RNA–Protein interactions for RNA: ENST00000518442.5

EIF3E-204, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

TSL 1 (best)

Gene EIF3E, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-204ENST00000518442 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
EIF3E-204ENST00000518442 GGNBP2Q9H3C7 697 aa12.33□□□□□ -0.44
EIF3E-204ENST00000518442 PANK3Q9H999 370 aa12.33□□□□□ -0.44
EIF3E-204ENST00000518442 PRDM11Q9NQV5 511 aa12.33□□□□□ -0.44
EIF3E-204ENST00000518442 USP21Q9UK80 565 aa12.33□□□□□ -0.44
EIF3E-204ENST00000518442 EDC4Q6P2E9 1401 aaKnown RBP12.33□□□□□ -0.44
EIF3E-204ENST00000518442 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
EIF3E-204ENST00000518442 TTC21AQ8NDW8 1320 aa12.33□□□□□ -0.44
EIF3E-204ENST00000518442 GCP02774 474 aa12.32□□□□□ -0.44
EIF3E-204ENST00000518442 FBLN1P23142 703 aa12.32□□□□□ -0.44
EIF3E-204ENST00000518442 ILDR2Q71H61 639 aa12.32□□□□□ -0.44
EIF3E-204ENST00000518442 PHRF1Q9P1Y6 1649 aaKnown RBP12.32□□□□□ -0.44
EIF3E-204ENST00000518442 USP19O94966 1318 aa12.32□□□□□ -0.44
EIF3E-204ENST00000518442 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
EIF3E-204ENST00000518442 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
EIF3E-204ENST00000518442 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
EIF3E-204ENST00000518442 BRD4O60885 1362 aaPredicted RBP12.3□□□□□ -0.44
EIF3E-204ENST00000518442 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
EIF3E-204ENST00000518442 QTRT2Q9H974 415 aaKnown RBP12.3□□□□□ -0.44
EIF3E-204ENST00000518442 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
EIF3E-204ENST00000518442 CCDC9Q9Y3X0 531 aaKnown RBP12.3□□□□□ -0.44
EIF3E-204ENST00000518442 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
EIF3E-204ENST00000518442 FYB1O15117 783 aa12.29□□□□□ -0.44
EIF3E-204ENST00000518442 ZNF772Q68DY9 489 aaPredicted RBP12.29□□□□□ -0.44
EIF3E-204ENST00000518442 COG3Q96JB2 828 aa12.29□□□□□ -0.44
EIF3E-204ENST00000518442 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
EIF3E-204ENST00000518442 TNNT2P45379 298 aaPredicted RBP12.28□□□□□ -0.44
EIF3E-204ENST00000518442 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
EIF3E-204ENST00000518442 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
EIF3E-204ENST00000518442 BCL9LQ86UU0 1499 aa12.27□□□□□ -0.44
EIF3E-204ENST00000518442 PLCH1Q4KWH8 1693 aa12.27□□□□□ -0.45
EIF3E-204ENST00000518442 UNC5CLQ8IV45 518 aa12.27□□□□□ -0.45
EIF3E-204ENST00000518442 SLIT3O75094 1523 aa12.27□□□□□ -0.45
EIF3E-204ENST00000518442 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
EIF3E-204ENST00000518442 KCNH5Q8NCM2 988 aa12.26□□□□□ -0.45
EIF3E-204ENST00000518442 USP35Q9P2H5 1018 aa12.26□□□□□ -0.45
EIF3E-204ENST00000518442 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
EIF3E-204ENST00000518442 OVOS2A0A0J9YW53 1432 aa12.26□□□□□ -0.45
EIF3E-204ENST00000518442 OVOS2Q6IE36 1432 aa12.26□□□□□ -0.45
EIF3E-204ENST00000518442 SLIT2O94813 1529 aa12.26□□□□□ -0.45
EIF3E-204ENST00000518442 EVA1CP58658 441 aa12.25□□□□□ -0.45
EIF3E-204ENST00000518442 TRPC5Q9UL62 973 aaPredicted RBP12.25□□□□□ -0.45
EIF3E-204ENST00000518442 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
EIF3E-204ENST00000518442 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
EIF3E-204ENST00000518442 COL14A1Q05707 1796 aaKnown RBP12.25□□□□□ -0.45
EIF3E-204ENST00000518442 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
EIF3E-204ENST00000518442 NFAT5O94916 1531 aa12.24□□□□□ -0.45
EIF3E-204ENST00000518442 RXRBP28702 533 aa12.24□□□□□ -0.45
EIF3E-204ENST00000518442 ARHGEF25Q86VW2 580 aa12.24□□□□□ -0.45
EIF3E-204ENST00000518442 KNSTRNQ9Y448 316 aa12.24□□□□□ -0.45
EIF3E-204ENST00000518442 CAMTA1Q9Y6Y1 1673 aa12.23□□□□□ -0.45
EIF3E-204ENST00000518442 CPDO75976 1380 aa12.23□□□□□ -0.45
EIF3E-204ENST00000518442 A0A0G2JS52 829 aa12.23□□□□□ -0.45
EIF3E-204ENST00000518442 MYT1Q01538 1121 aa12.23□□□□□ -0.45
EIF3E-204ENST00000518442 CC2D1BQ5T0F9 858 aaKnown RBP12.23□□□□□ -0.45
EIF3E-204ENST00000518442 LARP1Q6PKG0 1096 aaKnown RBP12.23□□□□□ -0.45
EIF3E-204ENST00000518442 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
EIF3E-204ENST00000518442 ATRNO75882 1429 aa12.22□□□□□ -0.45
EIF3E-204ENST00000518442 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
EIF3E-204ENST00000518442 CSB-PGBD3P0DP91 1061 aa12.22□□□□□ -0.45
EIF3E-204ENST00000518442 RBM6P78332 1123 aaKnown RBP12.22□□□□□ -0.45
EIF3E-204ENST00000518442 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
EIF3E-204ENST00000518442 RGPD5Q99666 1765 aa12.21□□□□□ -0.45
EIF3E-204ENST00000518442 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.45
EIF3E-204ENST00000518442 NRAPQ86VF7 1730 aa12.21□□□□□ -0.45
EIF3E-204ENST00000518442 AMPHP49418 695 aa12.21□□□□□ -0.45
EIF3E-204ENST00000518442 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
EIF3E-204ENST00000518442 VPS72Q15906 364 aa12.21□□□□□ -0.45
EIF3E-204ENST00000518442 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
EIF3E-204ENST00000518442 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
EIF3E-204ENST00000518442 LTN1O94822 1766 aa12.2□□□□□ -0.46
EIF3E-204ENST00000518442 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
EIF3E-204ENST00000518442 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
EIF3E-204ENST00000518442 MORC1Q86VD1 984 aa12.2□□□□□ -0.46
EIF3E-204ENST00000518442 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
EIF3E-204ENST00000518442 LMO7Q8WWI1 1683 aa12.19□□□□□ -0.46
EIF3E-204ENST00000518442 AATKQ6ZMQ8 1374 aa12.19□□□□□ -0.46
EIF3E-204ENST00000518442 GLI3P10071 1580 aa12.19□□□□□ -0.46
EIF3E-204ENST00000518442 PER1O15534 1290 aaPredicted RBP12.19□□□□□ -0.46
EIF3E-204ENST00000518442 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
EIF3E-204ENST00000518442 TOM1L2Q6ZVM7 507 aa12.19□□□□□ -0.46
EIF3E-204ENST00000518442 COL18A1P39060 1754 aa12.19□□□□□ -0.46
EIF3E-204ENST00000518442 COL5A2P05997 1499 aaPredicted RBP12.19□□□□□ -0.46
EIF3E-204ENST00000518442 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.18□□□□□ -0.46
EIF3E-204ENST00000518442 ANKRD24Q8TF21 1146 aa12.18□□□□□ -0.46
EIF3E-204ENST00000518442 RGS12O14924 1447 aa12.18□□□□□ -0.46
EIF3E-204ENST00000518442 SPATA31A5Q5VU36 1347 aa12.17□□□□□ -0.46
EIF3E-204ENST00000518442 SPATA31A7Q8IWB4 1347 aa12.17□□□□□ -0.46
EIF3E-204ENST00000518442 HOXC9P31274 260 aa12.17□□□□□ -0.46
EIF3E-204ENST00000518442 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
EIF3E-204ENST00000518442 NLRP2Q9NX02 1062 aa12.17□□□□□ -0.46
EIF3E-204ENST00000518442 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
EIF3E-204ENST00000518442 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
EIF3E-204ENST00000518442 IP6K1Q92551 441 aa12.16□□□□□ -0.46
EIF3E-204ENST00000518442 WDR17Q8IZU2 1322 aa12.15□□□□□ -0.46
EIF3E-204ENST00000518442 PEAK1Q9H792 1746 aa12.15□□□□□ -0.46
EIF3E-204ENST00000518442 FAM182BQ5T319 152 aa12.15□□□□□ -0.46
EIF3E-204ENST00000518442 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
EIF3E-204ENST00000518442 POLKQ9UBT6 870 aa12.15□□□□□ -0.46
EIF3E-204ENST00000518442 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms