RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 MED14O60244 1454 aa22.71■■□□□ 1.23
ARFGAP1-209ENST00000518794 RRP9O43818 475 aaKnown RBP22.71■■□□□ 1.23
ARFGAP1-209ENST00000518794 HSP90AA1P07900 732 aaKnown RBP22.71■■□□□ 1.23
ARFGAP1-209ENST00000518794 SIRT2Q8IXJ6 389 aa22.71■■□□□ 1.23
ARFGAP1-209ENST00000518794 PANK2Q9BZ23 570 aa22.71■■□□□ 1.23
ARFGAP1-209ENST00000518794 C8orf58Q8NAV2 365 aa22.71■■□□□ 1.23
ARFGAP1-209ENST00000518794 ANKRD26Q9UPS8 1709 aa22.69■■□□□ 1.22
ARFGAP1-209ENST00000518794 RICTORQ6R327 1708 aa22.69■■□□□ 1.22
ARFGAP1-209ENST00000518794 CD2BP2O95400 341 aaKnown RBP22.69■■□□□ 1.22
ARFGAP1-209ENST00000518794 RBM42Q9BTD8 480 aaKnown RBP22.69■■□□□ 1.22
ARFGAP1-209ENST00000518794 ZNF692Q9BU19 519 aaPredicted RBP22.69■■□□□ 1.22
ARFGAP1-209ENST00000518794 TRAK2O60296 914 aa22.68■■□□□ 1.22
ARFGAP1-209ENST00000518794 IL13P35225 146 aa22.68■■□□□ 1.22
ARFGAP1-209ENST00000518794 TXNDC2Q86VQ3 553 aa22.68■■□□□ 1.22
ARFGAP1-209ENST00000518794 XRCC6P12956 609 aaKnown RBP eCLIP22.68■■□□□ 1.225e-6■■□□□ 11.5
ARFGAP1-209ENST00000518794 TWISTNBQ3B726 338 aaPredicted RBP22.67■■□□□ 1.22
ARFGAP1-209ENST00000518794 KRT24Q2M2I5 525 aa22.66■■□□□ 1.22
ARFGAP1-209ENST00000518794 CLTCQ00610 1675 aaKnown RBP22.66■■□□□ 1.22
ARFGAP1-209ENST00000518794 CYB5RLQ6IPT4 315 aa22.65■■□□□ 1.22
ARFGAP1-209ENST00000518794 KIF20BQ96Q89 1820 aa22.65■■□□□ 1.22
ARFGAP1-209ENST00000518794 GOLGA6L3A6NEY3 463 aa22.65■■□□□ 1.22
ARFGAP1-209ENST00000518794 RBM25P49756 843 aaKnown RBP22.65■■□□□ 1.22
ARFGAP1-209ENST00000518794 HSP90AB1P08238 724 aaKnown RBP22.64■■□□□ 1.22
ARFGAP1-209ENST00000518794 TBC1D9Q6ZT07 1266 aa22.64■■□□□ 1.22
ARFGAP1-209ENST00000518794 KIF2CQ99661 725 aa22.64■■□□□ 1.22
ARFGAP1-209ENST00000518794 GNAI1P63096 354 aa22.64■■□□□ 1.21
ARFGAP1-209ENST00000518794 L1TD1Q5T7N2 865 aaKnown RBP22.64■■□□□ 1.21
ARFGAP1-209ENST00000518794 MAP2P11137 1827 aaKnown RBP22.63■■□□□ 1.21
ARFGAP1-209ENST00000518794 BMP2KLQ5H9B9 411 aa22.63■■□□□ 1.21
ARFGAP1-209ENST00000518794 AEBP1Q8IUX7 1158 aa22.63■■□□□ 1.21
ARFGAP1-209ENST00000518794 NUTM2FA1L443 756 aa22.62■■□□□ 1.21
ARFGAP1-209ENST00000518794 IFT57Q9NWB7 429 aa22.62■■□□□ 1.21
ARFGAP1-209ENST00000518794 WASLO00401 505 aaPredicted RBP22.61■■□□□ 1.21
ARFGAP1-209ENST00000518794 ZNF853P0CG23 659 aa22.61■■□□□ 1.21
ARFGAP1-209ENST00000518794 APBB1O00213 710 aa22.6■■□□□ 1.21
ARFGAP1-209ENST00000518794 TNPO1Q92973 898 aaKnown RBP22.6■■□□□ 1.21
ARFGAP1-209ENST00000518794 SOX12O15370 315 aa22.6■■□□□ 1.21
ARFGAP1-209ENST00000518794 C16orf71Q8IYS4 520 aaPredicted RBP22.6■■□□□ 1.21
ARFGAP1-209ENST00000518794 GCC1Q96CN9 775 aa22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 NUDT16Q96DE0 195 aaKnown RBP22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 ABCC4O15439 1325 aa22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 METP08581 1390 aa22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 FSD2A1L4K1 749 aa22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 BRPF1P55201 1214 aaPredicted RBP22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 FAM69CQ0P6D2 419 aa22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 RIMS2Q9UQ26 1411 aa22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 DDIT3P35638 169 aa22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 COG3Q96JB2 828 aa22.59■■□□□ 1.21
ARFGAP1-209ENST00000518794 PTCH1Q13635 1447 aa22.58■■□□□ 1.21
ARFGAP1-209ENST00000518794 CDC42BPGQ6DT37 1551 aa22.58■■□□□ 1.2
ARFGAP1-209ENST00000518794 CFAP44Q96MT7 982 aa22.58■■□□□ 1.2
ARFGAP1-209ENST00000518794 GSPT1P15170 499 aaKnown RBP22.57■■□□□ 1.2
ARFGAP1-209ENST00000518794 ARHGAP45Q92619 1136 aa22.57■■□□□ 1.2
ARFGAP1-209ENST00000518794 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
ARFGAP1-209ENST00000518794 CALD1Q05682 793 aaKnown RBP22.57■■□□□ 1.2
ARFGAP1-209ENST00000518794 OTUD7AQ8TE49 926 aaPredicted RBP22.57■■□□□ 1.2
ARFGAP1-209ENST00000518794 A2ML1A8K2U0 1454 aa22.56■■□□□ 1.2
ARFGAP1-209ENST00000518794 CPS1P31327 1500 aa22.56■■□□□ 1.2
ARFGAP1-209ENST00000518794 SNX21Q969T3 373 aa22.56■■□□□ 1.2
ARFGAP1-209ENST00000518794 ATP7BP35670 1465 aa22.56■■□□□ 1.2
ARFGAP1-209ENST00000518794 MCM10Q7L590 875 aa22.56■■□□□ 1.2
ARFGAP1-209ENST00000518794 NCOA3Q9Y6Q9 1424 aa22.55■■□□□ 1.2
ARFGAP1-209ENST00000518794 PIK3R4Q99570 1358 aa22.55■■□□□ 1.2
ARFGAP1-209ENST00000518794 SULT6B1Q6IMI4 303 aa22.54■■□□□ 1.2
ARFGAP1-209ENST00000518794 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
ARFGAP1-209ENST00000518794 EDC4Q6P2E9 1401 aaKnown RBP22.54■■□□□ 1.2
ARFGAP1-209ENST00000518794 CLCN1P35523 988 aa22.53■■□□□ 1.2
ARFGAP1-209ENST00000518794 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
ARFGAP1-209ENST00000518794 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
ARFGAP1-209ENST00000518794 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
ARFGAP1-209ENST00000518794 A0A0U1RQG5 324 aaPredicted RBP22.53■■□□□ 1.2
ARFGAP1-209ENST00000518794 SMARCA5O60264 1052 aaPredicted RBP22.53■■□□□ 1.2
ARFGAP1-209ENST00000518794 GAS2L2Q8NHY3 880 aa22.53■■□□□ 1.2
ARFGAP1-209ENST00000518794 MIS18AQ9NYP9 233 aa22.52■■□□□ 1.2
ARFGAP1-209ENST00000518794 PLEKHM2Q8IWE5 1019 aa22.52■■□□□ 1.2
ARFGAP1-209ENST00000518794 DDX11L8A8MPP1 907 aa22.51■■□□□ 1.19
ARFGAP1-209ENST00000518794 API5Q9BZZ5 524 aaKnown RBP22.51■■□□□ 1.19
ARFGAP1-209ENST00000518794 CCDC61Q9Y6R9 512 aa22.51■■□□□ 1.19
ARFGAP1-209ENST00000518794 PRR36Q9H6K5 1346 aa22.51■■□□□ 1.19
ARFGAP1-209ENST00000518794 SSFA2P28290 1259 aa22.5■■□□□ 1.19
ARFGAP1-209ENST00000518794 K7ELQ4 463 aaPredicted RBP22.5■■□□□ 1.19
ARFGAP1-209ENST00000518794 EIF4A2Q14240 407 aaKnown RBP22.5■■□□□ 1.19
ARFGAP1-209ENST00000518794 CDC45O75419 566 aa22.49■■□□□ 1.19
ARFGAP1-209ENST00000518794 GAS2L3Q86XJ1 694 aa22.49■■□□□ 1.19
ARFGAP1-209ENST00000518794 CDK12Q9NYV4 1490 aaPredicted RBP22.49■■□□□ 1.19
ARFGAP1-209ENST00000518794 RAB3GAP1Q15042 981 aa22.49■■□□□ 1.19
ARFGAP1-209ENST00000518794 DLG5Q8TDM6 1919 aa22.49■■□□□ 1.19
ARFGAP1-209ENST00000518794 LMOD3Q0VAK6 560 aa22.48■■□□□ 1.19
ARFGAP1-209ENST00000518794 CHMP4BQ9H444 224 aaKnown RBP22.48■■□□□ 1.19
ARFGAP1-209ENST00000518794 GRPEL1Q9HAV7 217 aa22.47■■□□□ 1.19
ARFGAP1-209ENST00000518794 KNDC1Q76NI1 1749 aa22.47■■□□□ 1.19
ARFGAP1-209ENST00000518794 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
ARFGAP1-209ENST00000518794 TSPOAP1O95153 1857 aa22.46■■□□□ 1.19
ARFGAP1-209ENST00000518794 RBM10P98175 930 aaKnown RBP22.46■■□□□ 1.19
ARFGAP1-209ENST00000518794 MEIS3Q99687 375 aa22.46■■□□□ 1.19
ARFGAP1-209ENST00000518794 DCTPP1Q9H773 170 aa22.46■■□□□ 1.19
ARFGAP1-209ENST00000518794 DLC1Q96QB1 1528 aa22.46■■□□□ 1.19
ARFGAP1-209ENST00000518794 FOXO3O43524 673 aa22.45■■□□□ 1.18
ARFGAP1-209ENST00000518794 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
ARFGAP1-209ENST00000518794 MRE11P49959 708 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms