RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 MAP3K19Q56UN5 1328 aa28.42■■■□□ 2.14
TRIM41-208ENST00000515499 DDX10Q13206 875 aaKnown RBP28.41■■■□□ 2.14
TRIM41-208ENST00000515499 VPS72Q15906 364 aa28.41■■■□□ 2.14
TRIM41-208ENST00000515499 AXIN2Q9Y2T1 843 aa28.41■■■□□ 2.14
TRIM41-208ENST00000515499 EVA1CP58658 441 aa28.4■■■□□ 2.14
TRIM41-208ENST00000515499 RRS1Q15050 365 aaKnown RBP28.39■■■□□ 2.14
TRIM41-208ENST00000515499 CC2D1BQ5T0F9 858 aaKnown RBP28.38■■■□□ 2.13
TRIM41-208ENST00000515499 IP6K1Q92551 441 aa28.38■■■□□ 2.13
TRIM41-208ENST00000515499 STRN4Q9NRL3 753 aa28.38■■■□□ 2.13
TRIM41-208ENST00000515499 AMPHP49418 695 aa28.37■■■□□ 2.13
TRIM41-208ENST00000515499 COL5A2P05997 1499 aaPredicted RBP28.36■■■□□ 2.13
TRIM41-208ENST00000515499 RXRBP28702 533 aa28.36■■■□□ 2.13
TRIM41-208ENST00000515499 TNNT2P45379 298 aaPredicted RBP28.36■■■□□ 2.13
TRIM41-208ENST00000515499 RBM6P78332 1123 aaKnown RBP28.36■■■□□ 2.13
TRIM41-208ENST00000515499 GJD4Q96KN9 370 aaPredicted RBP28.36■■■□□ 2.13
TRIM41-208ENST00000515499 RTL1A6NKG5 1358 aa28.35■■■□□ 2.13
TRIM41-208ENST00000515499 KIF24Q5T7B8 1368 aa28.35■■■□□ 2.13
TRIM41-208ENST00000515499 HOXC9P31274 260 aa28.34■■■□□ 2.13
TRIM41-208ENST00000515499 CCDC9Q9Y3X0 531 aaKnown RBP28.34■■■□□ 2.13
TRIM41-208ENST00000515499 RGPD5Q99666 1765 aa28.34■■■□□ 2.13
TRIM41-208ENST00000515499 BLMP54132 1417 aaPredicted RBP28.34■■■□□ 2.13
TRIM41-208ENST00000515499 POLKQ9UBT6 870 aa28.33■■■□□ 2.13
TRIM41-208ENST00000515499 MAP2P11137 1827 aaKnown RBP28.32■■■□□ 2.12
TRIM41-208ENST00000515499 LARP1Q6PKG0 1096 aaKnown RBP28.32■■■□□ 2.12
TRIM41-208ENST00000515499 EMILIN1Q9Y6C2 1016 aa28.32■■■□□ 2.12
TRIM41-208ENST00000515499 SPATA31A5Q5VU36 1347 aa28.32■■■□□ 2.12
TRIM41-208ENST00000515499 SPATA31A7Q8IWB4 1347 aa28.32■■■□□ 2.12
TRIM41-208ENST00000515499 WDR17Q8IZU2 1322 aa28.31■■■□□ 2.12
TRIM41-208ENST00000515499 FLT4P35916 1363 aa28.3■■■□□ 2.12
TRIM41-208ENST00000515499 CNGB1Q14028 1251 aaPredicted RBP28.29■■■□□ 2.12
TRIM41-208ENST00000515499 ERBB3P21860 1342 aa28.28■■■□□ 2.12
TRIM41-208ENST00000515499 SPATA31A1Q5TZJ5 1347 aa28.28■■■□□ 2.12
TRIM41-208ENST00000515499 CSB-PGBD3P0DP91 1061 aa28.28■■■□□ 2.12
TRIM41-208ENST00000515499 ANKRD24Q8TF21 1146 aa28.28■■■□□ 2.12
TRIM41-208ENST00000515499 CRB1P82279 1406 aa28.27■■■□□ 2.12
TRIM41-208ENST00000515499 PEAK1Q9H792 1746 aa28.27■■■□□ 2.12
TRIM41-208ENST00000515499 PPM1GO15355 546 aaPredicted RBP28.27■■■□□ 2.12
TRIM41-208ENST00000515499 TOM1L2Q6ZVM7 507 aa28.27■■■□□ 2.12
TRIM41-208ENST00000515499 GLI3P10071 1580 aa28.27■■■□□ 2.12
TRIM41-208ENST00000515499 INSRP06213 1382 aa28.26■■■□□ 2.12
TRIM41-208ENST00000515499 HSP90AB2PQ58FF8 381 aa28.26■■■□□ 2.11
TRIM41-208ENST00000515499 CDK12Q9NYV4 1490 aaPredicted RBP28.25■■■□□ 2.11
TRIM41-208ENST00000515499 SMG6Q86US8 1419 aaKnown RBP28.25■■■□□ 2.11
TRIM41-208ENST00000515499 ONECUT3O60422 494 aaPredicted RBP28.23■■■□□ 2.11
TRIM41-208ENST00000515499 LTV1Q96GA3 475 aaPredicted RBP28.23■■■□□ 2.11
TRIM41-208ENST00000515499 CARD10Q9BWT7 1032 aa28.23■■■□□ 2.11
TRIM41-208ENST00000515499 THRAP3Q9Y2W1 955 aaKnown RBP28.23■■■□□ 2.11
TRIM41-208ENST00000515499 TCP11L2Q8N4U5 519 aa28.22■■■□□ 2.11
TRIM41-208ENST00000515499 USP35Q9P2H5 1018 aa28.22■■■□□ 2.11
TRIM41-208ENST00000515499 BARGINQ6ZT62 677 aa28.2■■■□□ 2.1
TRIM41-208ENST00000515499 ILDR2Q71H61 639 aa28.2■■■□□ 2.1
TRIM41-208ENST00000515499 NLRP2Q9NX02 1062 aa28.2■■■□□ 2.1
TRIM41-208ENST00000515499 FAM98CQ17RN3 349 aaKnown RBP28.19■■■□□ 2.1
TRIM41-208ENST00000515499 MTHFSP49914 203 aa28.18■■■□□ 2.1
TRIM41-208ENST00000515499 FAM208AQ9UK61 1670 aaKnown RBP28.18■■■□□ 2.1
TRIM41-208ENST00000515499 PARD3Q8TEW0 1356 aa28.17■■■□□ 2.1
TRIM41-208ENST00000515499 RGS12O14924 1447 aa28.17■■■□□ 2.1
TRIM41-208ENST00000515499 SEPT12Q8IYM1 358 aa28.15■■■□□ 2.1
TRIM41-208ENST00000515499 RALBP1Q15311 655 aa28.14■■■□□ 2.1
TRIM41-208ENST00000515499 PPP2R1AP30153 589 aa28.13■■■□□ 2.09
TRIM41-208ENST00000515499 EIF4A2Q14240 407 aaKnown RBP28.12■■■□□ 2.09
TRIM41-208ENST00000515499 NBPF6Q5VWK0 638 aa28.12■■■□□ 2.09
TRIM41-208ENST00000515499 NBPF4Q96M43 638 aa28.12■■■□□ 2.09
TRIM41-208ENST00000515499 CDCA7Q9BWT1 371 aaPredicted RBP28.12■■■□□ 2.09
TRIM41-208ENST00000515499 A0A0G2JS52 829 aa28.11■■■□□ 2.09
TRIM41-208ENST00000515499 MYT1Q01538 1121 aa28.11■■■□□ 2.09
TRIM41-208ENST00000515499 THSD7AQ9UPZ6 1657 aa28.1■■■□□ 2.09
TRIM41-208ENST00000515499 RGPD2P0DJD1 1756 aa28.09■■■□□ 2.09
TRIM41-208ENST00000515499 EYA1Q99502 592 aa28.07■■■□□ 2.08
TRIM41-208ENST00000515499 DISP2A7MBM2 1401 aa28.07■■■□□ 2.08
TRIM41-208ENST00000515499 IL2RBP14784 551 aa28.05■■■□□ 2.08
TRIM41-208ENST00000515499 IL13P35225 146 aa28.05■■■□□ 2.08
TRIM41-208ENST00000515499 CFAP53Q96M91 514 aa28.05■■■□□ 2.08
TRIM41-208ENST00000515499 WNK3Q9BYP7 1800 aa28.05■■■□□ 2.08
TRIM41-208ENST00000515499 USHBP1Q8N6Y0 703 aa28.04■■■□□ 2.08
TRIM41-208ENST00000515499 PRKRIP1Q9H875 184 aaPredicted RBP28.04■■■□□ 2.08
TRIM41-208ENST00000515499 PARP4Q9UKK3 1724 aaKnown RBP28.04■■■□□ 2.08
TRIM41-208ENST00000515499 NCAPD2Q15021 1401 aa28.03■■■□□ 2.08
TRIM41-208ENST00000515499 DIAPH1O60610 1272 aaKnown RBP28.03■■■□□ 2.08
TRIM41-208ENST00000515499 BRWD3Q6RI45 1802 aa28.03■■■□□ 2.08
TRIM41-208ENST00000515499 KRT27Q7Z3Y8 459 aa28.02■■■□□ 2.08
TRIM41-208ENST00000515499 DDB1Q16531 1140 aa28.01■■■□□ 2.07
TRIM41-208ENST00000515499 IGSF1Q8N6C5 1336 aa28■■■□□ 2.07
TRIM41-208ENST00000515499 MYBBP1AQ9BQG0 1328 aaKnown RBP28■■■□□ 2.07
TRIM41-208ENST00000515499 COL3A1P02461 1466 aaPredicted RBP28■■■□□ 2.07
TRIM41-208ENST00000515499 EXOC5O00471 708 aa27.99■■■□□ 2.07
TRIM41-208ENST00000515499 PDE3BQ13370 1112 aa27.99■■■□□ 2.07
TRIM41-208ENST00000515499 RAPGEF4Q8WZA2 1011 aa27.99■■■□□ 2.07
TRIM41-208ENST00000515499 LRRC37A3O60309 1634 aa27.96■■■□□ 2.07
TRIM41-208ENST00000515499 TATP17735 454 aaPredicted RBP27.96■■■□□ 2.07
TRIM41-208ENST00000515499 RGPD1P0DJD0 1748 aa27.95■■■□□ 2.07
TRIM41-208ENST00000515499 MEGF6O75095 1541 aa27.95■■■□□ 2.06
TRIM41-208ENST00000515499 OVOS2A0A0G2JMS6 1433 aa27.93■■■□□ 2.06
TRIM41-208ENST00000515499 TNS2Q63HR2 1409 aa27.93■■■□□ 2.06
TRIM41-208ENST00000515499 ANP32CO43423 234 aa27.93■■■□□ 2.06
TRIM41-208ENST00000515499 NUDCQ9Y266 331 aa27.93■■■□□ 2.06
TRIM41-208ENST00000515499 SULT6B1Q6IMI4 303 aa27.92■■■□□ 2.06
TRIM41-208ENST00000515499 ZCRB1Q8TBF4 217 aaKnown RBP27.92■■■□□ 2.06
TRIM41-208ENST00000515499 KDRP35968 1356 aa27.91■■■□□ 2.06
TRIM41-208ENST00000515499 U2SURPO15042 1029 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms