 1024 aaPredicted RBP19.98■□□□□ 0.79
TSNARE1-203ENST00000518928 WNK3Q9BYP7 1800 aa19.97■□□□□ 0.79
TSNARE1-203ENST00000518928 BAG6P46379 1132 aa19.97■□□□□ 0.79
TSNARE1-203ENST00000518928 EZH2Q15910 746 aaKnown RBP19.97■□□□□ 0.79
TSNARE1-203ENST00000518928 TOM1L2Q6ZVM7 507 aa19.97■□□□□ 0.79
TSNARE1-203ENST00000518928 PEAK1Q9H792 1746 aa19.96■□□□□ 0.79
TSNARE1-203ENST00000518928 PTF1AQ7RTS3 328 aa19.96■□□□□ 0.79
TSNARE1-203ENST00000518928 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
TSNARE1-203ENST00000518928 USP47Q96K76 1375 aa19.95■□□□□ 0.79
TSNARE1-203ENST00000518928 DISP2A7MBM2 1401 aa19.95■□□□□ 0.78
TSNARE1-203ENST00000518928 EDC4Q6P2E9 1401 aaKnown RBP19.95■□□□□ 0.78
TSNARE1-203ENST00000518928 FBLN1P23142 703 aa19.95■□□□□ 0.78
TSNARE1-203ENST00000518928 PDE3BQ13370 1112 aa19.95■□□□□ 0.78
TSNARE1-203ENST00000518928 FAM196AQ6ZSG2 479 aa19.95■□□□□ 0.78
TSNARE1-203ENST00000518928 OVOS2A0A0J9YW53 1432 aa19.94■□□□□ 0.78
TSNARE1-203ENST00000518928 OVOS2Q6IE36 1432 aa19.94■□□□□ 0.78
TSNARE1-203ENST00000518928 KCNH5Q8NCM2 988 aa19.94■□□□□ 0.78
TSNARE1-203ENST00000518928 CAMKK2Q96RR4 588 aa19.94■□□□□ 0.78
TSNARE1-203ENST00000518928 THRAP3Q9Y2W1 955 aaKnown RBP19.94■□□□□ 0.78
TSNARE1-203ENST00000518928 LTN1O94822 1766 aa19.93■□□□□ 0.78
TSNARE1-203ENST00000518928 HDGFL2Q7Z4V5 671 aaPredicted RBP19.93■□□□□ 0.78
TSNARE1-203ENST00000518928 APBA3O96018 575 aa19.91■□□□□ 0.78
TSNARE1-203ENST00000518928 CSB-PGBD3P0DP91 1061 aa19.9■□□□□ 0.78
TSNARE1-203ENST00000518928 MARCH10Q8NA82 808 aaPredicted RBP19.9■□□□□ 0.78
TSNARE1-203ENST00000518928 PUS7Q96PZ0 661 aaKnown RBP19.89■□□□□ 0.77
TSNARE1-203ENST00000518928 TERF2IPQ9NYB0 399 aa19.89■□□□□ 0.77
TSNARE1-203ENST00000518928 RREB1Q92766 1687 aa19.88■□□□□ 0.77
TSNARE1-203ENST00000518928 R3HDM1Q15032 1099 aaKnown RBP19.88■□□□□ 0.77
TSNARE1-203ENST00000518928 DDB1Q16531 1140 aa19.88■□□□□ 0.77
TSNARE1-203ENST00000518928 CARD10Q9BWT7 1032 aa19.88■□□□□ 0.77
TSNARE1-203ENST00000518928 SBF2Q86WG5 1849 aa19.88■□□□□ 0.77
TSNARE1-203ENST00000518928 NUP188Q5SRE5 1749 aa19.88■□□□□ 0.77
TSNARE1-203ENST00000518928 ABCC6O95255 1503 aa19.87■□□□□ 0.77
TSNARE1-203ENST00000518928 ERBB3P21860 1342 aa19.87■□□□□ 0.77
TSNARE1-203ENST00000518928 OVOS2A0A0G2JMS6 1433 aa19.86■□□□□ 0.77
TSNARE1-203ENST00000518928 MYOM1P52179 1685 aa19.85■□□□□ 0.77
TSNARE1-203ENST00000518928 ANKRD36BQ8N2N9 1353 aa19.84■□□□□ 0.77
TSNARE1-203ENST00000518928 ANKRD24Q8TF21 1146 aa19.84■□□□□ 0.77
TSNARE1-203ENST00000518928 NLRP2Q9NX02 1062 aa19.83■□□□□ 0.77
TSNARE1-203ENST00000518928 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.76
TSNARE1-203ENST00000518928 MAP3K19Q56UN5 1328 aa19.82■□□□□ 0.76
TSNARE1-203ENST00000518928 GGNBP2Q9H3C7 697 aa19.82■□□□□ 0.76
TSNARE1-203ENST00000518928 LRP5O75197 1615 aa19.81■□□□□ 0.76
TSNARE1-203ENST00000518928 TMF1P82094 1093 aa19.81■□□□□ 0.76
TSNARE1-203ENST00000518928 LTV1Q96GA3 475 aaPredicted RBP19.81■□□□□ 0.76
TSNARE1-203ENST00000518928 TNS2Q63HR2 1409 aa19.81■□□□□ 0.76
TSNARE1-203ENST00000518928 CCDC7Q96M83 1385 aa19.81■□□□□ 0.76
TSNARE1-203ENST00000518928 FYB1O15117 783 aa19.8■□□□□ 0.76
TSNARE1-203ENST00000518928 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
TSNARE1-203ENST00000518928 RGPD2P0DJD1 1756 aa19.8■□□□□ 0.76
TSNARE1-203ENST00000518928 KCNQ2O43526 872 aa19.79■□□□□ 0.76
TSNARE1-203ENST00000518928 RRS1Q15050 365 aaKnown RBP19.79■□□□□ 0.76
TSNARE1-203ENST00000518928 PROM2Q8N271 834 aa19.78■□□□□ 0.76
TSNARE1-203ENST00000518928 IP6K1Q92551 441 aa19.78■□□□□ 0.76
TSNARE1-203ENST00000518928 COG3Q96JB2 828 aa19.78■□□□□ 0.76
TSNARE1-203ENST00000518928 ANO8Q9HCE9 1232 aaPredicted RBP19.77■□□□□ 0.76
TSNARE1-203ENST00000518928 FAM208AQ9UK61 1670 aaKnown RBP19.77■□□□□ 0.76
TSNARE1-203ENST00000518928 PARD3Q8TEW0 1356 aa19.76■□□□□ 0.75
TSNARE1-203ENST00000518928 EXOC5O00471 708 aa19.76■□□□□ 0.75
TSNARE1-203ENST00000518928 HOXC9P31274 260 aa19.76■□□□□ 0.75
TSNARE1-203ENST00000518928 ACSBG1Q96GR2 724 aa19.76■□□□□ 0.75
TSNARE1-203ENST00000518928 CDCA7Q9BWT1 371 aaPredicted RBP19.76■□□□□ 0.75
TSNARE1-203ENST00000518928 BCL9O00512 1426 aa19.76■□□□□ 0.75
TSNARE1-203ENST00000518928 BCL11BQ9C0K0 894 aaPredicted RBP19.75■□□□□ 0.75
TSNARE1-203ENST00000518928 KIF20BQ96Q89 1820 aa19.74■□□□□ 0.75
TSNARE1-203ENST00000518928 IL2RBP14784 551 aa19.74■□□□□ 0.75
TSNARE1-203ENST00000518928 PDGFDQ9GZP0 370 aaPredicted RBP19.73■□□□□ 0.75
TSNARE1-203ENST00000518928 NSD3Q9BZ95 1437 aa19.73■□□□□ 0.75
TSNARE1-203ENST00000518928 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
TSNARE1-203ENST00000518928 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
TSNARE1-203ENST00000518928 USHBP1Q8N6Y0 703 aa19.72■□□□□ 0.75
TSNARE1-203ENST00000518928 NHSQ6T4R5 1651 aa19.71■□□□□ 0.75
TSNARE1-203ENST00000518928 MEGF6O75095 1541 aa19.71■□□□□ 0.75
TSNARE1-203ENST00000518928 AMPHP49418 695 aa19.71■□□□□ 0.75
TSNARE1-203ENST00000518928 SHANK3Q9BYB0 1731 aa19.71■□□□□ 0.75
TSNARE1-203ENST00000518928 PLSCR1O15162 318 aa19.7■□□□□ 0.74
TSNARE1-203ENST00000518928 HSPA5P11021 654 aaKnown RBP19.7■□□□□ 0.74
TSNARE1-203ENST00000518928 SLC24A1O60721 1099 aa19.69■□□□□ 0.74
TSNARE1-203ENST00000518928 NBPF6Q5VWK0 638 aa19.69■□□□□ 0.74
TSNARE1-203ENST00000518928 NBPF4Q96M43 638 aa19.69■□□□□ 0.74
TSNARE1-203ENST00000518928 HSP90AB2PQ58FF8 381 aa19.68■□□□□ 0.74
TSNARE1-203ENST00000518928 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
TSNARE1-203ENST00000518928 EMILIN1Q9Y6C2 1016 aa19.68■□□□□ 0.74
TSNARE1-203ENST00000518928 C11orf95C9JLR9 678 aaPredicted RBP19.67■□□□□ 0.74
TSNARE1-203ENST00000518928 EIF4G2P78344 907 aaKnown RBP eCLIP19.67■□□□□ 0.74
TSNARE1-203ENST00000518928 BTAF1O14981 1849 aa19.67■□□□□ 0.74
TSNARE1-203ENST00000518928 TXNRD1Q16881 649 aa19.66■□□□□ 0.74
TSNARE1-203ENST00000518928 DDX54Q8TDD1 881 aaKnown RBP19.66■□□□□ 0.74
TSNARE1-203ENST00000518928 RTL1A6NKG5 1358 aa19.66■□□□□ 0.74
TSNARE1-203ENST00000518928 CDCA8Q53HL2 280 aa19.65■□□□□ 0.74
TSNARE1-203ENST00000518928 NBPF14Q5TI25 921 aa19.65■□□□□ 0.74
TSNARE1-203ENST00000518928 CASZ1Q86V15 1759 aa19.65■□□□□ 0.74
TSNARE1-203ENST00000518928 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
TSNARE1-203ENST00000518928 PAPPAQ13219 1627 aa19.62■□□□□ 0.73
TSNARE1-203ENST00000518928 NSD2O96028 1365 aa19.61■□□□□ 0.73
TSNARE1-203ENST00000518928 INSRP06213 1382 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms