RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 ARHGEF25Q86VW2 580 aa23.02■■□□□ 1.28
SDHC-209ENST00000515731 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
SDHC-209ENST00000515731 USP54Q70EL1 1684 aa23.02■■□□□ 1.28
SDHC-209ENST00000515731 WDR17Q8IZU2 1322 aa23.02■■□□□ 1.28
SDHC-209ENST00000515731 TTC21AQ8NDW8 1320 aa23.02■■□□□ 1.28
SDHC-209ENST00000515731 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
SDHC-209ENST00000515731 BCL9O00512 1426 aa23.01■■□□□ 1.27
SDHC-209ENST00000515731 NBPF14Q5TI25 921 aa23.01■■□□□ 1.27
SDHC-209ENST00000515731 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
SDHC-209ENST00000515731 ABCC6O95255 1503 aa23.01■■□□□ 1.27
SDHC-209ENST00000515731 PLSCR1O15162 318 aa23■■□□□ 1.27
SDHC-209ENST00000515731 SBNO2Q9Y2G9 1366 aa23■■□□□ 1.27
SDHC-209ENST00000515731 NFAT5O94916 1531 aa22.99■■□□□ 1.27
SDHC-209ENST00000515731 DDB1Q16531 1140 aa22.99■■□□□ 1.27
SDHC-209ENST00000515731 CDCA7Q9BWT1 371 aaPredicted RBP22.99■■□□□ 1.27
SDHC-209ENST00000515731 TOM1L2Q6ZVM7 507 aa22.98■■□□□ 1.27
SDHC-209ENST00000515731 CARD10Q9BWT7 1032 aa22.96■■□□□ 1.27
SDHC-209ENST00000515731 ZBTB7CA1YPR0 619 aa22.95■■□□□ 1.26
SDHC-209ENST00000515731 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
SDHC-209ENST00000515731 BCL11BQ9C0K0 894 aaPredicted RBP22.94■■□□□ 1.26
SDHC-209ENST00000515731 USP31Q70CQ4 1352 aa22.93■■□□□ 1.26
SDHC-209ENST00000515731 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
SDHC-209ENST00000515731 MARCH10Q8NA82 808 aaPredicted RBP22.92■■□□□ 1.26
SDHC-209ENST00000515731 CASZ1Q86V15 1759 aa22.91■■□□□ 1.26
SDHC-209ENST00000515731 LTN1O94822 1766 aa22.91■■□□□ 1.26
SDHC-209ENST00000515731 CD163L1Q9NR16 1453 aa22.91■■□□□ 1.26
SDHC-209ENST00000515731 CCDC7Q96M83 1385 aa22.9■■□□□ 1.26
SDHC-209ENST00000515731 KCNQ2O43526 872 aa22.88■■□□□ 1.25
SDHC-209ENST00000515731 SPON1Q9HCB6 807 aa22.88■■□□□ 1.25
SDHC-209ENST00000515731 PTF1AQ7RTS3 328 aa22.87■■□□□ 1.25
SDHC-209ENST00000515731 PROM2Q8N271 834 aa22.87■■□□□ 1.25
SDHC-209ENST00000515731 EXOC5O00471 708 aa22.86■■□□□ 1.25
SDHC-209ENST00000515731 PUS7Q96PZ0 661 aaKnown RBP22.86■■□□□ 1.25
SDHC-209ENST00000515731 CSB-PGBD3P0DP91 1061 aa22.85■■□□□ 1.25
SDHC-209ENST00000515731 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
SDHC-209ENST00000515731 TNS2Q63HR2 1409 aa22.84■■□□□ 1.25
SDHC-209ENST00000515731 CARD11Q9BXL7 1154 aa22.84■■□□□ 1.25
SDHC-209ENST00000515731 SOX12O15370 315 aa22.83■■□□□ 1.25
SDHC-209ENST00000515731 NINLQ9Y2I6 1382 aa22.82■■□□□ 1.24
SDHC-209ENST00000515731 ANO8Q9HCE9 1232 aaPredicted RBP22.82■■□□□ 1.24
SDHC-209ENST00000515731 EDC4Q6P2E9 1401 aaKnown RBP22.82■■□□□ 1.24
SDHC-209ENST00000515731 ERBB3P21860 1342 aa22.82■■□□□ 1.24
SDHC-209ENST00000515731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.81■■□□□ 1.24
SDHC-209ENST00000515731 HDGFL2Q7Z4V5 671 aaPredicted RBP22.79■■□□□ 1.24
SDHC-209ENST00000515731 NME9Q86XW9 330 aa22.79■■□□□ 1.24
SDHC-209ENST00000515731 FAM208AQ9UK61 1670 aaKnown RBP22.78■■□□□ 1.24
SDHC-209ENST00000515731 TXNRD1Q16881 649 aa22.78■■□□□ 1.24
SDHC-209ENST00000515731 SLC12A5Q9H2X9 1139 aa22.78■■□□□ 1.24
SDHC-209ENST00000515731 PPP1R1BQ9UD71 204 aaPredicted RBP22.77■■□□□ 1.24
SDHC-209ENST00000515731 BTAF1O14981 1849 aa22.76■■□□□ 1.23
SDHC-209ENST00000515731 TMC1Q8TDI8 760 aa22.76■■□□□ 1.23
SDHC-209ENST00000515731 TERF2IPQ9NYB0 399 aa22.76■■□□□ 1.23
SDHC-209ENST00000515731 A0A1W2PP64 1363 aa22.76■■□□□ 1.23
SDHC-209ENST00000515731 KAT6BQ8WYB5 2073 aa22.75■■□□□ 1.23
SDHC-209ENST00000515731 IL2RBP14784 551 aa22.74■■□□□ 1.23
SDHC-209ENST00000515731 PAPPAQ13219 1627 aa22.74■■□□□ 1.23
SDHC-209ENST00000515731 TONSLQ96HA7 1378 aa22.74■■□□□ 1.23
SDHC-209ENST00000515731 SLC15A2Q16348 729 aa22.73■■□□□ 1.23
SDHC-209ENST00000515731 ANKRD24Q8TF21 1146 aa22.73■■□□□ 1.23
SDHC-209ENST00000515731 PDGFDQ9GZP0 370 aaPredicted RBP22.73■■□□□ 1.23
SDHC-209ENST00000515731 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
SDHC-209ENST00000515731 MYOM1P52179 1685 aa22.72■■□□□ 1.23
SDHC-209ENST00000515731 SLC24A1O60721 1099 aa22.72■■□□□ 1.23
SDHC-209ENST00000515731 STK32BQ9NY57 414 aa22.72■■□□□ 1.23
SDHC-209ENST00000515731 PTGER2P43116 358 aa22.71■■□□□ 1.23
SDHC-209ENST00000515731 IP6K1Q92551 441 aa22.71■■□□□ 1.23
SDHC-209ENST00000515731 TESK2Q96S53 571 aa22.71■■□□□ 1.23
SDHC-209ENST00000515731 QSER1Q2KHR3 1735 aa22.69■■□□□ 1.22
SDHC-209ENST00000515731 DCAF8L1A6NGE4 600 aa22.68■■□□□ 1.22
SDHC-209ENST00000515731 YY1P25490 414 aa22.68■■□□□ 1.22
SDHC-209ENST00000515731 ZBTB7AO95365 584 aa22.67■■□□□ 1.22
SDHC-209ENST00000515731 RGPD2P0DJD1 1756 aa22.66■■□□□ 1.22
SDHC-209ENST00000515731 ACSBG1Q96GR2 724 aa22.66■■□□□ 1.22
SDHC-209ENST00000515731 SGIP1Q9BQI5 828 aa22.66■■□□□ 1.22
SDHC-209ENST00000515731 UTRNP46939 3433 aa22.66■■□□□ 1.22
SDHC-209ENST00000515731 MTFR1LQ9H019 292 aa22.65■■□□□ 1.22
SDHC-209ENST00000515731 COL24A1Q17RW2 1714 aa22.65■■□□□ 1.22
SDHC-209ENST00000515731 SHANK3Q9BYB0 1731 aa22.65■■□□□ 1.22
SDHC-209ENST00000515731 ST20-MTHFSA0A0A6YYL1 179 aa22.64■■□□□ 1.21
SDHC-209ENST00000515731 ATF5Q9Y2D1 282 aaPredicted RBP22.63■■□□□ 1.21
SDHC-209ENST00000515731 LY75O60449 1722 aa22.62■■□□□ 1.21
SDHC-209ENST00000515731 CHD4Q14839 1912 aa22.61■■□□□ 1.21
SDHC-209ENST00000515731 COG3Q96JB2 828 aa22.61■■□□□ 1.21
SDHC-209ENST00000515731 ANKRD36BQ8N2N9 1353 aa22.61■■□□□ 1.21
SDHC-209ENST00000515731 MAP3K19Q56UN5 1328 aa22.6■■□□□ 1.21
SDHC-209ENST00000515731 HOXC9P31274 260 aa22.6■■□□□ 1.21
SDHC-209ENST00000515731 SYT17Q9BSW7 474 aa22.59■■□□□ 1.21
SDHC-209ENST00000515731 LRRC4BQ9NT99 713 aa22.59■■□□□ 1.21
SDHC-209ENST00000515731 DOT1LQ8TEK3 1739 aa22.59■■□□□ 1.21
SDHC-209ENST00000515731 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
SDHC-209ENST00000515731 MAP3K5Q99683 1374 aa22.58■■□□□ 1.21
SDHC-209ENST00000515731 TUBGCP6Q96RT7 1819 aa22.57■■□□□ 1.2
SDHC-209ENST00000515731 RTL1A6NKG5 1358 aa22.57■■□□□ 1.2
SDHC-209ENST00000515731 ZNF827Q17R98 1081 aa22.56■■□□□ 1.2
SDHC-209ENST00000515731 AKT1S1Q96B36 256 aa22.56■■□□□ 1.2
SDHC-209ENST00000515731 FHDC1Q9C0D6 1143 aaPredicted RBP22.56■■□□□ 1.2
SDHC-209ENST00000515731 DDX54Q8TDD1 881 aaKnown RBP22.55■■□□□ 1.2
SDHC-209ENST00000515731 LTV1Q96GA3 475 aaPredicted RBP22.55■■□□□ 1.2
SDHC-209ENST00000515731 KIF20BQ96Q89 1820 aa22.54■■□□□ 1.2
SDHC-209ENST00000515731 AMPHP49418 695 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms