RNA–Protein interactions for RNA: ENST00000516219.1

RN7SKP52-201, Transcript of RNA, 7SK small nuclear pseudogene 52, humanhuman

BASIC

Gene RN7SKP52, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP52-201ENST00000516219 ARHGEF10O15013 1369 aa13.77□□□□□ -0.21
RN7SKP52-201ENST00000516219 EN1Q05925 392 aaPredicted RBP13.77□□□□□ -0.21
RN7SKP52-201ENST00000516219 CFAP70Q5T0N1 1121 aa13.77□□□□□ -0.21
RN7SKP52-201ENST00000516219 CAMTA1Q9Y6Y1 1673 aa13.76□□□□□ -0.21
RN7SKP52-201ENST00000516219 TULP4Q9NRJ4 1543 aa13.76□□□□□ -0.21
RN7SKP52-201ENST00000516219 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
RN7SKP52-201ENST00000516219 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
RN7SKP52-201ENST00000516219 A0A0G2JS52 829 aa13.76□□□□□ -0.21
RN7SKP52-201ENST00000516219 EMP3P54852 163 aa13.76□□□□□ -0.21
RN7SKP52-201ENST00000516219 MYT1Q01538 1121 aa13.76□□□□□ -0.21
RN7SKP52-201ENST00000516219 SBF2Q86WG5 1849 aa13.76□□□□□ -0.21
RN7SKP52-201ENST00000516219 DISP2A7MBM2 1401 aa13.75□□□□□ -0.21
RN7SKP52-201ENST00000516219 R3HDM1Q15032 1099 aaKnown RBP13.75□□□□□ -0.21
RN7SKP52-201ENST00000516219 PRAM1Q96QH2 718 aa13.75□□□□□ -0.21
RN7SKP52-201ENST00000516219 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
RN7SKP52-201ENST00000516219 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
RN7SKP52-201ENST00000516219 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.75□□□□□ -0.21
RN7SKP52-201ENST00000516219 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
RN7SKP52-201ENST00000516219 WNK3Q9BYP7 1800 aa13.74□□□□□ -0.21
RN7SKP52-201ENST00000516219 BAG6P46379 1132 aa13.74□□□□□ -0.21
RN7SKP52-201ENST00000516219 C14orf93Q9H972 538 aaKnown RBP13.74□□□□□ -0.21
RN7SKP52-201ENST00000516219 PCDHB13Q9Y5F0 798 aa13.74□□□□□ -0.21
RN7SKP52-201ENST00000516219 LMO7Q8WWI1 1683 aa13.74□□□□□ -0.21
RN7SKP52-201ENST00000516219 PSME1Q06323 249 aa13.73□□□□□ -0.21
RN7SKP52-201ENST00000516219 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
RN7SKP52-201ENST00000516219 SPATA31A5Q5VU36 1347 aa13.72□□□□□ -0.21
RN7SKP52-201ENST00000516219 SPATA31A7Q8IWB4 1347 aa13.72□□□□□ -0.21
RN7SKP52-201ENST00000516219 EZH2Q15910 746 aaKnown RBP13.72□□□□□ -0.21
RN7SKP52-201ENST00000516219 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
RN7SKP52-201ENST00000516219 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
RN7SKP52-201ENST00000516219 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
RN7SKP52-201ENST00000516219 PARP4Q9UKK3 1724 aaKnown RBP13.71□□□□□ -0.21
RN7SKP52-201ENST00000516219 ATP7BP35670 1465 aa13.71□□□□□ -0.21
RN7SKP52-201ENST00000516219 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
RN7SKP52-201ENST00000516219 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
RN7SKP52-201ENST00000516219 MINK1Q8N4C8 1332 aaPredicted RBP13.69□□□□□ -0.22
RN7SKP52-201ENST00000516219 CASZ1Q86V15 1759 aa13.69□□□□□ -0.22
RN7SKP52-201ENST00000516219 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
RN7SKP52-201ENST00000516219 KRTAP3-3Q9BYR6 98 aa13.68□□□□□ -0.22
RN7SKP52-201ENST00000516219 KRTAP3-2Q9BYR7 98 aa13.68□□□□□ -0.22
RN7SKP52-201ENST00000516219 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
RN7SKP52-201ENST00000516219 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
RN7SKP52-201ENST00000516219 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
RN7SKP52-201ENST00000516219 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
RN7SKP52-201ENST00000516219 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
RN7SKP52-201ENST00000516219 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
RN7SKP52-201ENST00000516219 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
RN7SKP52-201ENST00000516219 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
RN7SKP52-201ENST00000516219 SPATA31A1Q5TZJ5 1347 aa13.66□□□□□ -0.22
RN7SKP52-201ENST00000516219 AKAP12Q02952 1782 aa13.66□□□□□ -0.22
RN7SKP52-201ENST00000516219 TRIM37O94972 964 aa13.66□□□□□ -0.22
RN7SKP52-201ENST00000516219 POGKQ9P215 609 aa13.65□□□□□ -0.22
RN7SKP52-201ENST00000516219 TRAK1Q9UPV9 953 aa13.65□□□□□ -0.22
RN7SKP52-201ENST00000516219 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
RN7SKP52-201ENST00000516219 MYOM1P52179 1685 aa13.65□□□□□ -0.22
RN7SKP52-201ENST00000516219 UTRNP46939 3433 aa13.65□□□□□ -0.22
RN7SKP52-201ENST00000516219 IRX5P78411 483 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP52-201ENST00000516219 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
RN7SKP52-201ENST00000516219 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
RN7SKP52-201ENST00000516219 SSH2Q76I76 1423 aa13.64□□□□□ -0.23
RN7SKP52-201ENST00000516219 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
RN7SKP52-201ENST00000516219 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
RN7SKP52-201ENST00000516219 COL18A1P39060 1754 aa13.63□□□□□ -0.23
RN7SKP52-201ENST00000516219 NUTM2GQ5VZR2 741 aa13.62□□□□□ -0.23
RN7SKP52-201ENST00000516219 STRN4Q9NRL3 753 aa13.62□□□□□ -0.23
RN7SKP52-201ENST00000516219 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP52-201ENST00000516219 ZC3H6P61129 1189 aaKnown RBP13.61□□□□□ -0.23
RN7SKP52-201ENST00000516219 USP35Q9P2H5 1018 aa13.61□□□□□ -0.23
RN7SKP52-201ENST00000516219 APBA3O96018 575 aa13.6□□□□□ -0.23
RN7SKP52-201ENST00000516219 NGDNQ8NEJ9 315 aaKnown RBP13.6□□□□□ -0.23
RN7SKP52-201ENST00000516219 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
RN7SKP52-201ENST00000516219 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
RN7SKP52-201ENST00000516219 EIF3AQ14152 1382 aaKnown RBP13.59□□□□□ -0.23
RN7SKP52-201ENST00000516219 KIAA1210Q9ULL0 1709 aa13.59□□□□□ -0.23
RN7SKP52-201ENST00000516219 CHD4Q14839 1912 aa13.58□□□□□ -0.24
RN7SKP52-201ENST00000516219 PARD3Q8TEW0 1356 aa13.58□□□□□ -0.24
RN7SKP52-201ENST00000516219 COL5A2P05997 1499 aaPredicted RBP13.57□□□□□ -0.24
RN7SKP52-201ENST00000516219 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
RN7SKP52-201ENST00000516219 FAM196AQ6ZSG2 479 aa13.57□□□□□ -0.24
RN7SKP52-201ENST00000516219 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
RN7SKP52-201ENST00000516219 YY1P25490 414 aa13.56□□□□□ -0.24
RN7SKP52-201ENST00000516219 IFNL1Q8IU54 200 aa13.56□□□□□ -0.24
RN7SKP52-201ENST00000516219 MIER1Q8N108 512 aa13.56□□□□□ -0.24
RN7SKP52-201ENST00000516219 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
RN7SKP52-201ENST00000516219 KDM2AQ9Y2K7 1162 aa13.56□□□□□ -0.24
RN7SKP52-201ENST00000516219 RAB3GAP2Q9H2M9 1393 aa13.56□□□□□ -0.24
RN7SKP52-201ENST00000516219 PTF1AQ7RTS3 328 aa13.54□□□□□ -0.24
RN7SKP52-201ENST00000516219 PDGFDQ9GZP0 370 aaPredicted RBP13.54□□□□□ -0.24
RN7SKP52-201ENST00000516219 ANO8Q9HCE9 1232 aaPredicted RBP13.54□□□□□ -0.24
RN7SKP52-201ENST00000516219 ACEP12821 1306 aa13.54□□□□□ -0.24
RN7SKP52-201ENST00000516219 SLIT3O75094 1523 aa13.54□□□□□ -0.24
RN7SKP52-201ENST00000516219 BARGINQ6ZT62 677 aa13.53□□□□□ -0.24
RN7SKP52-201ENST00000516219 DCAF11Q8TEB1 546 aa13.53□□□□□ -0.24
RN7SKP52-201ENST00000516219 USP19O94966 1318 aa13.53□□□□□ -0.24
RN7SKP52-201ENST00000516219 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
RN7SKP52-201ENST00000516219 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
RN7SKP52-201ENST00000516219 RNF166Q96A37 237 aaPredicted RBP13.52□□□□□ -0.25
RN7SKP52-201ENST00000516219 CPDO75976 1380 aa13.52□□□□□ -0.25
RN7SKP52-201ENST00000516219 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.25
RN7SKP52-201ENST00000516219 PDE3BQ13370 1112 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms