RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
CSGALNACT1-204ENST00000517494 PTF1AQ7RTS3 328 aa21.83■■□□□ 1.09
CSGALNACT1-204ENST00000517494 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
CSGALNACT1-204ENST00000517494 YY1P25490 414 aa21.82■■□□□ 1.08
CSGALNACT1-204ENST00000517494 KCNH5Q8NCM2 988 aa21.82■■□□□ 1.08
CSGALNACT1-204ENST00000517494 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
CSGALNACT1-204ENST00000517494 ARHGEF25Q86VW2 580 aa21.81■■□□□ 1.08
CSGALNACT1-204ENST00000517494 MARCH10Q8NA82 808 aaPredicted RBP21.81■■□□□ 1.08
CSGALNACT1-204ENST00000517494 ANO8Q9HCE9 1232 aaPredicted RBP21.81■■□□□ 1.08
CSGALNACT1-204ENST00000517494 PEAK1Q9H792 1746 aa21.8■■□□□ 1.08
CSGALNACT1-204ENST00000517494 DCAF8L1A6NGE4 600 aa21.8■■□□□ 1.08
CSGALNACT1-204ENST00000517494 PLSCR1O15162 318 aa21.8■■□□□ 1.08
CSGALNACT1-204ENST00000517494 ZNF692Q9BU19 519 aaPredicted RBP21.8■■□□□ 1.08
CSGALNACT1-204ENST00000517494 CDCA7Q9BWT1 371 aaPredicted RBP21.8■■□□□ 1.08
CSGALNACT1-204ENST00000517494 TRPM1Q7Z4N2 1603 aa21.79■■□□□ 1.08
CSGALNACT1-204ENST00000517494 TTC21AQ8NDW8 1320 aa21.78■■□□□ 1.08
CSGALNACT1-204ENST00000517494 KTN1Q86UP2 1357 aaKnown RBP21.77■■□□□ 1.08
CSGALNACT1-204ENST00000517494 COL18A1P39060 1754 aa21.77■■□□□ 1.08
CSGALNACT1-204ENST00000517494 CARD10Q9BWT7 1032 aa21.77■■□□□ 1.08
CSGALNACT1-204ENST00000517494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.76■■□□□ 1.074e-6■■■■□ 20.3
CSGALNACT1-204ENST00000517494 EXOC5O00471 708 aa21.75■■□□□ 1.07
CSGALNACT1-204ENST00000517494 ZBTB7AO95365 584 aa21.75■■□□□ 1.07
CSGALNACT1-204ENST00000517494 NINLQ9Y2I6 1382 aa21.74■■□□□ 1.07
CSGALNACT1-204ENST00000517494 PDGFDQ9GZP0 370 aaPredicted RBP21.74■■□□□ 1.07
CSGALNACT1-204ENST00000517494 STK32BQ9NY57 414 aa21.73■■□□□ 1.07
CSGALNACT1-204ENST00000517494 WNK3Q9BYP7 1800 aa21.73■■□□□ 1.07
CSGALNACT1-204ENST00000517494 RGPD3A6NKT7 1758 aaPredicted RBP21.72■■□□□ 1.07
CSGALNACT1-204ENST00000517494 RGPD4Q7Z3J3 1758 aa21.72■■□□□ 1.07
CSGALNACT1-204ENST00000517494 SBF2Q86WG5 1849 aa21.72■■□□□ 1.07
CSGALNACT1-204ENST00000517494 TXNRD1Q16881 649 aa21.72■■□□□ 1.07
CSGALNACT1-204ENST00000517494 PROM2Q8N271 834 aa21.72■■□□□ 1.07
CSGALNACT1-204ENST00000517494 CCDC7Q96M83 1385 aa21.72■■□□□ 1.07
CSGALNACT1-204ENST00000517494 NFAT5O94916 1531 aa21.71■■□□□ 1.07
CSGALNACT1-204ENST00000517494 AKAP12Q02952 1782 aa21.71■■□□□ 1.07
CSGALNACT1-204ENST00000517494 BCL9O00512 1426 aa21.71■■□□□ 1.07
CSGALNACT1-204ENST00000517494 TMC1Q8TDI8 760 aa21.7■■□□□ 1.06
CSGALNACT1-204ENST00000517494 NLRP2Q9NX02 1062 aa21.7■■□□□ 1.06
CSGALNACT1-204ENST00000517494 ATF5Q9Y2D1 282 aaPredicted RBP21.7■■□□□ 1.06
CSGALNACT1-204ENST00000517494 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
CSGALNACT1-204ENST00000517494 NME9Q86XW9 330 aa21.69■■□□□ 1.06
CSGALNACT1-204ENST00000517494 ACSBG1Q96GR2 724 aa21.69■■□□□ 1.06
CSGALNACT1-204ENST00000517494 TNS2Q63HR2 1409 aa21.69■■□□□ 1.06
CSGALNACT1-204ENST00000517494 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
CSGALNACT1-204ENST00000517494 SLC15A2Q16348 729 aa21.66■■□□□ 1.06
CSGALNACT1-204ENST00000517494 CARD11Q9BXL7 1154 aa21.66■■□□□ 1.06
CSGALNACT1-204ENST00000517494 ERBB3P21860 1342 aa21.65■■□□□ 1.06
CSGALNACT1-204ENST00000517494 HDGFL2Q7Z4V5 671 aaPredicted RBP21.65■■□□□ 1.06
CSGALNACT1-204ENST00000517494 ABCC6O95255 1503 aa21.64■■□□□ 1.05
CSGALNACT1-204ENST00000517494 IL2RBP14784 551 aa21.63■■□□□ 1.05
CSGALNACT1-204ENST00000517494 PTGER2P43116 358 aa21.63■■□□□ 1.05
CSGALNACT1-204ENST00000517494 ANKRD24Q8TF21 1146 aa21.63■■□□□ 1.05
CSGALNACT1-204ENST00000517494 MON2Q7Z3U7 1717 aa21.63■■□□□ 1.05
CSGALNACT1-204ENST00000517494 USP31Q70CQ4 1352 aa21.62■■□□□ 1.05
CSGALNACT1-204ENST00000517494 MYOM1P52179 1685 aa21.62■■□□□ 1.05
CSGALNACT1-204ENST00000517494 SBNO2Q9Y2G9 1366 aa21.61■■□□□ 1.05
CSGALNACT1-204ENST00000517494 SLC12A5Q9H2X9 1139 aa21.61■■□□□ 1.05
CSGALNACT1-204ENST00000517494 CD163L1Q9NR16 1453 aa21.6■■□□□ 1.05
CSGALNACT1-204ENST00000517494 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
CSGALNACT1-204ENST00000517494 MTFR1LQ9H019 292 aa21.6■■□□□ 1.05
CSGALNACT1-204ENST00000517494 LTV1Q96GA3 475 aaPredicted RBP21.59■■□□□ 1.05
CSGALNACT1-204ENST00000517494 NHSQ6T4R5 1651 aa21.59■■□□□ 1.05
CSGALNACT1-204ENST00000517494 TERF2IPQ9NYB0 399 aa21.58■■□□□ 1.05
CSGALNACT1-204ENST00000517494 EDC4Q6P2E9 1401 aaKnown RBP21.57■■□□□ 1.04
CSGALNACT1-204ENST00000517494 SYT17Q9BSW7 474 aa21.56■■□□□ 1.04
CSGALNACT1-204ENST00000517494 A0A1W2PP64 1363 aa21.56■■□□□ 1.04
CSGALNACT1-204ENST00000517494 DDX54Q8TDD1 881 aaKnown RBP21.55■■□□□ 1.04
CSGALNACT1-204ENST00000517494 TONSLQ96HA7 1378 aa21.55■■□□□ 1.04
CSGALNACT1-204ENST00000517494 LTN1O94822 1766 aa21.55■■□□□ 1.04
CSGALNACT1-204ENST00000517494 ZNF827Q17R98 1081 aa21.53■■□□□ 1.04
CSGALNACT1-204ENST00000517494 USP54Q70EL1 1684 aa21.53■■□□□ 1.04
CSGALNACT1-204ENST00000517494 SYTL4Q96C24 671 aaPredicted RBP21.52■■□□□ 1.04
CSGALNACT1-204ENST00000517494 ARXQ96QS3 562 aa21.52■■□□□ 1.04
CSGALNACT1-204ENST00000517494 KLHL34Q8N239 644 aa21.51■■□□□ 1.03
CSGALNACT1-204ENST00000517494 IP6K1Q92551 441 aa21.5■■□□□ 1.03
CSGALNACT1-204ENST00000517494 SGIP1Q9BQI5 828 aa21.5■■□□□ 1.03
CSGALNACT1-204ENST00000517494 LRRC4BQ9NT99 713 aa21.5■■□□□ 1.03
CSGALNACT1-204ENST00000517494 ZNF784Q8NCA9 323 aaPredicted RBP21.49■■□□□ 1.03
CSGALNACT1-204ENST00000517494 COG3Q96JB2 828 aa21.49■■□□□ 1.03
CSGALNACT1-204ENST00000517494 BTAF1O14981 1849 aa21.49■■□□□ 1.03
CSGALNACT1-204ENST00000517494 PAPPAQ13219 1627 aa21.48■■□□□ 1.03
CSGALNACT1-204ENST00000517494 AMPHP49418 695 aa21.47■■□□□ 1.03
CSGALNACT1-204ENST00000517494 UTRNP46939 3433 aa21.46■■□□□ 1.03
CSGALNACT1-204ENST00000517494 FBLN1P23142 703 aa21.46■■□□□ 1.03
CSGALNACT1-204ENST00000517494 KCNQ4P56696 695 aa21.46■■□□□ 1.03
CSGALNACT1-204ENST00000517494 MAP3K19Q56UN5 1328 aa21.46■■□□□ 1.03
CSGALNACT1-204ENST00000517494 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 HOXC9P31274 260 aa21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 PRIM1P49642 420 aaKnown RBP21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 GPR162Q16538 588 aa21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 SLC27A3Q5K4L6 730 aa21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 AKT1S1Q96B36 256 aa21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 PUS7Q96PZ0 661 aaKnown RBP21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 TFCP2L1Q9NZI6 479 aa21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 KAT6BQ8WYB5 2073 aa21.44■■□□□ 1.02
CSGALNACT1-204ENST00000517494 POLD1P28340 1107 aa21.43■■□□□ 1.02
CSGALNACT1-204ENST00000517494 ANKRD36BQ8N2N9 1353 aa21.41■■□□□ 1.02
CSGALNACT1-204ENST00000517494 PNPLA7Q6ZV29 1317 aa21.41■■□□□ 1.02
CSGALNACT1-204ENST00000517494 ZCRB1Q8TBF4 217 aaKnown RBP21.41■■□□□ 1.02
CSGALNACT1-204ENST00000517494 TESK2Q96S53 571 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms