RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TRIOBPQ9H2D6 2365 aa5.78□□□□□ -1.48
SCARNA13-201ENST00000516672 THSD7BQ9C0I4 1608 aa5.77□□□□□ -1.48
SCARNA13-201ENST00000516672 ESCO1Q5FWF5 840 aa5.77□□□□□ -1.49
SCARNA13-201ENST00000516672 CHRDL2Q6WN34 429 aa5.77□□□□□ -1.49
SCARNA13-201ENST00000516672 USP35Q9P2H5 1018 aa5.77□□□□□ -1.49
SCARNA13-201ENST00000516672 TAOK2Q9UL54 1235 aa5.77□□□□□ -1.49
SCARNA13-201ENST00000516672 ARIH1Q9Y4X5 557 aaPredicted RBP5.77□□□□□ -1.49
SCARNA13-201ENST00000516672 PEAK1Q9H792 1746 aa5.77□□□□□ -1.49
SCARNA13-201ENST00000516672 MUC3AQ02505 3323 aa5.76□□□□□ -1.49
SCARNA13-201ENST00000516672 COL14A1Q05707 1796 aaKnown RBP5.76□□□□□ -1.49
SCARNA13-201ENST00000516672 IDI1Q13907 227 aa5.76□□□□□ -1.49
SCARNA13-201ENST00000516672 COL9A2Q14055 689 aaPredicted RBP5.76□□□□□ -1.49
SCARNA13-201ENST00000516672 CHADLQ6NUI6 762 aa5.76□□□□□ -1.49
SCARNA13-201ENST00000516672 RBM27Q9P2N5 1060 aaKnown RBP5.76□□□□□ -1.49
SCARNA13-201ENST00000516672 MKI67P46013 3256 aaKnown RBP5.76□□□□□ -1.49
SCARNA13-201ENST00000516672 PASKQ96RG2 1323 aa5.75□□□□□ -1.49
SCARNA13-201ENST00000516672 ZFYVE9O95405 1425 aa5.75□□□□□ -1.49
SCARNA13-201ENST00000516672 TNFRSF10AO00220 468 aa5.75□□□□□ -1.49
SCARNA13-201ENST00000516672 FOXK2Q01167 660 aa5.75□□□□□ -1.49
SCARNA13-201ENST00000516672 HPS5Q9UPZ3 1129 aa5.75□□□□□ -1.49
SCARNA13-201ENST00000516672 HFM1A2PYH4 1435 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 TROQ12816 1431 aaPredicted RBP5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 LRRC37A3O60309 1634 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 QSER1Q2KHR3 1735 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 XRN1Q8IZH2 1706 aaKnown RBP5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 CA12O43570 354 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 MAP3K11Q16584 847 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 MSL1Q68DK7 614 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 BARGINQ6ZT62 677 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 RNF181Q9P0P0 153 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 CDK11AQ9UQ88 783 aaPredicted RBP5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 LRPPRCP42704 1394 aaKnown RBP5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 CLIP1P30622 1438 aa5.74□□□□□ -1.49
SCARNA13-201ENST00000516672 SOX1O00570 391 aaPredicted RBP5.73□□□□□ -1.49
SCARNA13-201ENST00000516672 GRM1Q13255 1194 aa5.73□□□□□ -1.49
SCARNA13-201ENST00000516672 ANKRD13DQ6ZTN6 518 aa5.73□□□□□ -1.49
SCARNA13-201ENST00000516672 AKT1S1Q96B36 256 aa5.73□□□□□ -1.49
SCARNA13-201ENST00000516672 LRCH3Q96II8 777 aa5.73□□□□□ -1.49
SCARNA13-201ENST00000516672 GPR101Q96P66 508 aaPredicted RBP5.73□□□□□ -1.49
SCARNA13-201ENST00000516672 CEP152O94986 1710 aa5.72□□□□□ -1.49
SCARNA13-201ENST00000516672 MRE11P49959 708 aa5.72□□□□□ -1.49
SCARNA13-201ENST00000516672 BCS1LQ9Y276 419 aa5.72□□□□□ -1.49
SCARNA13-201ENST00000516672 HCN4Q9Y3Q4 1203 aa5.72□□□□□ -1.49
SCARNA13-201ENST00000516672 SPATA31E1Q6ZUB1 1445 aa5.72□□□□□ -1.49
SCARNA13-201ENST00000516672 RIMS2Q9UQ26 1411 aa5.72□□□□□ -1.49
SCARNA13-201ENST00000516672 ARHGEF5Q12774 1597 aa5.72□□□□□ -1.49
SCARNA13-201ENST00000516672 ATP7BP35670 1465 aa5.71□□□□□ -1.49
SCARNA13-201ENST00000516672 MTUS2Q5JR59 1369 aa5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 H0YGN5 161 aa5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 POTEIP0CG38 1075 aa5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 POTEJP0CG39 1038 aa5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 PAXIP1Q6ZW49 1069 aaPredicted RBP5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 DEFB123Q8N688 67 aa5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 SYMPKQ92797 1274 aaKnown RBP5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 CAPNS2Q96L46 248 aa5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 STRN4Q9NRL3 753 aa5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 CDC42BPAQ5VT25 1732 aa5.71□□□□□ -1.5
SCARNA13-201ENST00000516672 POTECB2RU33 542 aa5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 MSH5O43196 834 aa5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 HDGFP51858 240 aaKnown RBP5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 TFCP2L1Q9NZI6 479 aa5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 ABT1Q9ULW3 272 aaKnown RBP5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 TNS3Q68CZ2 1445 aa5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 SSH2Q76I76 1423 aa5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 KIAA1107Q9UPP5 1409 aa5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 NRXN1Q9ULB1 1477 aa5.7□□□□□ -1.5
SCARNA13-201ENST00000516672 BRD4O60885 1362 aaPredicted RBP5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 BRCA2P51587 3418 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 PIEZO1Q92508 2521 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 GLTPD2A6NH11 291 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 AOC2O75106 756 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 RGS20O76081 388 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 ECE1P42892 770 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 CYP4F22Q6NT55 531 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 LMOD2Q6P5Q4 547 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 Q7L0L9 218 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 CDCA7Q9BWT1 371 aaPredicted RBP5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 LRRC4BQ9NT99 713 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 PRR36Q9H6K5 1346 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 TUBGCP6Q96RT7 1819 aa5.69□□□□□ -1.5
SCARNA13-201ENST00000516672 PARP4Q9UKK3 1724 aaKnown RBP5.68□□□□□ -1.5
SCARNA13-201ENST00000516672 USP6P35125 1406 aa5.68□□□□□ -1.5
SCARNA13-201ENST00000516672 ARHGAP31Q2M1Z3 1444 aa5.68□□□□□ -1.5
SCARNA13-201ENST00000516672 PIK3C2AO00443 1686 aa5.68□□□□□ -1.5
SCARNA13-201ENST00000516672 CCDC144AA2RUR9 1427 aa5.67□□□□□ -1.5
SCARNA13-201ENST00000516672 ADRA2BP18089 450 aa5.67□□□□□ -1.5
SCARNA13-201ENST00000516672 CTU1Q7Z7A3 348 aaKnown RBP5.67□□□□□ -1.5
SCARNA13-201ENST00000516672 ATP1B4Q9UN42 357 aaPredicted RBP5.67□□□□□ -1.5
SCARNA13-201ENST00000516672 RANBP2P49792 3224 aaKnown RBP5.67□□□□□ -1.5
SCARNA13-201ENST00000516672 MAP2K2P36507 400 aa5.66□□□□□ -1.5
SCARNA13-201ENST00000516672 ACAP1Q15027 740 aa5.66□□□□□ -1.5
SCARNA13-201ENST00000516672 TCP11L2Q8N4U5 519 aa5.66□□□□□ -1.5
SCARNA13-201ENST00000516672 MTMR10Q9NXD2 777 aa5.66□□□□□ -1.5
SCARNA13-201ENST00000516672 FCHSD2O94868 740 aa5.65□□□□□ -1.5
SCARNA13-201ENST00000516672 ITGBL1O95965 494 aaPredicted RBP5.65□□□□□ -1.5
SCARNA13-201ENST00000516672 EIF2AK4Q9P2K8 1649 aaKnown RBP5.65□□□□□ -1.51
SCARNA13-201ENST00000516672 LAMA2P24043 3122 aaKnown RBP5.65□□□□□ -1.51
SCARNA13-201ENST00000516672 EEA1Q15075 1411 aa5.65□□□□□ -1.51
SCARNA13-201ENST00000516672 ERBINQ96RT1 1412 aa5.65□□□□□ -1.51
SCARNA13-201ENST00000516672 CHD8Q9HCK8 2581 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms