RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 SSBP4Q9BWG4 385 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MRIQ9BWK5 157 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 C1QTNF3Q9BXJ4 246 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SCAND2PQ9GZW5 306 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CD248Q9HCU0 757 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LMCD1Q9NZU5 365 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HCSTQ9UBK5 93 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SRRDQ9UH36 339 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HCN2Q9UL51 889 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ADAMTS8Q9UP79 889 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZFR2Q9UPR6 939 aaKnown RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 U3KPZ7 1027 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FLNBO75369 2602 aaKnown RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MYO7AQ13402 2215 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MYO18BQ8IUG5 2567 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SEC16AO15027 2179 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 BRWD1Q9NSI6 2320 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DMXL2Q8TDJ6 3036 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MYO15AQ9UKN7 3530 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CELSR2Q9HCU4 2923 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CNTNAP2Q9UHC6 1331 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZFHX4Q86UP3 3567 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 C19orf67A6NJJ6 358 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 H3BM21 787 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DLL1O00548 723 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 IKBKBO14920 756 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TRIM66O15016 1216 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HYAL3O43820 417 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 RBMXL2O75526 392 aaKnown RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KRT33AO76009 404 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FMNL1O95466 1100 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SNAI1O95863 264 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FSHBP01225 129 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FRMD6-AS1P0C7T7 363 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HOXB6P17509 224 aaKnown RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LTKP29376 864 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HOXC13P31276 330 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TIE1P35590 1138 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PTGER2P43116 358 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 IRAK1P51617 712 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KRTAP12-3P60328 96 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZXDAP98168 799 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 E2F1Q01094 437 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MYT1Q01538 1121 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 C1QBPQ07021 282 aaKnown RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LRP8Q14114 963 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KRT33BQ14525 404 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NFATC4Q14934 902 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 COL19A1Q14993 1142 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KRTAP13-4Q3LI77 160 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PKDCCQ504Y2 493 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TIGD5Q53EQ6 642 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 IFFO2Q5TF58 517 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PAPD7Q5XG87 772 aaKnown RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KANK3Q6NY19 840 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LCNL1Q6ZST4 164 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PRRT2Q7Z6L0 340 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ILDR1Q86SU0 546 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LURAP1LQ8IV03 231 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 GPR161Q8N6U8 529 aaKnown RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 POU5F2Q8N7G0 328 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CERKQ8TCT0 537 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DCAF5Q96JK2 942 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 WDR24Q96S15 920 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TSG101Q99816 390 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ADAM2Q99965 735 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PYGO2Q9BRQ0 406 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 BCL2L12Q9HB09 334 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TRMT1Q9NXH9 659 aaKnown RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ANKFY1Q9P2R3 1169 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 RAPGEFL1Q9UHV5 662 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CHTOPQ9Y3Y2 248 aaKnown RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NR2E1Q9Y466 385 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FLGP20930 4061 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 A0A0C4DFX4 3053 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 COL1A2P08123 1366 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 AKAP13Q12802 2813 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZZEF1O43149 2961 aa-0.33□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TCF20Q9UGU0 1960 aaKnown RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SMG1Q96Q15 3661 aaKnown RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CHD8Q9HCK8 2581 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CACNA1IQ9P0X4 2223 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ANKRD11Q6UB99 2663 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MXRA5Q9NR99 2828 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PLSCR5A0PG75 271 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 C11orf95C9JLR9 678 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SOCS7O14512 581 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ST8SIA5O15466 376 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SPRY2O43597 315 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TBC1D4O60343 1298 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 GRIN3BO60391 1043 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FOXD2O60548 495 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 GAS8-AS1O95177 125 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PRB2P02812 416 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ADRB1P08588 477 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 INHBBP09529 407 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 INSRRP14616 1297 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FUT4P22083 530 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 RFX1P22670 979 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 IGFBP6P24592 240 aaPredicted RBP-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms