RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 SKIP12755 728 aa8.18□□□□□ -1.1
LINC00534-201ENST00000517400 PLEKHM2Q8IWE5 1019 aa8.18□□□□□ -1.1
LINC00534-201ENST00000517400 FAM174AQ8TBP5 190 aa8.18□□□□□ -1.1
LINC00534-201ENST00000517400 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.17□□□□□ -1.1
LINC00534-201ENST00000517400 LZTS3O60299 673 aaPredicted RBP8.17□□□□□ -1.1
LINC00534-201ENST00000517400 NBPF20Q3BBV1 942 aa8.17□□□□□ -1.1
LINC00534-201ENST00000517400 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
LINC00534-201ENST00000517400 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
LINC00534-201ENST00000517400 ESPNB1AK53 854 aa8.16□□□□□ -1.1
LINC00534-201ENST00000517400 GIGYF1O75420 1035 aaPredicted RBP8.16□□□□□ -1.1
LINC00534-201ENST00000517400 SLC19A1P41440 591 aa8.16□□□□□ -1.1
LINC00534-201ENST00000517400 RNF20Q5VTR2 975 aa8.16□□□□□ -1.1
LINC00534-201ENST00000517400 CCDC125Q86Z20 511 aa8.16□□□□□ -1.1
LINC00534-201ENST00000517400 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
LINC00534-201ENST00000517400 USP17L5A8MUK1 530 aa8.15□□□□□ -1.1
LINC00534-201ENST00000517400 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.1
LINC00534-201ENST00000517400 TRAF7Q6Q0C0 670 aa8.15□□□□□ -1.1
LINC00534-201ENST00000517400 SEPT12Q8IYM1 358 aa8.15□□□□□ -1.1
LINC00534-201ENST00000517400 MPNDQ8N594 471 aa8.15□□□□□ -1.1
LINC00534-201ENST00000517400 PLPP7Q8NBV4 271 aa8.15□□□□□ -1.1
LINC00534-201ENST00000517400 EHBP1Q8NDI1 1231 aa8.15□□□□□ -1.1
LINC00534-201ENST00000517400 USP17L3A6NCW0 530 aa8.14□□□□□ -1.11
LINC00534-201ENST00000517400 USP17L4A6NCW7 530 aa8.14□□□□□ -1.11
LINC00534-201ENST00000517400 KANK4Q5T7N3 995 aaPredicted RBP8.14□□□□□ -1.11
LINC00534-201ENST00000517400 USP17L2Q6R6M4 530 aa8.14□□□□□ -1.11
LINC00534-201ENST00000517400 USP17L1Q7RTZ2 530 aa8.14□□□□□ -1.11
LINC00534-201ENST00000517400 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
LINC00534-201ENST00000517400 VRTNQ9H8Y1 702 aa8.14□□□□□ -1.11
LINC00534-201ENST00000517400 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
LINC00534-201ENST00000517400 SPRYD7Q5W111 196 aa8.13□□□□□ -1.11
LINC00534-201ENST00000517400 KCTD15Q96SI1 283 aaPredicted RBP8.13□□□□□ -1.11
LINC00534-201ENST00000517400 CCDC180Q9P1Z9 1646 aa8.12□□□□□ -1.11
LINC00534-201ENST00000517400 WNT7AO00755 349 aa8.12□□□□□ -1.11
LINC00534-201ENST00000517400 SIAH2O43255 324 aa8.12□□□□□ -1.11
LINC00534-201ENST00000517400 ATG7O95352 703 aa8.12□□□□□ -1.11
LINC00534-201ENST00000517400 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
LINC00534-201ENST00000517400 PRKD2Q9BZL6 878 aa8.12□□□□□ -1.11
LINC00534-201ENST00000517400 LCE2BO14633 110 aa8.11□□□□□ -1.11
LINC00534-201ENST00000517400 NCOA4Q13772 614 aa8.11□□□□□ -1.11
LINC00534-201ENST00000517400 VASH1Q7L8A9 365 aaPredicted RBP8.11□□□□□ -1.11
LINC00534-201ENST00000517400 ZNF598Q86UK7 904 aaKnown RBP8.11□□□□□ -1.11
LINC00534-201ENST00000517400 DEPDC4Q8N2C3 294 aa8.11□□□□□ -1.11
LINC00534-201ENST00000517400 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
LINC00534-201ENST00000517400 DOLKQ9UPQ8 538 aa8.11□□□□□ -1.11
LINC00534-201ENST00000517400 ATP5J2-PTCD1G3V325 749 aa8.1□□□□□ -1.11
LINC00534-201ENST00000517400 PDIA4P13667 645 aaKnown RBP8.1□□□□□ -1.11
LINC00534-201ENST00000517400 GRM5P41594 1212 aa8.1□□□□□ -1.11
LINC00534-201ENST00000517400 PDE4CQ08493 712 aa8.1□□□□□ -1.11
LINC00534-201ENST00000517400 EML3Q32P44 896 aa8.1□□□□□ -1.11
LINC00534-201ENST00000517400 CDCA8Q53HL2 280 aa8.1□□□□□ -1.11
LINC00534-201ENST00000517400 MKRN1Q9UHC7 482 aaKnown RBP8.1□□□□□ -1.11
LINC00534-201ENST00000517400 V9GY48 417 aaPredicted RBP8.1□□□□□ -1.11
LINC00534-201ENST00000517400 ELOAQ14241 798 aaKnown RBP8.09□□□□□ -1.11
LINC00534-201ENST00000517400 ARID5BQ14865 1188 aa8.09□□□□□ -1.11
LINC00534-201ENST00000517400 MRGPRX2Q96LB1 330 aa8.09□□□□□ -1.11
LINC00534-201ENST00000517400 INTS6LQ5JSJ4 861 aaKnown RBP8.08□□□□□ -1.12
LINC00534-201ENST00000517400 ZNF697Q5TEC3 545 aa8.08□□□□□ -1.12
LINC00534-201ENST00000517400 SIRT1Q96EB6 747 aa8.08□□□□□ -1.12
LINC00534-201ENST00000517400 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
LINC00534-201ENST00000517400 NOD1Q9Y239 953 aa8.08□□□□□ -1.12
LINC00534-201ENST00000517400 FAM196BA6NMK8 535 aa8.07□□□□□ -1.12
LINC00534-201ENST00000517400 CSB-PGBD3P0DP91 1061 aa8.07□□□□□ -1.12
LINC00534-201ENST00000517400 USP4Q13107 963 aa8.07□□□□□ -1.12
LINC00534-201ENST00000517400 NR5A1Q13285 461 aa8.07□□□□□ -1.12
LINC00534-201ENST00000517400 TRIM50Q86XT4 487 aa8.07□□□□□ -1.12
LINC00534-201ENST00000517400 CDCA7Q9BWT1 371 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-201ENST00000517400 USTQ9Y2C2 406 aa8.07□□□□□ -1.12
LINC00534-201ENST00000517400 PCDHB11Q9Y5F2 797 aa8.07□□□□□ -1.12
LINC00534-201ENST00000517400 TLL2Q9Y6L7 1015 aa8.07□□□□□ -1.12
LINC00534-201ENST00000517400 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
LINC00534-201ENST00000517400 ADH1CP00326 375 aa8.06□□□□□ -1.12
LINC00534-201ENST00000517400 OXLD1Q5BKU9 147 aa8.06□□□□□ -1.12
LINC00534-201ENST00000517400 LARP1Q6PKG0 1096 aaKnown RBP8.06□□□□□ -1.12
LINC00534-201ENST00000517400 TRIM52Q96A61 297 aa8.06□□□□□ -1.12
LINC00534-201ENST00000517400 RASA1P20936 1047 aa8.05□□□□□ -1.12
LINC00534-201ENST00000517400 FSHRP23945 695 aa8.05□□□□□ -1.12
LINC00534-201ENST00000517400 ATP1A2P50993 1020 aa8.05□□□□□ -1.12
LINC00534-201ENST00000517400 DHX9Q08211 1270 aaKnown RBP8.05□□□□□ -1.12
LINC00534-201ENST00000517400 PTK7Q13308 1070 aa8.05□□□□□ -1.12
LINC00534-201ENST00000517400 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
LINC00534-201ENST00000517400 PKD2L1Q9P0L9 805 aa8.05□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L15C9J2P7 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L10C9JJH3 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L13C9JLJ4 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L12C9JPN9 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L11C9JVI0 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L21D6R901 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L18D6R9N7 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L22D6RA61 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L17D6RBQ6 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L19D6RCP7 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L20D6RJB6 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 GFRA3O60609 400 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 RAB15P59190 212 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 CLDN10P78369 228 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 USP17L24Q0WX57 530 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 LARGE2Q8N3Y3 721 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 OGFOD1Q8N543 542 aa8.04□□□□□ -1.12
LINC00534-201ENST00000517400 ZBTB7BO15156 539 aaPredicted RBP8.03□□□□□ -1.12
LINC00534-201ENST00000517400 ERVK-9P63128 1117 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms