RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
VIRMA-203ENST00000517624 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
VIRMA-203ENST00000517624 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
VIRMA-203ENST00000517624 MON2Q7Z3U7 1717 aa12.48□□□□□ -0.41
VIRMA-203ENST00000517624 NSD3Q9BZ95 1437 aa12.48□□□□□ -0.41
VIRMA-203ENST00000517624 NPHP3Q7Z494 1330 aa12.48□□□□□ -0.41
VIRMA-203ENST00000517624 PSME1Q06323 249 aa12.48□□□□□ -0.41
VIRMA-203ENST00000517624 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
VIRMA-203ENST00000517624 CC2D1BQ5T0F9 858 aaKnown RBP12.48□□□□□ -0.41
VIRMA-203ENST00000517624 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
VIRMA-203ENST00000517624 KRT28Q7Z3Y7 464 aa12.47□□□□□ -0.41
VIRMA-203ENST00000517624 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
VIRMA-203ENST00000517624 C7P10643 843 aa12.46□□□□□ -0.41
VIRMA-203ENST00000517624 DDX17Q92841 729 aaKnown RBP12.46□□□□□ -0.41
VIRMA-203ENST00000517624 NRKQ7Z2Y5 1582 aa12.46□□□□□ -0.42
VIRMA-203ENST00000517624 PXDNQ92626 1479 aa12.46□□□□□ -0.42
VIRMA-203ENST00000517624 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
VIRMA-203ENST00000517624 NHSL1Q5SYE7 1610 aa12.45□□□□□ -0.42
VIRMA-203ENST00000517624 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
VIRMA-203ENST00000517624 CGNL1Q0VF96 1302 aa12.45□□□□□ -0.42
VIRMA-203ENST00000517624 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
VIRMA-203ENST00000517624 FYB1O15117 783 aa12.45□□□□□ -0.42
VIRMA-203ENST00000517624 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
VIRMA-203ENST00000517624 PIP4K2BP78356 416 aa12.44□□□□□ -0.42
VIRMA-203ENST00000517624 XPCQ01831 940 aaPredicted RBP12.44□□□□□ -0.42
VIRMA-203ENST00000517624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.44□□□□□ -0.42
VIRMA-203ENST00000517624 RBM19Q9Y4C8 960 aaKnown RBP12.44□□□□□ -0.42
VIRMA-203ENST00000517624 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
VIRMA-203ENST00000517624 TRPM3Q9HCF6 1732 aaPredicted RBP12.43□□□□□ -0.42
VIRMA-203ENST00000517624 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
VIRMA-203ENST00000517624 PPP2R1AP30153 589 aa12.43□□□□□ -0.42
VIRMA-203ENST00000517624 AHDC1Q5TGY3 1603 aaPredicted RBP12.43□□□□□ -0.42
VIRMA-203ENST00000517624 NSD2O96028 1365 aa12.43□□□□□ -0.42
VIRMA-203ENST00000517624 NME9Q86XW9 330 aa12.42□□□□□ -0.42
VIRMA-203ENST00000517624 USP31Q70CQ4 1352 aa12.42□□□□□ -0.42
VIRMA-203ENST00000517624 SPATA31A3Q5VYP0 1347 aa12.41□□□□□ -0.42
VIRMA-203ENST00000517624 RRP1P56182 461 aaKnown RBP12.41□□□□□ -0.42
VIRMA-203ENST00000517624 WDR43Q15061 677 aaKnown RBP eCLIP12.41□□□□□ -0.42
VIRMA-203ENST00000517624 TNS3Q68CZ2 1445 aa12.4□□□□□ -0.42
VIRMA-203ENST00000517624 ATN1P54259 1190 aaPredicted RBP12.4□□□□□ -0.42
VIRMA-203ENST00000517624 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
VIRMA-203ENST00000517624 ABTB2Q8N961 1025 aa12.4□□□□□ -0.42
VIRMA-203ENST00000517624 GGNBP2Q9H3C7 697 aa12.4□□□□□ -0.42
VIRMA-203ENST00000517624 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
VIRMA-203ENST00000517624 PIK3C2AO00443 1686 aa12.4□□□□□ -0.42
VIRMA-203ENST00000517624 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
VIRMA-203ENST00000517624 ALS2Q96Q42 1657 aa12.39□□□□□ -0.43
VIRMA-203ENST00000517624 OVOS2A0A0J9YW53 1432 aa12.39□□□□□ -0.43
VIRMA-203ENST00000517624 OVOS2Q6IE36 1432 aa12.39□□□□□ -0.43
VIRMA-203ENST00000517624 B4GALNT3Q6L9W6 998 aa12.39□□□□□ -0.43
VIRMA-203ENST00000517624 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
VIRMA-203ENST00000517624 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
VIRMA-203ENST00000517624 POTEFA5A3E0 1075 aa12.38□□□□□ -0.43
VIRMA-203ENST00000517624 NLRP6P59044 892 aa12.38□□□□□ -0.43
VIRMA-203ENST00000517624 MORC1Q86VD1 984 aa12.38□□□□□ -0.43
VIRMA-203ENST00000517624 LRRC59Q96AG4 307 aaKnown RBP12.38□□□□□ -0.43
VIRMA-203ENST00000517624 COG3Q96JB2 828 aa12.38□□□□□ -0.43
VIRMA-203ENST00000517624 USP54Q70EL1 1684 aa12.38□□□□□ -0.43
VIRMA-203ENST00000517624 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
VIRMA-203ENST00000517624 ANKRD26Q9UPS8 1709 aa12.37□□□□□ -0.43
VIRMA-203ENST00000517624 ARHGEF10O15013 1369 aa12.37□□□□□ -0.43
VIRMA-203ENST00000517624 PHLPP1O60346 1717 aa12.37□□□□□ -0.43
VIRMA-203ENST00000517624 USP19O94966 1318 aa12.37□□□□□ -0.43
VIRMA-203ENST00000517624 NUTM2GQ5VZR2 741 aa12.36□□□□□ -0.43
VIRMA-203ENST00000517624 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
VIRMA-203ENST00000517624 CCDC136Q96JN2 1154 aa12.36□□□□□ -0.43
VIRMA-203ENST00000517624 MARF1Q9Y4F3 1742 aaKnown RBP12.36□□□□□ -0.43
VIRMA-203ENST00000517624 ZNF521Q96K83 1311 aa12.35□□□□□ -0.43
VIRMA-203ENST00000517624 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
VIRMA-203ENST00000517624 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
VIRMA-203ENST00000517624 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
VIRMA-203ENST00000517624 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
VIRMA-203ENST00000517624 PNPLA6Q8IY17 1366 aa12.33□□□□□ -0.44
VIRMA-203ENST00000517624 SLIT3O75094 1523 aa12.33□□□□□ -0.44
VIRMA-203ENST00000517624 HSPA1LP34931 641 aa12.33□□□□□ -0.44
VIRMA-203ENST00000517624 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
VIRMA-203ENST00000517624 GCP02774 474 aa12.32□□□□□ -0.44
VIRMA-203ENST00000517624 FBLN1P23142 703 aa12.32□□□□□ -0.44
VIRMA-203ENST00000517624 TNNT2P45379 298 aaPredicted RBP12.32□□□□□ -0.44
VIRMA-203ENST00000517624 KCNH5Q8NCM2 988 aa12.32□□□□□ -0.44
VIRMA-203ENST00000517624 TRPC6Q9Y210 931 aa12.32□□□□□ -0.44
VIRMA-203ENST00000517624 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
VIRMA-203ENST00000517624 COL22A1Q8NFW1 1626 aaPredicted RBP12.31□□□□□ -0.44
VIRMA-203ENST00000517624 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
VIRMA-203ENST00000517624 FBXO41Q8TF61 875 aa12.31□□□□□ -0.44
VIRMA-203ENST00000517624 SHPRHQ149N8 1683 aa12.31□□□□□ -0.44
VIRMA-203ENST00000517624 NFAT5O94916 1531 aa12.31□□□□□ -0.44
VIRMA-203ENST00000517624 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
VIRMA-203ENST00000517624 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
VIRMA-203ENST00000517624 ANP32EQ9BTT0 268 aa12.3□□□□□ -0.44
VIRMA-203ENST00000517624 POLKQ9UBT6 870 aa12.3□□□□□ -0.44
VIRMA-203ENST00000517624 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
VIRMA-203ENST00000517624 JCADQ9P266 1359 aa12.3□□□□□ -0.44
VIRMA-203ENST00000517624 SOX12O15370 315 aa12.29□□□□□ -0.44
VIRMA-203ENST00000517624 MTHFSP49914 203 aa12.29□□□□□ -0.44
VIRMA-203ENST00000517624 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
VIRMA-203ENST00000517624 PHRF1Q9P1Y6 1649 aaKnown RBP12.29□□□□□ -0.44
VIRMA-203ENST00000517624 MAP2P11137 1827 aaKnown RBP12.28□□□□□ -0.44
VIRMA-203ENST00000517624 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
VIRMA-203ENST00000517624 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms